RNA–Protein interactions for RNA: ENST00000512130.5

LINC01088-209, Transcript of long intergenic non-protein coding RNA 1088, human

TSL 3

Gene LINC01088, Length 525 nt, Biotype antisense RNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC01088-209	ENST00000512130	SURF6	O75683	361 aa	Known RBP	4.21	□□□□□ -1.74
LINC01088-209	ENST00000512130	IGHD	P01880	384 aa		4.21	□□□□□ -1.74
LINC01088-209	ENST00000512130	OR8U8	P0C7N1	319 aa		4.21	□□□□□ -1.74
LINC01088-209	ENST00000512130	POU2F1	P14859	743 aa		4.21	□□□□□ -1.74
LINC01088-209	ENST00000512130	POLR2E	P19388	210 aa	Known RBP	4.21	□□□□□ -1.74
LINC01088-209	ENST00000512130	LEP	P41159	167 aa		4.21	□□□□□ -1.74
LINC01088-209	ENST00000512130	OR3A4P	P47883	348 aa		4.21	□□□□□ -1.74
LINC01088-209	ENST00000512130	HSPA2	P54652	639 aa		4.21	□□□□□ -1.74
LINC01088-209	ENST00000512130	MAJIN	Q3KP22	176 aa		4.21	□□□□□ -1.74
LINC01088-209	ENST00000512130	FILIP1L	Q4L180	1135 aa		4.21	□□□□□ -1.74
LINC01088-209	ENST00000512130	RSBN1	Q5VWQ0	802 aa	Predicted RBP	4.21	□□□□□ -1.74
LINC01088-209	ENST00000512130	TRPM8	Q7Z2W7	1104 aa		4.21	□□□□□ -1.74
LINC01088-209	ENST00000512130	ZNF677	Q86XU0	584 aa		4.21	□□□□□ -1.74
LINC01088-209	ENST00000512130	SVOPL	Q8N434	492 aa		4.21	□□□□□ -1.74
LINC01088-209	ENST00000512130	ZPLD1	Q8TCW7	415 aa		4.21	□□□□□ -1.74
LINC01088-209	ENST00000512130	HTR3C	Q8WXA8	447 aa		4.21	□□□□□ -1.74
LINC01088-209	ENST00000512130	RAPGEF5	Q92565	580 aa		4.21	□□□□□ -1.74
LINC01088-209	ENST00000512130	N4BP2L2	Q92802	583 aa	Predicted RBP	4.21	□□□□□ -1.74
LINC01088-209	ENST00000512130	HAVCR1	Q96D42	359 aa		4.21	□□□□□ -1.74
LINC01088-209	ENST00000512130	MYCBP	Q99417	103 aa	Predicted RBP	4.21	□□□□□ -1.74
LINC01088-209	ENST00000512130	RAB34	Q9BZG1	259 aa		4.21	□□□□□ -1.74
LINC01088-209	ENST00000512130	NMUR2	Q9GZQ4	415 aa		4.21	□□□□□ -1.74
LINC01088-209	ENST00000512130	PTGES2	Q9H7Z7	377 aa		4.21	□□□□□ -1.74
LINC01088-209	ENST00000512130	POPDC2	Q9HBU9	364 aa		4.21	□□□□□ -1.74
LINC01088-209	ENST00000512130	VNN3	Q9NY84	501 aa		4.21	□□□□□ -1.74
LINC01088-209	ENST00000512130		Q9UF83	564 aa		4.21	□□□□□ -1.74
LINC01088-209	ENST00000512130	HPCAL4	Q9UM19	191 aa		4.21	□□□□□ -1.74
LINC01088-209	ENST00000512130	PRPF19	Q9UMS4	504 aa	Known RBP	4.21	□□□□□ -1.74
LINC01088-209	ENST00000512130	MEMO1	Q9Y316	297 aa		4.21	□□□□□ -1.74
LINC01088-209	ENST00000512130	TIMM10B	Q9Y5J6	103 aa		4.21	□□□□□ -1.74
LINC01088-209	ENST00000512130	KANK1	Q14678	1352 aa		4.21	□□□□□ -1.74
LINC01088-209	ENST00000512130	COL2A1	P02458	1487 aa	Predicted RBP	4.21	□□□□□ -1.74
LINC01088-209	ENST00000512130	RPAP1	Q9BWH6	1393 aa	Predicted RBP	4.2	□□□□□ -1.74
LINC01088-209	ENST00000512130	ZNF705E	A8MWA4	302 aa	Predicted RBP	4.2	□□□□□ -1.74
LINC01088-209	ENST00000512130	TRDC	B7Z8K6	153 aa		4.2	□□□□□ -1.74
LINC01088-209	ENST00000512130	HIP1	O00291	1037 aa		4.2	□□□□□ -1.74
LINC01088-209	ENST00000512130	PALM	O75781	387 aa		4.2	□□□□□ -1.74
LINC01088-209	ENST00000512130	SLITRK3	O94933	977 aa		4.2	□□□□□ -1.74
LINC01088-209	ENST00000512130	AP2A1	O95782	977 aa		4.2	□□□□□ -1.74
LINC01088-209	ENST00000512130	LGALS2	P05162	132 aa		4.2	□□□□□ -1.74
LINC01088-209	ENST00000512130	IGLL1	P15814	213 aa		4.2	□□□□□ -1.74
LINC01088-209	ENST00000512130	PSMB1	P20618	241 aa	Known RBP	4.2	□□□□□ -1.74
LINC01088-209	ENST00000512130	HMGB2	P26583	209 aa	Known RBP	4.2	□□□□□ -1.74
LINC01088-209	ENST00000512130	CCT3	P49368	545 aa	Known RBP	4.2	□□□□□ -1.74
LINC01088-209	ENST00000512130	CASP4	P49662	377 aa		4.2	□□□□□ -1.74
LINC01088-209	ENST00000512130	RIPK4	P57078	832 aa		4.2	□□□□□ -1.74
LINC01088-209	ENST00000512130	RPS8	P62241	208 aa	Known RBP	4.2	□□□□□ -1.74
LINC01088-209	ENST00000512130	IGLV3-21	P80748	117 aa	Predicted RBP	4.2	□□□□□ -1.74
LINC01088-209	ENST00000512130	CCDC173	Q0VFZ6	552 aa		4.2	□□□□□ -1.74
LINC01088-209	ENST00000512130	C1orf61	Q13536	156 aa		4.2	□□□□□ -1.74
LINC01088-209	ENST00000512130	ARL6IP1	Q15041	203 aa		4.2	□□□□□ -1.74
LINC01088-209	ENST00000512130	OR4F3	Q6IEY1	312 aa		4.2	□□□□□ -1.74
LINC01088-209	ENST00000512130	WDR74	Q6RFH5	385 aa	Predicted RBP	4.2	□□□□□ -1.74
LINC01088-209	ENST00000512130	CXCL17	Q6UXB2	119 aa		4.2	□□□□□ -1.74
LINC01088-209	ENST00000512130	OR5D13	Q8NGL4	314 aa		4.2	□□□□□ -1.74
LINC01088-209	ENST00000512130	NEIL2	Q969S2	332 aa		4.2	□□□□□ -1.74
LINC01088-209	ENST00000512130	SMIM14	Q96QK8	99 aa		4.2	□□□□□ -1.74
LINC01088-209	ENST00000512130	SRXN1	Q9BYN0	137 aa		4.2	□□□□□ -1.74
LINC01088-209	ENST00000512130	GCOM2	Q9BZD3	368 aa	Predicted RBP	4.2	□□□□□ -1.74
LINC01088-209	ENST00000512130	EHD1	Q9H4M9	534 aa		4.2	□□□□□ -1.74
LINC01088-209	ENST00000512130	ERVW-1	Q9UQF0	538 aa		4.2	□□□□□ -1.74
LINC01088-209	ENST00000512130	IGLV3-10	A0A075B6K4	115 aa		4.19	□□□□□ -1.74
LINC01088-209	ENST00000512130	KLF18	A0A0U1RQI7	1052 aa		4.19	□□□□□ -1.74
LINC01088-209	ENST00000512130	GOLGA8S	H3BPF8	625 aa		4.19	□□□□□ -1.74
LINC01088-209	ENST00000512130	MED7	O43513	233 aa		4.19	□□□□□ -1.74
LINC01088-209	ENST00000512130	PFKFB2	O60825	505 aa		4.19	□□□□□ -1.74
LINC01088-209	ENST00000512130	SEMG1	P04279	462 aa		4.19	□□□□□ -1.74
LINC01088-209	ENST00000512130	ELAVL3	Q14576	367 aa	Known RBP	4.19	□□□□□ -1.74
LINC01088-209	ENST00000512130	ISX	Q2M1V0	245 aa		4.19	□□□□□ -1.74
LINC01088-209	ENST00000512130	SFT2D3	Q587I9	215 aa		4.19	□□□□□ -1.74
LINC01088-209	ENST00000512130	PPP1R27	Q86WC6	154 aa		4.19	□□□□□ -1.74
LINC01088-209	ENST00000512130	FBXO16	Q8IX29	292 aa	Predicted RBP	4.19	□□□□□ -1.74
LINC01088-209	ENST00000512130	CNPY4	Q8N129	248 aa		4.19	□□□□□ -1.74
LINC01088-209	ENST00000512130	LRRC75A-AS1	Q8N1F1	130 aa		4.19	□□□□□ -1.74
LINC01088-209	ENST00000512130	LINC00612	Q8N6U2	182 aa		4.19	□□□□□ -1.74
LINC01088-209	ENST00000512130	OR13C2	Q8NGS9	318 aa		4.19	□□□□□ -1.74
LINC01088-209	ENST00000512130	FAM122A	Q96E09	287 aa		4.19	□□□□□ -1.74
LINC01088-209	ENST00000512130	SEC22A	Q96IW7	307 aa		4.19	□□□□□ -1.74
LINC01088-209	ENST00000512130	COPS8	Q99627	209 aa		4.19	□□□□□ -1.74
LINC01088-209	ENST00000512130	MAPKAP1	Q9BPZ7	522 aa		4.19	□□□□□ -1.74
LINC01088-209	ENST00000512130	ZNF702P	Q9H963	129 aa		4.19	□□□□□ -1.74
LINC01088-209	ENST00000512130	MOK	Q9UQ07	419 aa		4.19	□□□□□ -1.74
LINC01088-209	ENST00000512130	CA5B	Q9Y2D0	317 aa		4.19	□□□□□ -1.74
LINC01088-209	ENST00000512130	POLDIP2	Q9Y2S7	368 aa		4.19	□□□□□ -1.74
LINC01088-209	ENST00000512130	SMAD5-AS1	Q9Y6J3	95 aa		4.19	□□□□□ -1.74
LINC01088-209	ENST00000512130	NISCH	Q9Y2I1	1504 aa		4.19	□□□□□ -1.74
LINC01088-209	ENST00000512130	TNR	Q92752	1358 aa		4.18	□□□□□ -1.74
LINC01088-209	ENST00000512130	IGHV1OR15-1	A0A075B7D0	117 aa		4.18	□□□□□ -1.74
LINC01088-209	ENST00000512130	FAM240B	A0A1B0GVZ2	78 aa		4.18	□□□□□ -1.74
LINC01088-209	ENST00000512130	HELT	A6NFD8	242 aa		4.18	□□□□□ -1.74
LINC01088-209	ENST00000512130	ERI2	A8K979	691 aa	Known RBP	4.18	□□□□□ -1.74
LINC01088-209	ENST00000512130	RGS16	O15492	202 aa	Predicted RBP	4.18	□□□□□ -1.74
LINC01088-209	ENST00000512130	B4GALT2	O60909	372 aa		4.18	□□□□□ -1.74
LINC01088-209	ENST00000512130	SRSF10	O75494	262 aa	Known RBP	4.18	□□□□□ -1.74
LINC01088-209	ENST00000512130	CAPN1	P07384	714 aa		4.18	□□□□□ -1.74
LINC01088-209	ENST00000512130	COX5A	P20674	150 aa		4.18	□□□□□ -1.74
LINC01088-209	ENST00000512130	RDX	P35241	583 aa	Known RBP	4.18	□□□□□ -1.74
LINC01088-209	ENST00000512130	MAP3K8	P41279	467 aa		4.18	□□□□□ -1.74
LINC01088-209	ENST00000512130	MAGEA8	P43361	318 aa		4.18	□□□□□ -1.74
LINC01088-209	ENST00000512130	DIO3	P55073	304 aa		4.18	□□□□□ -1.74

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