RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 EPS8Q12929 822 aa12.51□□□□□ -0.41
DDX41-212ENST00000511040 SCARB2Q14108 478 aa12.51□□□□□ -0.41
DDX41-212ENST00000511040 ADRM1Q16186 407 aa12.51□□□□□ -0.41
DDX41-212ENST00000511040 ZNF311Q5JNZ3 666 aa12.51□□□□□ -0.41
DDX41-212ENST00000511040 C3orf33Q6P1S2 294 aa12.51□□□□□ -0.41
DDX41-212ENST00000511040 GRINAQ7Z429 371 aa12.51□□□□□ -0.41
DDX41-212ENST00000511040 STARD4Q96DR4 205 aa12.51□□□□□ -0.41
DDX41-212ENST00000511040 ANKRD27Q96NW4 1050 aa12.51□□□□□ -0.41
DDX41-212ENST00000511040 ELAC2Q9BQ52 826 aaKnown RBP12.51□□□□□ -0.41
DDX41-212ENST00000511040 CCDC106Q9BWC9 280 aa12.51□□□□□ -0.41
DDX41-212ENST00000511040 RBM24Q9BX46 236 aaKnown RBP12.51□□□□□ -0.41
DDX41-212ENST00000511040 OR11A1Q9GZK7 315 aa12.51□□□□□ -0.41
DDX41-212ENST00000511040 OPN3Q9H1Y3 402 aaPredicted RBP12.51□□□□□ -0.41
DDX41-212ENST00000511040 PIGMQ9H3S5 423 aa12.51□□□□□ -0.41
DDX41-212ENST00000511040 PIF1Q9H611 641 aa12.51□□□□□ -0.41
DDX41-212ENST00000511040 BCL2L10Q9HD36 194 aa12.51□□□□□ -0.41
DDX41-212ENST00000511040 SERINC1Q9NRX5 453 aa12.51□□□□□ -0.41
DDX41-212ENST00000511040 PAQR5Q9NXK6 330 aaPredicted RBP12.51□□□□□ -0.41
DDX41-212ENST00000511040 PACSIN3Q9UKS6 424 aa12.51□□□□□ -0.41
DDX41-212ENST00000511040 ZNF232Q9UNY5 417 aa12.51□□□□□ -0.41
DDX41-212ENST00000511040 CORO2BQ9UQ03 480 aa12.51□□□□□ -0.41
DDX41-212ENST00000511040 GMEB1Q9Y692 573 aa12.51□□□□□ -0.41
DDX41-212ENST00000511040 CAPN7Q9Y6W3 813 aa12.51□□□□□ -0.41
DDX41-212ENST00000511040 TMED7-TICAM2A0A0A6YYA0 188 aa12.5□□□□□ -0.41
DDX41-212ENST00000511040 FRS3O43559 492 aa12.5□□□□□ -0.41
DDX41-212ENST00000511040 CRHP06850 196 aa12.5□□□□□ -0.41
DDX41-212ENST00000511040 PABPC4LP0CB38 370 aaKnown RBP12.5□□□□□ -0.41
DDX41-212ENST00000511040 ENPP1P22413 925 aa12.5□□□□□ -0.41
DDX41-212ENST00000511040 TACR3P29371 465 aa12.5□□□□□ -0.41
DDX41-212ENST00000511040 CPOXP36551 454 aa12.5□□□□□ -0.41
DDX41-212ENST00000511040 HOXC5Q00444 222 aa12.5□□□□□ -0.41
DDX41-212ENST00000511040 MYBPHQ13203 477 aa12.5□□□□□ -0.41
DDX41-212ENST00000511040 ZNF239Q16600 458 aaKnown RBP12.5□□□□□ -0.41
DDX41-212ENST00000511040 CYP51A1Q16850 503 aa12.5□□□□□ -0.41
DDX41-212ENST00000511040 FBXL19-AS1Q494R0 122 aa12.5□□□□□ -0.41
DDX41-212ENST00000511040 MMEL1Q495T6 779 aa12.5□□□□□ -0.41
DDX41-212ENST00000511040 PRAMEF8Q5VWM4 474 aa12.5□□□□□ -0.41
DDX41-212ENST00000511040 PRAMEF7Q5VXH5 474 aa12.5□□□□□ -0.41
DDX41-212ENST00000511040 REP15Q6BDI9 236 aa12.5□□□□□ -0.41
DDX41-212ENST00000511040 REEP3Q6NUK4 255 aa12.5□□□□□ -0.41
DDX41-212ENST00000511040 GDF7Q7Z4P5 450 aa12.5□□□□□ -0.41
DDX41-212ENST00000511040 SERPINA11Q86U17 422 aa12.5□□□□□ -0.41
DDX41-212ENST00000511040 COMTD1Q86VU5 262 aa12.5□□□□□ -0.41
DDX41-212ENST00000511040 ADGRG3Q86Y34 549 aa12.5□□□□□ -0.41
DDX41-212ENST00000511040 CADM2Q8N3J6 435 aa12.5□□□□□ -0.41
DDX41-212ENST00000511040 POU5F2Q8N7G0 328 aa12.5□□□□□ -0.41
DDX41-212ENST00000511040 ABHD3Q8WU67 409 aa12.5□□□□□ -0.41
DDX41-212ENST00000511040 LRRC46Q96FV0 321 aa12.5□□□□□ -0.41
DDX41-212ENST00000511040 SPATA9Q9BWV2 254 aa12.5□□□□□ -0.41
DDX41-212ENST00000511040 RSPO3Q9BXY4 272 aaPredicted RBP12.5□□□□□ -0.41
DDX41-212ENST00000511040 TIGARQ9NQ88 270 aa12.5□□□□□ -0.41
DDX41-212ENST00000511040 GALNT8Q9NY28 637 aa12.5□□□□□ -0.41
DDX41-212ENST00000511040 CHRNA9Q9UGM1 479 aa12.5□□□□□ -0.41
DDX41-212ENST00000511040 TMED7Q9Y3B3 224 aa12.5□□□□□ -0.41
DDX41-212ENST00000511040 TMEM72A0PK05 275 aa12.49□□□□□ -0.41
DDX41-212ENST00000511040 MRASO14807 208 aa12.49□□□□□ -0.41
DDX41-212ENST00000511040 UQCRBP14927 111 aa12.49□□□□□ -0.41
DDX41-212ENST00000511040 SLC6A2P23975 617 aa12.49□□□□□ -0.41
DDX41-212ENST00000511040 APOBEC1P41238 236 aaKnown RBP12.49□□□□□ -0.41
DDX41-212ENST00000511040 ACAA2P42765 397 aaKnown RBP12.49□□□□□ -0.41
DDX41-212ENST00000511040 KIR2DL3P43628 341 aa12.49□□□□□ -0.41
DDX41-212ENST00000511040 POLR2HP52434 150 aaKnown RBP12.49□□□□□ -0.41
DDX41-212ENST00000511040 CTBP2P56545 445 aa12.49□□□□□ -0.41
DDX41-212ENST00000511040 TLE4Q04727 773 aa12.49□□□□□ -0.41
DDX41-212ENST00000511040 GUSBP1Q15486 140 aa12.49□□□□□ -0.41
DDX41-212ENST00000511040 TRMT5Q32P41 509 aaKnown RBP12.49□□□□□ -0.41
DDX41-212ENST00000511040 SYT14P1Q58G82 188 aa12.49□□□□□ -0.41
DDX41-212ENST00000511040 RNF220Q5VTB9 566 aa12.49□□□□□ -0.41
DDX41-212ENST00000511040 SPATA21Q7Z572 469 aa12.49□□□□□ -0.41
DDX41-212ENST00000511040 PTOV1Q86YD1 416 aa12.49□□□□□ -0.41
DDX41-212ENST00000511040 ZZZ3Q8IYH5 903 aa12.49□□□□□ -0.41
DDX41-212ENST00000511040 ZNF440Q8IYI8 595 aa12.49□□□□□ -0.41
DDX41-212ENST00000511040 CPNE4Q96A23 557 aaPredicted RBP12.49□□□□□ -0.41
DDX41-212ENST00000511040 REXO5Q96IC2 774 aaKnown RBP12.49□□□□□ -0.41
DDX41-212ENST00000511040 TMEM38AQ9H6F2 299 aa12.49□□□□□ -0.41
DDX41-212ENST00000511040 CRIM1Q9NZV1 1036 aa12.49□□□□□ -0.41
DDX41-212ENST00000511040 OSGIN1Q9UJX0 560 aa12.49□□□□□ -0.41
DDX41-212ENST00000511040 IFT52Q9Y366 437 aa12.49□□□□□ -0.41
DDX41-212ENST00000511040 CENPEQ02224 2701 aa12.49□□□□□ -0.41
DDX41-212ENST00000511040 A8MXE2 369 aa12.48□□□□□ -0.41
DDX41-212ENST00000511040 FXYD1O00168 92 aa12.48□□□□□ -0.41
DDX41-212ENST00000511040 MSTNO14793 375 aa12.48□□□□□ -0.41
DDX41-212ENST00000511040 TPST1O60507 370 aa12.48□□□□□ -0.41
DDX41-212ENST00000511040 FESP07332 822 aa12.48□□□□□ -0.41
DDX41-212ENST00000511040 ETS2P15036 469 aa12.48□□□□□ -0.41
DDX41-212ENST00000511040 DRD4P21917 467 aa12.48□□□□□ -0.41
DDX41-212ENST00000511040 LSP1P33241 339 aa12.48□□□□□ -0.41
DDX41-212ENST00000511040 SLC1A3P43003 542 aa12.48□□□□□ -0.41
DDX41-212ENST00000511040 DIO1P49895 249 aa12.48□□□□□ -0.41
DDX41-212ENST00000511040 KRTAP10-9P60411 292 aa12.48□□□□□ -0.41
DDX41-212ENST00000511040 GNGT1P63211 74 aa12.48□□□□□ -0.41
DDX41-212ENST00000511040 CYLC2Q14093 348 aaPredicted RBP12.48□□□□□ -0.41
DDX41-212ENST00000511040 MAPRE2Q15555 327 aa12.48□□□□□ -0.41
DDX41-212ENST00000511040 EXOC3L2Q2M3D2 409 aa12.48□□□□□ -0.41
DDX41-212ENST00000511040 GLIPR1L2Q4G1C9 344 aa12.48□□□□□ -0.41
DDX41-212ENST00000511040 RABL3Q5HYI8 236 aa12.48□□□□□ -0.41
DDX41-212ENST00000511040 EEF1A1P5Q5VTE0 462 aa12.48□□□□□ -0.41
DDX41-212ENST00000511040 NANOGP8Q6NSW7 305 aa12.48□□□□□ -0.41
DDX41-212ENST00000511040 ZNF474Q6S9Z5 364 aaPredicted RBP12.48□□□□□ -0.41
DDX41-212ENST00000511040 FCRLAQ7L513 359 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms