RNA–Protein interactions for RNA: ENST00000512418.5

CCHCR1-229, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-229ENST00000512418 KIRREL3Q8IZU9 778 aa13.02□□□□□ -0.33
CCHCR1-229ENST00000512418 KBTBD8Q8NFY9 601 aa13.02□□□□□ -0.33
CCHCR1-229ENST00000512418 ZNF75CPQ92670 426 aaPredicted RBP13.02□□□□□ -0.33
CCHCR1-229ENST00000512418 TESCQ96BS2 214 aa13.02□□□□□ -0.33
CCHCR1-229ENST00000512418 POLE3Q9NRF9 147 aa13.02□□□□□ -0.33
CCHCR1-229ENST00000512418 EMC3Q9P0I2 261 aa13.02□□□□□ -0.33
CCHCR1-229ENST00000512418 RAP2CQ9Y3L5 183 aa13.02□□□□□ -0.33
CCHCR1-229ENST00000512418 MAGED1Q9Y5V3 778 aaPredicted RBP13.02□□□□□ -0.33
CCHCR1-229ENST00000512418 SPIN1Q9Y657 262 aaPredicted RBP13.02□□□□□ -0.33
CCHCR1-229ENST00000512418 IGKV3D-15A0A087WSY6 115 aa13.01□□□□□ -0.33
CCHCR1-229ENST00000512418 A0A1W2PP18 115 aa13.01□□□□□ -0.33
CCHCR1-229ENST00000512418 WDR91A4D1P6 747 aa13.01□□□□□ -0.33
CCHCR1-229ENST00000512418 DPRXA6NFQ7 191 aa13.01□□□□□ -0.33
CCHCR1-229ENST00000512418 C9JVG2 144 aa13.01□□□□□ -0.33
CCHCR1-229ENST00000512418 BIRC5O15392 142 aa13.01□□□□□ -0.33
CCHCR1-229ENST00000512418 OR12D1P0DN82 309 aa13.01□□□□□ -0.33
CCHCR1-229ENST00000512418 EDNRAP25101 427 aa13.01□□□□□ -0.33
CCHCR1-229ENST00000512418 APOBEC1P41238 236 aaKnown RBP13.01□□□□□ -0.33
CCHCR1-229ENST00000512418 KHKP50053 298 aa13.01□□□□□ -0.33
CCHCR1-229ENST00000512418 RPL14P50914 215 aaKnown RBP13.01□□□□□ -0.33
CCHCR1-229ENST00000512418 CASP9P55211 416 aa13.01□□□□□ -0.33
CCHCR1-229ENST00000512418 VEZF1Q14119 521 aa13.01□□□□□ -0.33
CCHCR1-229ENST00000512418 PDK3Q15120 406 aa13.01□□□□□ -0.33
CCHCR1-229ENST00000512418 PPA1Q15181 289 aa13.01□□□□□ -0.33
CCHCR1-229ENST00000512418 MAPK14Q16539 360 aa13.01□□□□□ -0.33
CCHCR1-229ENST00000512418 CLEC12BQ2HXU8 276 aa13.01□□□□□ -0.33
CCHCR1-229ENST00000512418 DPY19L1Q2PZI1 675 aa13.01□□□□□ -0.33
CCHCR1-229ENST00000512418 KRT71Q3SY84 523 aa13.01□□□□□ -0.33
CCHCR1-229ENST00000512418 TIMM23BQ5SRD1 257 aa13.01□□□□□ -0.33
CCHCR1-229ENST00000512418 AP1ARQ63HQ0 302 aa13.01□□□□□ -0.33
CCHCR1-229ENST00000512418 WDR93Q6P2C0 686 aa13.01□□□□□ -0.33
CCHCR1-229ENST00000512418 TNFAIP8L2Q6P589 184 aaPredicted RBP13.01□□□□□ -0.33
CCHCR1-229ENST00000512418 MTDHQ86UE4 582 aaKnown RBP13.01□□□□□ -0.33
CCHCR1-229ENST00000512418 P2RY8Q86VZ1 359 aa13.01□□□□□ -0.33
CCHCR1-229ENST00000512418 PRIMA1Q86XR5 153 aa13.01□□□□□ -0.33
CCHCR1-229ENST00000512418 ZNF100Q8IYN0 542 aa13.01□□□□□ -0.33
CCHCR1-229ENST00000512418 LRRC34Q8IZ02 419 aa13.01□□□□□ -0.33
CCHCR1-229ENST00000512418 XAGE5Q8WWM1 108 aa13.01□□□□□ -0.33
CCHCR1-229ENST00000512418 GTPBP3Q969Y2 492 aaKnown RBP13.01□□□□□ -0.33
CCHCR1-229ENST00000512418 ZNF775Q96BV0 537 aaPredicted RBP13.01□□□□□ -0.33
CCHCR1-229ENST00000512418 ROPN1LQ96C74 230 aa13.01□□□□□ -0.33
CCHCR1-229ENST00000512418 MUCL1Q96DR8 90 aa13.01□□□□□ -0.33
CCHCR1-229ENST00000512418 ZHX1-C8orf76Q96EF9 292 aa13.01□□□□□ -0.33
CCHCR1-229ENST00000512418 CCDC106Q9BWC9 280 aa13.01□□□□□ -0.33
CCHCR1-229ENST00000512418 TRIM2Q9C040 744 aa13.01□□□□□ -0.33
CCHCR1-229ENST00000512418 SAP130Q9H0E3 1048 aa13.01□□□□□ -0.33
CCHCR1-229ENST00000512418 SSU72Q9NP77 194 aaKnown RBP13.01□□□□□ -0.33
CCHCR1-229ENST00000512418 CHRNA9Q9UGM1 479 aa13.01□□□□□ -0.33
CCHCR1-229ENST00000512418 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.01□□□□□ -0.33
CCHCR1-229ENST00000512418 ANKRD28O15084 1053 aa13□□□□□ -0.33
CCHCR1-229ENST00000512418 TM9SF1O15321 606 aa13□□□□□ -0.33
CCHCR1-229ENST00000512418 RGS16O15492 202 aaPredicted RBP13□□□□□ -0.33
CCHCR1-229ENST00000512418 CPSF4O95639 269 aaKnown RBP13□□□□□ -0.33
CCHCR1-229ENST00000512418 TFPIP10646 304 aa13□□□□□ -0.33
CCHCR1-229ENST00000512418 GGT1P19440 569 aa13□□□□□ -0.33
CCHCR1-229ENST00000512418 IGHV1-2P23083 117 aa13□□□□□ -0.33
CCHCR1-229ENST00000512418 FKBP2P26885 142 aaKnown RBP13□□□□□ -0.33
CCHCR1-229ENST00000512418 IDUAP35475 653 aa13□□□□□ -0.33
CCHCR1-229ENST00000512418 CLNS1AP54105 237 aaKnown RBP13□□□□□ -0.33
CCHCR1-229ENST00000512418 PHC1P78364 1004 aa13□□□□□ -0.33
CCHCR1-229ENST00000512418 HPCAP84074 193 aa13□□□□□ -0.33
CCHCR1-229ENST00000512418 FUT5Q11128 374 aa13□□□□□ -0.33
CCHCR1-229ENST00000512418 CASP8Q14790 479 aa13□□□□□ -0.33
CCHCR1-229ENST00000512418 PGGHGQ32M88 737 aa13□□□□□ -0.33
CCHCR1-229ENST00000512418 SPANXN4Q5MJ08 99 aa13□□□□□ -0.33
CCHCR1-229ENST00000512418 SAXO2Q658L1 398 aa13□□□□□ -0.33
CCHCR1-229ENST00000512418 FRRS1Q6ZNA5 592 aa13□□□□□ -0.33
CCHCR1-229ENST00000512418 ZC3HAV1Q7Z2W4 902 aaKnown RBP13□□□□□ -0.33
CCHCR1-229ENST00000512418 GRINAQ7Z429 371 aa13□□□□□ -0.33
CCHCR1-229ENST00000512418 MREGQ8N565 214 aa13□□□□□ -0.33
CCHCR1-229ENST00000512418 ZNF563Q8TA94 476 aa13□□□□□ -0.33
CCHCR1-229ENST00000512418 NEUROG1Q92886 237 aa13□□□□□ -0.33
CCHCR1-229ENST00000512418 RAB8BQ92930 207 aa13□□□□□ -0.33
CCHCR1-229ENST00000512418 NEURL3Q96EH8 262 aa13□□□□□ -0.33
CCHCR1-229ENST00000512418 C20orf27Q9GZN8 174 aa13□□□□□ -0.33
CCHCR1-229ENST00000512418 EXOSC3Q9NQT5 275 aaKnown RBP13□□□□□ -0.33
CCHCR1-229ENST00000512418 CTPS2Q9NRF8 586 aa13□□□□□ -0.33
CCHCR1-229ENST00000512418 HAO1Q9UJM8 370 aa13□□□□□ -0.33
CCHCR1-229ENST00000512418 LIPT1Q9Y234 373 aa13□□□□□ -0.33
CCHCR1-229ENST00000512418 CADP27708 2225 aa13□□□□□ -0.33
CCHCR1-229ENST00000512418 OR5H1A6NKK0 313 aa12.99□□□□□ -0.33
CCHCR1-229ENST00000512418 E9PBE3 544 aa12.99□□□□□ -0.33
CCHCR1-229ENST00000512418 DNPH1O43598 174 aa12.99□□□□□ -0.33
CCHCR1-229ENST00000512418 BCAS1O75363 584 aaPredicted RBP12.99□□□□□ -0.33
CCHCR1-229ENST00000512418 PGM3O95394 542 aa12.99□□□□□ -0.33
CCHCR1-229ENST00000512418 PMS2P2O95744 297 aa12.99□□□□□ -0.33
CCHCR1-229ENST00000512418 LBPP18428 481 aa12.99□□□□□ -0.33
CCHCR1-229ENST00000512418 RYKP34925 604 aa12.99□□□□□ -0.33
CCHCR1-229ENST00000512418 CHI3L1P36222 383 aaPredicted RBP12.99□□□□□ -0.33
CCHCR1-229ENST00000512418 CDKN1AP38936 164 aa12.99□□□□□ -0.33
CCHCR1-229ENST00000512418 SLC1A6P48664 564 aa12.99□□□□□ -0.33
CCHCR1-229ENST00000512418 KCNJ10P78508 379 aa12.99□□□□□ -0.33
CCHCR1-229ENST00000512418 FBXW9Q5XUX1 488 aa12.99□□□□□ -0.33
CCHCR1-229ENST00000512418 ARFGAP2Q8N6H7 521 aa12.99□□□□□ -0.33
CCHCR1-229ENST00000512418 SORT1Q99523 831 aa12.99□□□□□ -0.33
CCHCR1-229ENST00000512418 SLC35A5Q9BS91 424 aa12.99□□□□□ -0.33
CCHCR1-229ENST00000512418 NUF2Q9BZD4 464 aa12.99□□□□□ -0.33
CCHCR1-229ENST00000512418 ALG2Q9H553 416 aa12.99□□□□□ -0.33
CCHCR1-229ENST00000512418 FAIMQ9NVQ4 179 aa12.99□□□□□ -0.33
CCHCR1-229ENST00000512418 MARCOQ9UEW3 520 aaPredicted RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 269.5 ms