RNA–Protein interactions for RNA: ENST00000509043.1

HTT-205, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 380 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-205ENST00000509043 OCEL1Q9H607 264 aa8.49□□□□□ -1.05
HTT-205ENST00000509043 EXOSC4Q9NPD3 245 aaKnown RBP8.49□□□□□ -1.05
HTT-205ENST00000509043 ATP13A2Q9NQ11 1180 aa8.49□□□□□ -1.05
HTT-205ENST00000509043 ERVK13-1Q9NX77 482 aa8.49□□□□□ -1.05
HTT-205ENST00000509043 POLHQ9Y253 713 aa8.49□□□□□ -1.05
HTT-205ENST00000509043 PCDHGB7Q9Y5F8 929 aa8.49□□□□□ -1.05
HTT-205ENST00000509043 CORINQ9Y5Q5 1042 aa8.49□□□□□ -1.05
HTT-205ENST00000509043 SPIN1Q9Y657 262 aaPredicted RBP8.49□□□□□ -1.05
HTT-205ENST00000509043 MAU2Q9Y6X3 613 aa8.49□□□□□ -1.05
HTT-205ENST00000509043 GOLGA4Q13439 2230 aaKnown RBP8.48□□□□□ -1.05
HTT-205ENST00000509043 SLC35F4A4IF30 521 aa8.48□□□□□ -1.05
HTT-205ENST00000509043 ELOA3DA6NLF2 546 aaPredicted RBP8.48□□□□□ -1.05
HTT-205ENST00000509043 ALG1L2C9J202 215 aa8.48□□□□□ -1.05
HTT-205ENST00000509043 J3QRK9 145 aa8.48□□□□□ -1.05
HTT-205ENST00000509043 PFDN1O60925 122 aa8.48□□□□□ -1.05
HTT-205ENST00000509043 OR7A10O76100 309 aa8.48□□□□□ -1.05
HTT-205ENST00000509043 CH25HO95992 272 aa8.48□□□□□ -1.05
HTT-205ENST00000509043 OCM2P0CE71 109 aa8.48□□□□□ -1.05
HTT-205ENST00000509043 OCMP0CE72 109 aaPredicted RBP8.48□□□□□ -1.05
HTT-205ENST00000509043 TDGF1P13385 188 aa8.48□□□□□ -1.05
HTT-205ENST00000509043 IL12BP29460 328 aa8.48□□□□□ -1.05
HTT-205ENST00000509043 NOS3P29474 1203 aa8.48□□□□□ -1.05
HTT-205ENST00000509043 GRK6P43250 576 aa8.48□□□□□ -1.05
HTT-205ENST00000509043 DUSP3P51452 185 aaPredicted RBP8.48□□□□□ -1.05
HTT-205ENST00000509043 CRYZQ08257 329 aaKnown RBP8.48□□□□□ -1.05
HTT-205ENST00000509043 DMWDQ09019 674 aa8.48□□□□□ -1.05
HTT-205ENST00000509043 ITGADQ13349 1161 aa8.48□□□□□ -1.05
HTT-205ENST00000509043 EFR3AQ14156 821 aa8.48□□□□□ -1.05
HTT-205ENST00000509043 GALEQ14376 348 aa8.48□□□□□ -1.05
HTT-205ENST00000509043 GGTLC2Q14390 218 aa8.48□□□□□ -1.05
HTT-205ENST00000509043 TRIM16LQ309B1 348 aa8.48□□□□□ -1.05
HTT-205ENST00000509043 ELOA3BQ3SY89 546 aa8.48□□□□□ -1.05
HTT-205ENST00000509043 EMC4Q5J8M3 183 aa8.48□□□□□ -1.05
HTT-205ENST00000509043 LIPKQ5VXJ0 399 aa8.48□□□□□ -1.05
HTT-205ENST00000509043 PLBD1Q6P4A8 553 aa8.48□□□□□ -1.05
HTT-205ENST00000509043 ZNF322Q6U7Q0 402 aaPredicted RBP8.48□□□□□ -1.05
HTT-205ENST00000509043 C5orf46Q6UWT4 87 aa8.48□□□□□ -1.05
HTT-205ENST00000509043 ATG4DQ86TL0 474 aaPredicted RBP8.48□□□□□ -1.05
HTT-205ENST00000509043 MEX3DQ86XN8 651 aaKnown RBP8.48□□□□□ -1.05
HTT-205ENST00000509043 SHISA5Q8N114 240 aa8.48□□□□□ -1.05
HTT-205ENST00000509043 METTL27Q8N6F8 245 aaPredicted RBP8.48□□□□□ -1.05
HTT-205ENST00000509043 ZNF441Q8N8Z8 693 aa8.48□□□□□ -1.05
HTT-205ENST00000509043 SLC37A3Q8NCC5 494 aa8.48□□□□□ -1.05
HTT-205ENST00000509043 ELOA3Q8NG57 546 aa8.48□□□□□ -1.05
HTT-205ENST00000509043 HAVCR2Q8TDQ0 301 aa8.48□□□□□ -1.05
HTT-205ENST00000509043 SLC25A46Q96AG3 418 aa8.48□□□□□ -1.05
HTT-205ENST00000509043 WDFY2Q96P53 400 aa8.48□□□□□ -1.05
HTT-205ENST00000509043 TEAD3Q99594 435 aa8.48□□□□□ -1.05
HTT-205ENST00000509043 CCDC32Q9BV29 185 aa8.48□□□□□ -1.05
HTT-205ENST00000509043 MROQ9BYG7 248 aa8.48□□□□□ -1.05
HTT-205ENST00000509043 SLC7A5P2Q9GIP4 190 aa8.48□□□□□ -1.05
HTT-205ENST00000509043 OR8D2Q9GZM6 311 aa8.48□□□□□ -1.05
HTT-205ENST00000509043 VN1R1Q9GZP7 353 aa8.48□□□□□ -1.05
HTT-205ENST00000509043 C6orf62Q9GZU0 229 aaPredicted RBP8.48□□□□□ -1.05
HTT-205ENST00000509043 WWTR1Q9GZV5 400 aa8.48□□□□□ -1.05
HTT-205ENST00000509043 NXF5Q9H1B4 397 aaKnown RBP8.48□□□□□ -1.05
HTT-205ENST00000509043 KCNN2Q9H2S1 579 aa8.48□□□□□ -1.05
HTT-205ENST00000509043 MCCC2Q9HCC0 563 aa8.48□□□□□ -1.05
HTT-205ENST00000509043 TRIM36Q9NQ86 728 aa8.48□□□□□ -1.05
HTT-205ENST00000509043 TXNL4BQ9NX01 149 aaKnown RBP8.48□□□□□ -1.05
HTT-205ENST00000509043 DHCR7Q9UBM7 475 aaKnown RBP8.48□□□□□ -1.05
HTT-205ENST00000509043 PPIEQ9UNP9 301 aaKnown RBP8.48□□□□□ -1.05
HTT-205ENST00000509043 TRAPPC4Q9Y296 219 aa8.48□□□□□ -1.05
HTT-205ENST00000509043 NOX1Q9Y5S8 564 aa8.48□□□□□ -1.05
HTT-205ENST00000509043 NUP210LQ5VU65 1888 aa8.48□□□□□ -1.05
HTT-205ENST00000509043 CEP192Q8TEP8 1941 aa8.48□□□□□ -1.05
HTT-205ENST00000509043 COL5A1P20908 1838 aaPredicted RBP8.47□□□□□ -1.05
HTT-205ENST00000509043 DAPL1A0PJW8 107 aa8.47□□□□□ -1.05
HTT-205ENST00000509043 LAMTOR5O43504 91 aa8.47□□□□□ -1.05
HTT-205ENST00000509043 HYAL3O43820 417 aaPredicted RBP8.47□□□□□ -1.05
HTT-205ENST00000509043 CDC40O60508 579 aaKnown RBP eCLIP8.47□□□□□ -1.05
HTT-205ENST00000509043 TSPAN2O60636 221 aa8.47□□□□□ -1.05
HTT-205ENST00000509043 RFPL3O75679 317 aa8.47□□□□□ -1.05
HTT-205ENST00000509043 UPK1BO75841 260 aa8.47□□□□□ -1.05
HTT-205ENST00000509043 NTN1O95631 604 aa8.47□□□□□ -1.05
HTT-205ENST00000509043 CER1O95813 267 aa8.47□□□□□ -1.05
HTT-205ENST00000509043 MT-ND5P03915 603 aa8.47□□□□□ -1.05
HTT-205ENST00000509043 NAGAP17050 411 aa8.47□□□□□ -1.05
HTT-205ENST00000509043 FUT1P19526 365 aa8.47□□□□□ -1.05
HTT-205ENST00000509043 PGCP20142 388 aa8.47□□□□□ -1.05
HTT-205ENST00000509043 SLC2A5P22732 501 aa8.47□□□□□ -1.05
HTT-205ENST00000509043 F8A1P23610 371 aa8.47□□□□□ -1.05
HTT-205ENST00000509043 NRG3P56975 720 aa8.47□□□□□ -1.05
HTT-205ENST00000509043 RPS4XP62701 263 aaKnown RBP8.47□□□□□ -1.05
HTT-205ENST00000509043 ACTA2P62736 377 aa8.47□□□□□ -1.05
HTT-205ENST00000509043 ACTG2P63267 376 aa8.47□□□□□ -1.05
HTT-205ENST00000509043 ZXDAP98168 799 aa8.47□□□□□ -1.05
HTT-205ENST00000509043 HSF2Q03933 536 aa8.47□□□□□ -1.05
HTT-205ENST00000509043 TRA2AQ13595 282 aaKnown RBP eCLIP8.47□□□□□ -1.05
HTT-205ENST00000509043 OXA1LQ15070 435 aa8.47□□□□□ -1.05
HTT-205ENST00000509043 SNAP47Q5SQN1 464 aa8.47□□□□□ -1.05
HTT-205ENST00000509043 THSD4Q6ZMP0 1018 aa8.47□□□□□ -1.05
HTT-205ENST00000509043 CCDC190Q86UF4 302 aa8.47□□□□□ -1.05
HTT-205ENST00000509043 GATAD2AQ86YP4 633 aa8.47□□□□□ -1.05
HTT-205ENST00000509043 CENPSQ8N2Z9 138 aa8.47□□□□□ -1.05
HTT-205ENST00000509043 OR8K3Q8NH51 312 aa8.47□□□□□ -1.05
HTT-205ENST00000509043 OR51A7Q8NH64 312 aa8.47□□□□□ -1.05
HTT-205ENST00000509043 PHOSPHO1Q8TCT1 267 aa8.47□□□□□ -1.05
HTT-205ENST00000509043 GATAD2BQ8WXI9 593 aa8.47□□□□□ -1.05
HTT-205ENST00000509043 TSLPQ969D9 159 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms