RNA–Protein interactions for RNA: ENST00000509277.5

LIMCH1-209, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2 BASIC

Gene LIMCH1, Length 3,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-209ENST00000509277 MPEG1Q2M385 716 aa8.03□□□□□ -1.12
LIMCH1-209ENST00000509277 HYAL4Q2M3T9 481 aa8.03□□□□□ -1.12
LIMCH1-209ENST00000509277 COX20Q5RI15 118 aa8.03□□□□□ -1.12
LIMCH1-209ENST00000509277 ANXA8L1Q5VT79 327 aa8.03□□□□□ -1.12
LIMCH1-209ENST00000509277 ELP2Q6IA86 826 aa8.03□□□□□ -1.12
LIMCH1-209ENST00000509277 METTL21AQ8WXB1 218 aa8.03□□□□□ -1.12
LIMCH1-209ENST00000509277 ZNF583Q96ND8 569 aa8.03□□□□□ -1.12
LIMCH1-209ENST00000509277 NT5DC2Q9H857 520 aa8.03□□□□□ -1.12
LIMCH1-209ENST00000509277 ERVK-19Q9WJR5 959 aa8.03□□□□□ -1.12
LIMCH1-209ENST00000509277 OR10H1Q9Y4A9 318 aa8.03□□□□□ -1.12
LIMCH1-209ENST00000509277 ALPK2Q86TB3 2170 aa8.03□□□□□ -1.12
LIMCH1-209ENST00000509277 DCHS1Q96JQ0 3298 aa8.03□□□□□ -1.12
LIMCH1-209ENST00000509277 A0A1W2PPK0 400 aa8.03□□□□□ -1.12
LIMCH1-209ENST00000509277 TRIM64BA6NI03 449 aa8.03□□□□□ -1.12
LIMCH1-209ENST00000509277 HRKO00198 91 aa8.03□□□□□ -1.12
LIMCH1-209ENST00000509277 SGCEO43556 437 aa8.03□□□□□ -1.12
LIMCH1-209ENST00000509277 HPGDSO60760 199 aa8.03□□□□□ -1.12
LIMCH1-209ENST00000509277 CBX7O95931 251 aa8.03□□□□□ -1.12
LIMCH1-209ENST00000509277 DNASE1P24855 282 aa8.03□□□□□ -1.12
LIMCH1-209ENST00000509277 CSNK2BP67870 215 aa8.03□□□□□ -1.12
LIMCH1-209ENST00000509277 VLDLRP98155 873 aa8.03□□□□□ -1.12
LIMCH1-209ENST00000509277 EEF1A2Q05639 463 aaKnown RBP8.03□□□□□ -1.12
LIMCH1-209ENST00000509277 P2RY14Q15391 338 aa8.03□□□□□ -1.12
LIMCH1-209ENST00000509277 ISXQ2M1V0 245 aa8.03□□□□□ -1.12
LIMCH1-209ENST00000509277 TIMM50Q3ZCQ8 353 aa8.03□□□□□ -1.12
LIMCH1-209ENST00000509277 CCNJQ5T5M9 372 aa8.03□□□□□ -1.12
LIMCH1-209ENST00000509277 DCAF12Q5T6F0 453 aa8.03□□□□□ -1.12
LIMCH1-209ENST00000509277 LCN10Q6JVE6 187 aa8.03□□□□□ -1.12
LIMCH1-209ENST00000509277 CEACAM20Q6UY09 585 aa8.03□□□□□ -1.12
LIMCH1-209ENST00000509277 PRSS48Q7RTY5 328 aa8.03□□□□□ -1.12
LIMCH1-209ENST00000509277 LACC1Q8IV20 430 aa8.03□□□□□ -1.12
LIMCH1-209ENST00000509277 LRRC25Q8N386 305 aaPredicted RBP8.03□□□□□ -1.12
LIMCH1-209ENST00000509277 ANGPTL6Q8NI99 470 aa8.03□□□□□ -1.12
LIMCH1-209ENST00000509277 NANPQ8TBE9 248 aa8.03□□□□□ -1.12
LIMCH1-209ENST00000509277 STT3BQ8TCJ2 826 aa8.03□□□□□ -1.12
LIMCH1-209ENST00000509277 SLC41A2Q96JW4 573 aa8.03□□□□□ -1.12
LIMCH1-209ENST00000509277 UCK1Q9HA47 277 aa8.03□□□□□ -1.12
LIMCH1-209ENST00000509277 LYARQ9NX58 379 aaKnown RBP8.03□□□□□ -1.12
LIMCH1-209ENST00000509277 CMAHPQ9Y471 501 aa8.03□□□□□ -1.12
LIMCH1-209ENST00000509277 NPIPA5A0A0B4J1W7 369 aa8.02□□□□□ -1.12
LIMCH1-209ENST00000509277 NPIPA7E9PJI5 369 aa8.02□□□□□ -1.12
LIMCH1-209ENST00000509277 TNFRSF11BO00300 401 aa8.02□□□□□ -1.12
LIMCH1-209ENST00000509277 SLC28A2O43868 658 aa8.02□□□□□ -1.12
LIMCH1-209ENST00000509277 STK17BO94768 372 aa8.02□□□□□ -1.12
LIMCH1-209ENST00000509277 NPIPA8P0DM63 369 aa8.02□□□□□ -1.12
LIMCH1-209ENST00000509277 OR12D1P0DN82 309 aa8.02□□□□□ -1.12
LIMCH1-209ENST00000509277 NR2F1P10589 423 aa8.02□□□□□ -1.12
LIMCH1-209ENST00000509277 HTR1EP28566 365 aa8.02□□□□□ -1.12
LIMCH1-209ENST00000509277 ZNF33BQ06732 778 aa8.02□□□□□ -1.12
LIMCH1-209ENST00000509277 EXOSC2Q13868 293 aaKnown RBP8.02□□□□□ -1.12
LIMCH1-209ENST00000509277 RPS26P11Q5JNZ5 115 aaPredicted RBP8.02□□□□□ -1.12
LIMCH1-209ENST00000509277 FAM209BQ5JX69 171 aa8.02□□□□□ -1.12
LIMCH1-209ENST00000509277 C16orf47Q6ZP98 133 aaPredicted RBP8.02□□□□□ -1.12
LIMCH1-209ENST00000509277 C10orf111Q8N326 155 aa8.02□□□□□ -1.12
LIMCH1-209ENST00000509277 GGHQ92820 318 aa8.02□□□□□ -1.12
LIMCH1-209ENST00000509277 HSH2DQ96JZ2 352 aa8.02□□□□□ -1.12
LIMCH1-209ENST00000509277 TTTY10Q9BZA0 68 aa8.02□□□□□ -1.12
LIMCH1-209ENST00000509277 PITHD1Q9GZP4 211 aaPredicted RBP8.02□□□□□ -1.12
LIMCH1-209ENST00000509277 HPF1Q9NWY4 346 aa8.02□□□□□ -1.12
LIMCH1-209ENST00000509277 SLC25A37Q9NYZ2 338 aa8.02□□□□□ -1.12
LIMCH1-209ENST00000509277 FBXL2Q9UKC9 423 aa8.02□□□□□ -1.12
LIMCH1-209ENST00000509277 ADAM30Q9UKF2 790 aa8.02□□□□□ -1.12
LIMCH1-209ENST00000509277 MN1Q10571 1320 aaPredicted RBP8.02□□□□□ -1.13
LIMCH1-209ENST00000509277 C2orf92A0A1B0GVN3 265 aa8.02□□□□□ -1.13
LIMCH1-209ENST00000509277 C9J4A7 227 aa8.02□□□□□ -1.13
LIMCH1-209ENST00000509277 GPX5O75715 221 aa8.02□□□□□ -1.13
LIMCH1-209ENST00000509277 BCHEP06276 602 aa8.02□□□□□ -1.13
LIMCH1-209ENST00000509277 ACPPP15309 386 aa8.02□□□□□ -1.13
LIMCH1-209ENST00000509277 ARSBP15848 533 aa8.02□□□□□ -1.13
LIMCH1-209ENST00000509277 PCSK2P16519 638 aa8.02□□□□□ -1.13
LIMCH1-209ENST00000509277 GGT1P19440 569 aa8.02□□□□□ -1.13
LIMCH1-209ENST00000509277 RAB3BP20337 219 aa8.02□□□□□ -1.13
LIMCH1-209ENST00000509277 RPL3P39023 403 aaKnown RBP8.02□□□□□ -1.13
LIMCH1-209ENST00000509277 ATP4BP51164 291 aa8.02□□□□□ -1.13
LIMCH1-209ENST00000509277 GABARAPL2P60520 117 aa8.02□□□□□ -1.13
LIMCH1-209ENST00000509277 SWI5Q1ZZU3 235 aa8.02□□□□□ -1.13
LIMCH1-209ENST00000509277 PRTGQ2VWP7 1150 aa8.02□□□□□ -1.13
LIMCH1-209ENST00000509277 SLC48A1Q6P1K1 146 aa8.02□□□□□ -1.13
LIMCH1-209ENST00000509277 FIGNL1Q6PIW4 674 aa8.02□□□□□ -1.13
LIMCH1-209ENST00000509277 DEF8Q6ZN54 512 aa8.02□□□□□ -1.13
LIMCH1-209ENST00000509277 C6orf120Q7Z4R8 191 aa8.02□□□□□ -1.13
LIMCH1-209ENST00000509277 SLITRK4Q8IW52 837 aa8.02□□□□□ -1.13
LIMCH1-209ENST00000509277 ENTHD1Q8IYW4 607 aa8.02□□□□□ -1.13
LIMCH1-209ENST00000509277 SVOPLQ8N434 492 aa8.02□□□□□ -1.13
LIMCH1-209ENST00000509277 B3GNT7Q8NFL0 401 aa8.02□□□□□ -1.13
LIMCH1-209ENST00000509277 OR6M1Q8NGM8 313 aa8.02□□□□□ -1.13
LIMCH1-209ENST00000509277 NT5CQ8TCD5 201 aa8.02□□□□□ -1.13
LIMCH1-209ENST00000509277 SLC35G5Q96KT7 338 aa8.02□□□□□ -1.13
LIMCH1-209ENST00000509277 RDH12Q96NR8 316 aa8.02□□□□□ -1.13
LIMCH1-209ENST00000509277 ABCG5Q9H222 651 aa8.02□□□□□ -1.13
LIMCH1-209ENST00000509277 PPA2Q9H2U2 334 aa8.02□□□□□ -1.13
LIMCH1-209ENST00000509277 RLIMQ9NVW2 624 aa8.02□□□□□ -1.13
LIMCH1-209ENST00000509277 FAM120CQ9NX05 1096 aaKnown RBP8.02□□□□□ -1.13
LIMCH1-209ENST00000509277 ZNF282Q9UDV7 671 aaPredicted RBP8.02□□□□□ -1.13
LIMCH1-209ENST00000509277 GRIP1Q9Y3R0 1128 aa8.02□□□□□ -1.13
LIMCH1-209ENST00000509277 HMGN2P05204 90 aaKnown RBP8.02□□□□□ -1.13
LIMCH1-209ENST00000509277 SRP9P49458 86 aaKnown RBP8.02□□□□□ -1.13
LIMCH1-209ENST00000509277 ETV1P50549 477 aa8.02□□□□□ -1.13
LIMCH1-209ENST00000509277 BLVRAP53004 296 aa8.02□□□□□ -1.13
LIMCH1-209ENST00000509277 GABREP78334 506 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms