RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 MAT1AQ00266 395 aaKnown RBP10.17□□□□□ -0.78
SH3RF1-203ENST00000508685 MRPL28Q13084 256 aaKnown RBP10.17□□□□□ -0.78
SH3RF1-203ENST00000508685 MAB21L1Q13394 359 aa10.17□□□□□ -0.78
SH3RF1-203ENST00000508685 KCNAB1Q14722 419 aa10.17□□□□□ -0.78
SH3RF1-203ENST00000508685 PRICKLE4Q2TBC4 344 aa10.17□□□□□ -0.78
SH3RF1-203ENST00000508685 ARHGAP11BQ3KRB8 267 aa10.17□□□□□ -0.78
SH3RF1-203ENST00000508685 CLEC12AQ5QGZ9 265 aa10.17□□□□□ -0.78
SH3RF1-203ENST00000508685 HBMQ6B0K9 141 aa10.17□□□□□ -0.78
SH3RF1-203ENST00000508685 SLC30A6Q6NXT4 461 aa10.17□□□□□ -0.78
SH3RF1-203ENST00000508685 FRRS1Q6ZNA5 592 aa10.17□□□□□ -0.78
SH3RF1-203ENST00000508685 ZNF767PQ75MW2 155 aa10.17□□□□□ -0.78
SH3RF1-203ENST00000508685 TRILQ7L0X0 811 aa10.17□□□□□ -0.78
SH3RF1-203ENST00000508685 CXXC5Q7LFL8 322 aaKnown RBP10.17□□□□□ -0.78
SH3RF1-203ENST00000508685 NRMQ8IXM6 262 aa10.17□□□□□ -0.78
SH3RF1-203ENST00000508685 GPALPP1Q8IXQ4 340 aa10.17□□□□□ -0.78
SH3RF1-203ENST00000508685 SLC43A2Q8N370 569 aa10.17□□□□□ -0.78
SH3RF1-203ENST00000508685 OR4F15Q8NGB8 312 aa10.17□□□□□ -0.78
SH3RF1-203ENST00000508685 C17orf50Q8WW18 174 aa10.17□□□□□ -0.78
SH3RF1-203ENST00000508685 DNASE2BQ8WZ79 361 aa10.17□□□□□ -0.78
SH3RF1-203ENST00000508685 ANKRD9Q96BM1 317 aaPredicted RBP10.17□□□□□ -0.78
SH3RF1-203ENST00000508685 FYTTD1Q96QD9 318 aaKnown RBP10.17□□□□□ -0.78
SH3RF1-203ENST00000508685 HDHD5Q9BXW7 423 aa10.17□□□□□ -0.78
SH3RF1-203ENST00000508685 UCK1Q9HA47 277 aa10.17□□□□□ -0.78
SH3RF1-203ENST00000508685 TRIM36Q9NQ86 728 aa10.17□□□□□ -0.78
SH3RF1-203ENST00000508685 TMEM5Q9Y2B1 443 aa10.17□□□□□ -0.78
SH3RF1-203ENST00000508685 ALG5Q9Y673 324 aa10.17□□□□□ -0.78
SH3RF1-203ENST00000508685 RNF215Q9Y6U7 377 aa10.17□□□□□ -0.78
SH3RF1-203ENST00000508685 TP53BP1Q12888 1972 aaPredicted RBP10.17□□□□□ -0.78
SH3RF1-203ENST00000508685 UNC119BA6NIH7 251 aa10.17□□□□□ -0.78
SH3RF1-203ENST00000508685 RHPN2P1A8MT19 583 aa10.17□□□□□ -0.78
SH3RF1-203ENST00000508685 A8MV72 311 aaPredicted RBP10.17□□□□□ -0.78
SH3RF1-203ENST00000508685 GTPBP1O00178 669 aaKnown RBP10.17□□□□□ -0.78
SH3RF1-203ENST00000508685 FOXS1O43638 330 aa10.17□□□□□ -0.78
SH3RF1-203ENST00000508685 RCBTB2O95199 551 aa10.17□□□□□ -0.78
SH3RF1-203ENST00000508685 RBMS1P29558 406 aaKnown RBP10.17□□□□□ -0.78
SH3RF1-203ENST00000508685 AVPR1BP47901 424 aa10.17□□□□□ -0.78
SH3RF1-203ENST00000508685 RAB38P57729 211 aa10.17□□□□□ -0.78
SH3RF1-203ENST00000508685 RRAS2P62070 204 aaPredicted RBP10.17□□□□□ -0.78
SH3RF1-203ENST00000508685 HOXC5Q00444 222 aa10.17□□□□□ -0.78
SH3RF1-203ENST00000508685 CD83Q01151 205 aa10.17□□□□□ -0.78
SH3RF1-203ENST00000508685 MAP4K2Q12851 820 aa10.17□□□□□ -0.78
SH3RF1-203ENST00000508685 DUSP8Q13202 625 aa10.17□□□□□ -0.78
SH3RF1-203ENST00000508685 ERV3-1Q14264 604 aa10.17□□□□□ -0.78
SH3RF1-203ENST00000508685 CREB3L2Q70SY1 520 aa10.17□□□□□ -0.78
SH3RF1-203ENST00000508685 MEPCEQ7L2J0 689 aaKnown RBP10.17□□□□□ -0.78
SH3RF1-203ENST00000508685 NANOGNBQ7Z5D8 188 aa10.17□□□□□ -0.78
SH3RF1-203ENST00000508685 CDK20Q8IZL9 346 aa10.17□□□□□ -0.78
SH3RF1-203ENST00000508685 SLC25A45Q8N413 288 aa10.17□□□□□ -0.78
SH3RF1-203ENST00000508685 YIPF7Q8N8F6 280 aa10.17□□□□□ -0.78
SH3RF1-203ENST00000508685 OR5M3Q8NGP4 307 aa10.17□□□□□ -0.78
SH3RF1-203ENST00000508685 PEX11GQ96HA9 241 aa10.17□□□□□ -0.78
SH3RF1-203ENST00000508685 AHCYL2Q96HN2 611 aaKnown RBP10.17□□□□□ -0.78
SH3RF1-203ENST00000508685 CYSLTR2Q9NS75 346 aa10.17□□□□□ -0.78
SH3RF1-203ENST00000508685 MAT2BQ9NZL9 334 aa10.17□□□□□ -0.78
SH3RF1-203ENST00000508685 LRIT1Q9P2V4 623 aa10.17□□□□□ -0.78
SH3RF1-203ENST00000508685 RABL2AQ9UBK7 228 aaPredicted RBP10.17□□□□□ -0.78
SH3RF1-203ENST00000508685 RABL2BQ9UNT1 228 aa10.17□□□□□ -0.78
SH3RF1-203ENST00000508685 C19orf53Q9UNZ5 99 aaPredicted RBP10.17□□□□□ -0.78
SH3RF1-203ENST00000508685 ZNF443Q9Y2A4 671 aaPredicted RBP10.17□□□□□ -0.78
SH3RF1-203ENST00000508685 A0A0B4J293 547 aa10.16□□□□□ -0.78
SH3RF1-203ENST00000508685 TRAPPC13A5PLN9 417 aa10.16□□□□□ -0.78
SH3RF1-203ENST00000508685 SLC22A31A6NKX4 558 aa10.16□□□□□ -0.78
SH3RF1-203ENST00000508685 INMT-MINDY4F8WBC2 141 aa10.16□□□□□ -0.78
SH3RF1-203ENST00000508685 TGFBR3LH3BV60 316 aa10.16□□□□□ -0.78
SH3RF1-203ENST00000508685 SRPX2O60687 465 aaPredicted RBP10.16□□□□□ -0.78
SH3RF1-203ENST00000508685 FMO6PO60774 539 aa10.16□□□□□ -0.78
SH3RF1-203ENST00000508685 APOL3O95236 402 aa10.16□□□□□ -0.78
SH3RF1-203ENST00000508685 LALBAP00709 142 aa10.16□□□□□ -0.78
SH3RF1-203ENST00000508685 TRHRP34981 398 aaPredicted RBP10.16□□□□□ -0.78
SH3RF1-203ENST00000508685 GABRA4P48169 554 aa10.16□□□□□ -0.78
SH3RF1-203ENST00000508685 OR1D5P58170 312 aa10.16□□□□□ -0.78
SH3RF1-203ENST00000508685 MGAT2Q10469 447 aa10.16□□□□□ -0.78
SH3RF1-203ENST00000508685 HSD17B12Q53GQ0 312 aa10.16□□□□□ -0.78
SH3RF1-203ENST00000508685 OGFOD3Q6PK18 319 aa10.16□□□□□ -0.78
SH3RF1-203ENST00000508685 PAMR1Q6UXH9 720 aa10.16□□□□□ -0.78
SH3RF1-203ENST00000508685 KLBQ86Z14 1044 aa10.16□□□□□ -0.78
SH3RF1-203ENST00000508685 CPOQ8IVL8 374 aa10.16□□□□□ -0.78
SH3RF1-203ENST00000508685 NKAIN4Q8IVV8 208 aa10.16□□□□□ -0.78
SH3RF1-203ENST00000508685 TEX19Q8NA77 164 aa10.16□□□□□ -0.78
SH3RF1-203ENST00000508685 OR7G1Q8NGA0 311 aa10.16□□□□□ -0.78
SH3RF1-203ENST00000508685 SLC2A12Q8TD20 617 aa10.16□□□□□ -0.78
SH3RF1-203ENST00000508685 AKAP1Q92667 903 aaKnown RBP eCLIP10.16□□□□□ -0.78
SH3RF1-203ENST00000508685 RNF31Q96EP0 1072 aa10.16□□□□□ -0.78
SH3RF1-203ENST00000508685 HYLS1Q96M11 299 aa10.16□□□□□ -0.78
SH3RF1-203ENST00000508685 CD180Q99467 661 aa10.16□□□□□ -0.78
SH3RF1-203ENST00000508685 DUSP15Q9H1R2 295 aaPredicted RBP10.16□□□□□ -0.78
SH3RF1-203ENST00000508685 UBQLN3Q9H347 655 aa10.16□□□□□ -0.78
SH3RF1-203ENST00000508685 CAPN10Q9HC96 672 aa10.16□□□□□ -0.78
SH3RF1-203ENST00000508685 BAIAP2Q9UQB8 552 aa10.16□□□□□ -0.78
SH3RF1-203ENST00000508685 TMEM184BQ9Y519 407 aaPredicted RBP10.16□□□□□ -0.78
SH3RF1-203ENST00000508685 CACNA1EQ15878 2313 aa10.16□□□□□ -0.78
SH3RF1-203ENST00000508685 TLCD2A6NGC4 264 aa10.16□□□□□ -0.78
SH3RF1-203ENST00000508685 PLOD3O60568 738 aa10.16□□□□□ -0.78
SH3RF1-203ENST00000508685 SOX30O94993 753 aa10.16□□□□□ -0.78
SH3RF1-203ENST00000508685 NTN1O95631 604 aa10.16□□□□□ -0.78
SH3RF1-203ENST00000508685 DHFRP00374 187 aa10.16□□□□□ -0.78
SH3RF1-203ENST00000508685 MT-ND5P03915 603 aa10.16□□□□□ -0.78
SH3RF1-203ENST00000508685 DBIP07108 87 aaKnown RBP10.16□□□□□ -0.78
SH3RF1-203ENST00000508685 IFI6P09912 130 aa10.16□□□□□ -0.78
SH3RF1-203ENST00000508685 AVPR2P30518 371 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms