RNA–Protein interactions for RNA: ENST00000511978.5

MATR3-218, Transcript of matrin 3, human

TSL 3

Gene MATR3, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-218	ENST00000511978	RAPH1	Q70E73	1250 aa		4.75	□□□□□ -1.65
MATR3-218	ENST00000511978	C17orf64	Q86WR6	236 aa		4.75	□□□□□ -1.65
MATR3-218	ENST00000511978	CSNK1A1L	Q8N752	337 aa		4.75	□□□□□ -1.65
MATR3-218	ENST00000511978	ATL1	Q8WXF7	558 aa		4.75	□□□□□ -1.65
MATR3-218	ENST00000511978	RERG	Q96A58	199 aa	Predicted RBP	4.75	□□□□□ -1.65
MATR3-218	ENST00000511978	PTER	Q96BW5	349 aa		4.75	□□□□□ -1.65
MATR3-218	ENST00000511978	PYCR2	Q96C36	320 aa		4.75	□□□□□ -1.65
MATR3-218	ENST00000511978	C10orf90	Q96M02	699 aa		4.75	□□□□□ -1.65
MATR3-218	ENST00000511978	TSNARE1	Q96NA8	513 aa		4.75	□□□□□ -1.65
MATR3-218	ENST00000511978	PRAP1	Q96NZ9	151 aa		4.75	□□□□□ -1.65
MATR3-218	ENST00000511978	GBP5	Q96PP8	586 aa		4.75	□□□□□ -1.65
MATR3-218	ENST00000511978	OR4K3	Q96R72	315 aa		4.75	□□□□□ -1.65
MATR3-218	ENST00000511978	MRPL1	Q9BYD6	325 aa	Known RBP	4.75	□□□□□ -1.65
MATR3-218	ENST00000511978	NLN	Q9BYT8	704 aa		4.75	□□□□□ -1.65
MATR3-218	ENST00000511978	AKIRIN1	Q9H9L7	192 aa	Predicted RBP	4.75	□□□□□ -1.65
MATR3-218	ENST00000511978	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	4.75	□□□□□ -1.65
MATR3-218	ENST00000511978	STARD5	Q9NSY2	213 aa		4.75	□□□□□ -1.65
MATR3-218	ENST00000511978	CUTC	Q9NTM9	273 aa		4.75	□□□□□ -1.65
MATR3-218	ENST00000511978	TXLNG	Q9NUQ3	528 aa		4.75	□□□□□ -1.65
MATR3-218	ENST00000511978	FAM118A	Q9NWS6	357 aa		4.75	□□□□□ -1.65
MATR3-218	ENST00000511978	NPAP1	Q9NZP6	1156 aa		4.75	□□□□□ -1.65
MATR3-218	ENST00000511978	SNX7	Q9UNH6	387 aa		4.75	□□□□□ -1.65
MATR3-218	ENST00000511978	PADI2	Q9Y2J8	665 aa		4.75	□□□□□ -1.65
MATR3-218	ENST00000511978	IKBKG	Q9Y6K9	419 aa		4.75	□□□□□ -1.65
MATR3-218	ENST00000511978	ACACA	Q13085	2346 aa		4.75	□□□□□ -1.65
MATR3-218	ENST00000511978	ZFHX4	Q86UP3	3567 aa		4.75	□□□□□ -1.65
MATR3-218	ENST00000511978	KNTC1	P50748	2209 aa		4.74	□□□□□ -1.65
MATR3-218	ENST00000511978	FEZF1	A0PJY2	475 aa		4.74	□□□□□ -1.65
MATR3-218	ENST00000511978	HYKK	A2RU49	373 aa		4.74	□□□□□ -1.65
MATR3-218	ENST00000511978		H0YGG7	62 aa		4.74	□□□□□ -1.65
MATR3-218	ENST00000511978	P2RX6	O15547	441 aa		4.74	□□□□□ -1.65
MATR3-218	ENST00000511978	ADAM20	O43506	726 aa		4.74	□□□□□ -1.65
MATR3-218	ENST00000511978	SSX4	O60224	188 aa		4.74	□□□□□ -1.65
MATR3-218	ENST00000511978	KERA	O60938	352 aa		4.74	□□□□□ -1.65
MATR3-218	ENST00000511978	STATH	P02808	62 aa		4.74	□□□□□ -1.65
MATR3-218	ENST00000511978	TPO	P07202	933 aa		4.74	□□□□□ -1.65
MATR3-218	ENST00000511978	CAPN1	P07384	714 aa		4.74	□□□□□ -1.65
MATR3-218	ENST00000511978	RAB40AL	P0C0E4	278 aa		4.74	□□□□□ -1.65
MATR3-218	ENST00000511978	NR2F1	P10589	423 aa		4.74	□□□□□ -1.65
MATR3-218	ENST00000511978	CBL	P22681	906 aa		4.74	□□□□□ -1.65
MATR3-218	ENST00000511978	ANOS1	P23352	680 aa		4.74	□□□□□ -1.65
MATR3-218	ENST00000511978	PTPN4	P29074	926 aa		4.74	□□□□□ -1.65
MATR3-218	ENST00000511978	CRABP2	P29373	138 aa		4.74	□□□□□ -1.65
MATR3-218	ENST00000511978	SLC26A3	P40879	764 aa		4.74	□□□□□ -1.65
MATR3-218	ENST00000511978	MAGEA12	P43365	314 aa		4.74	□□□□□ -1.65
MATR3-218	ENST00000511978	OR1D4	P47884	311 aa		4.74	□□□□□ -1.65
MATR3-218	ENST00000511978	SLC6A12	P48065	614 aa		4.74	□□□□□ -1.65
MATR3-218	ENST00000511978	HNMT	P50135	292 aa		4.74	□□□□□ -1.65
MATR3-218	ENST00000511978	SERPINB9	P50453	376 aa		4.74	□□□□□ -1.65
MATR3-218	ENST00000511978	CSRP3	P50461	194 aa		4.74	□□□□□ -1.65
MATR3-218	ENST00000511978	CCR8	P51685	355 aa		4.74	□□□□□ -1.65
MATR3-218	ENST00000511978	LINC01547	P58512	204 aa	Predicted RBP	4.74	□□□□□ -1.65
MATR3-218	ENST00000511978	KRTAP10-9	P60411	292 aa		4.74	□□□□□ -1.65
MATR3-218	ENST00000511978	RPS15A	P62244	130 aa	Known RBP	4.74	□□□□□ -1.65
MATR3-218	ENST00000511978	RPS15	P62841	145 aa	Known RBP	4.74	□□□□□ -1.65
MATR3-218	ENST00000511978	CSNK1G2	P78368	415 aa		4.74	□□□□□ -1.65
MATR3-218	ENST00000511978	DCD	P81605	110 aa	Known RBP	4.74	□□□□□ -1.65
MATR3-218	ENST00000511978	RELA	Q04206	551 aa		4.74	□□□□□ -1.65
MATR3-218	ENST00000511978	PNRC1	Q12796	327 aa	Predicted RBP	4.74	□□□□□ -1.65
MATR3-218	ENST00000511978	MFAP5	Q13361	173 aa		4.74	□□□□□ -1.65
MATR3-218	ENST00000511978	HKDC1	Q2TB90	917 aa		4.74	□□□□□ -1.65
MATR3-218	ENST00000511978	C18orf21	Q32NC0	220 aa	Predicted RBP	4.74	□□□□□ -1.65
MATR3-218	ENST00000511978	NKAIN1	Q4KMZ8	207 aa		4.74	□□□□□ -1.65
MATR3-218	ENST00000511978	SULT1C3	Q6IMI6	304 aa		4.74	□□□□□ -1.65
MATR3-218	ENST00000511978	COX15	Q7KZN9	410 aa		4.74	□□□□□ -1.65
MATR3-218	ENST00000511978	TRMT10C	Q7L0Y3	403 aa	Known RBP	4.74	□□□□□ -1.65
MATR3-218	ENST00000511978	VN1R4	Q7Z5H5	301 aa		4.74	□□□□□ -1.65
MATR3-218	ENST00000511978	CCDC91	Q7Z6B0	441 aa		4.74	□□□□□ -1.65
MATR3-218	ENST00000511978	TMPRSS11B	Q86T26	416 aa		4.74	□□□□□ -1.65
MATR3-218	ENST00000511978	SYVN1	Q86TM6	617 aa		4.74	□□□□□ -1.65
MATR3-218	ENST00000511978	THOC6	Q86W42	341 aa	Known RBP	4.74	□□□□□ -1.65
MATR3-218	ENST00000511978	PLD3	Q8IV08	490 aa		4.74	□□□□□ -1.65
MATR3-218	ENST00000511978	CENPL	Q8N0S6	344 aa	Predicted RBP	4.74	□□□□□ -1.65
MATR3-218	ENST00000511978	TCAIM	Q8N3R3	496 aa		4.74	□□□□□ -1.65
MATR3-218	ENST00000511978	EIF1AD	Q8N9N8	165 aa	Known RBP	4.74	□□□□□ -1.65
MATR3-218	ENST00000511978	LRRC8C	Q8TDW0	803 aa		4.74	□□□□□ -1.65
MATR3-218	ENST00000511978	DCAKD	Q8WVC6	231 aa		4.74	□□□□□ -1.65
MATR3-218	ENST00000511978	KCTD4	Q8WVF5	259 aa		4.74	□□□□□ -1.65
MATR3-218	ENST00000511978	SLC5A11	Q8WWX8	675 aa		4.74	□□□□□ -1.65
MATR3-218	ENST00000511978	NEIL2	Q969S2	332 aa		4.74	□□□□□ -1.65
MATR3-218	ENST00000511978	CABS1	Q96KC9	395 aa		4.74	□□□□□ -1.65
MATR3-218	ENST00000511978	OR2A5	Q96R48	311 aa		4.74	□□□□□ -1.65
MATR3-218	ENST00000511978	C17orf62	Q9BQA9	187 aa		4.74	□□□□□ -1.65
MATR3-218	ENST00000511978	TXLNGY	Q9BZA5	131 aa		4.74	□□□□□ -1.65
MATR3-218	ENST00000511978	SPNS1	Q9H2V7	528 aa		4.74	□□□□□ -1.65
MATR3-218	ENST00000511978	ALG9	Q9H6U8	611 aa		4.74	□□□□□ -1.65
MATR3-218	ENST00000511978	ANKZF1	Q9H8Y5	726 aa		4.74	□□□□□ -1.65
MATR3-218	ENST00000511978	CNOT10	Q9H9A5	744 aa	Known RBP	4.74	□□□□□ -1.65
MATR3-218	ENST00000511978	NUDT4	Q9NZJ9	180 aa		4.74	□□□□□ -1.65
MATR3-218	ENST00000511978	CD274	Q9NZQ7	290 aa		4.74	□□□□□ -1.65
MATR3-218	ENST00000511978	RHCG	Q9UBD6	479 aa		4.74	□□□□□ -1.65
MATR3-218	ENST00000511978	ACOT9	Q9Y305	439 aa		4.74	□□□□□ -1.65
MATR3-218	ENST00000511978	FER1L5	A0AVI2	2057 aa		4.74	□□□□□ -1.65
MATR3-218	ENST00000511978	DSP	P15924	2871 aa	Known RBP	4.74	□□□□□ -1.65
MATR3-218	ENST00000511978	URB1	O60287	2271 aa	Known RBP	4.74	□□□□□ -1.65
MATR3-218	ENST00000511978	NUP210L	Q5VU65	1888 aa		4.73	□□□□□ -1.65
MATR3-218	ENST00000511978	CACNA1B	Q00975	2339 aa		4.73	□□□□□ -1.65
MATR3-218	ENST00000511978	TRBC2	A0A5B9	178 aa		4.73	□□□□□ -1.65
MATR3-218	ENST00000511978	SYCE1L	A8MT33	242 aa		4.73	□□□□□ -1.65
MATR3-218	ENST00000511978	SUPT3H	B4E1H0	165 aa		4.73	□□□□□ -1.65

Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms