RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 PIGTQ969N2 578 aa4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 COQ2Q96H96 371 aa4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 CAPZA3Q96KX2 299 aa4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 MARK4Q96L34 752 aa4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 ECSITQ9BQ95 431 aa4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 MRPS26Q9BYN8 205 aaKnown RBP4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 PPP1R3EQ9H7J1 279 aa4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 CARS2Q9HA77 564 aaKnown RBP4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 NMUR1Q9HB89 426 aa4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 IFT46Q9NQC8 304 aa4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 PRDM7Q9NQW5 492 aa4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 CTPS2Q9NRF8 586 aa4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 C1GALT1Q9NS00 363 aa4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 GKN1Q9NS71 199 aa4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 SIDT1Q9NXL6 827 aaKnown RBP4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 SPHK1Q9NYA1 384 aa4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 KLQ9UEF7 1012 aa4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 LRP12Q9Y561 859 aa4.63□□□□□ -1.67
TRAPPC11-208ENST00000511955 ZNF840PA6NDX5 716 aa4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 YJEFN3A6XGL0 299 aa4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 PRR33A8MZF0 331 aa4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 HHLA1C9JL84 531 aa4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 RNASEK-C17orf49H0YIS7 233 aa4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 GOSR2O14653 212 aa4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 OR1F1O43749 312 aa4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 SLC28A2O43868 658 aa4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 GMDSO60547 372 aa4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 CCDC22O60826 627 aa4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 RNASEH1O60930 286 aaKnown RBP4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 PSMG1O95456 288 aa4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 ATP1A1P05023 1023 aaKnown RBP4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 HEXAP06865 529 aa4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 CPN1P15169 458 aa4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 PGAM1P18669 254 aa4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 IGFBP5P24593 272 aa4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 C21orf33P30042 268 aaPredicted RBP4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 GKP32189 559 aa4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 CRHR1P34998 444 aa4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 KIR2DL1P43626 348 aaPredicted RBP4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 BLKP51451 505 aa4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 AP2S1P53680 142 aaPredicted RBP4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 TMEM33P57088 247 aa4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 DCDC1P59894 354 aa4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 RPL15P61313 204 aaKnown RBP4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 ESRRGP62508 458 aa4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 VLDLRP98155 873 aa4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 RAD51Q06609 339 aa4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 EFEMP1Q12805 493 aa4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 VAMP3Q15836 100 aa4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 TNXAQ16473 311 aa4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 KLHL12Q53G59 568 aa4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 PRSS36Q5K4E3 855 aa4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 SLX4IPQ5VYV7 408 aa4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 RNF43Q68DV7 783 aa4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 ENPP7Q6UWV6 458 aa4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 LAX1Q8IWV1 398 aa4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 SDR9C7Q8NEX9 313 aa4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 CXorf40AQ8TE69 158 aa4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 ST8SIA2Q92186 375 aa4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 EXOSC8Q96B26 276 aaKnown RBP4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 ZNF486Q96H40 463 aaPredicted RBP4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 CPXM1Q96SM3 734 aa4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 C17orf62Q9BQA9 187 aa4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 ATG101Q9BSB4 218 aa4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 TSSK1BQ9BXA7 367 aa4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 C1QTNF1Q9BXJ1 281 aa4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 PLA2G2FQ9BZM2 168 aa4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 ULBP2Q9BZM5 246 aa4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 NMUR2Q9GZQ4 415 aa4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 ATP13A2Q9NQ11 1180 aa4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 GDF3Q9NR23 364 aa4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 ANKRD10Q9NXR5 420 aa4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 POU2F3Q9UKI9 436 aa4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 NXT1Q9UKK6 140 aaKnown RBP4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 SLC22A13Q9Y226 551 aa4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 NDUFAF1Q9Y375 327 aa4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 CPQQ9Y646 472 aa4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 NCANO14594 1321 aa4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 ELOA3CA0A087WX78 387 aaPredicted RBP4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 C1orf226A1L170 272 aa4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 ELOA3DA6NLF2 546 aaPredicted RBP4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 KPNA4O00629 521 aaPredicted RBP4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 TXNDC9O14530 226 aa4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 RAB29O14966 203 aa4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 NBR2O15453 112 aa4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 MSI1O43347 362 aaKnown RBP4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 EMC8O43402 210 aa4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 SULT1C4O75897 302 aa4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 RCBTB2O95199 551 aa4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 TXNDC12O95881 172 aa4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 RAF1P04049 648 aa4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 ERBB2P04626 1255 aa4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 CHRM4P08173 479 aa4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 SMIM18P0DKX4 95 aa4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 SPP1P10451 314 aa4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 MBL2P11226 248 aaPredicted RBP4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 HLA-GP17693 338 aa4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 PMCHP20382 165 aa4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 ZP3P21754 424 aa4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 S100PP25815 95 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms