RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 MTDHQ86UE4 582 aaKnown RBP8.21□□□□□ -1.1
NEDD9-211ENST00000508546 C17orf78Q8N4C9 275 aa8.21□□□□□ -1.1
NEDD9-211ENST00000508546 C1orf162Q8NEQ5 155 aaPredicted RBP8.21□□□□□ -1.1
NEDD9-211ENST00000508546 TOR1AIP2Q8NFQ8 470 aa8.21□□□□□ -1.1
NEDD9-211ENST00000508546 SEMA6DQ8NFY4 1073 aa8.21□□□□□ -1.1
NEDD9-211ENST00000508546 OR5W2Q8NH69 310 aa8.21□□□□□ -1.1
NEDD9-211ENST00000508546 FBXO30Q8TB52 745 aa8.21□□□□□ -1.1
NEDD9-211ENST00000508546 HPS1Q92902 700 aa8.21□□□□□ -1.1
NEDD9-211ENST00000508546 CIDECQ96AQ7 238 aaPredicted RBP8.21□□□□□ -1.1
NEDD9-211ENST00000508546 FBXO17Q96EF6 278 aa8.21□□□□□ -1.1
NEDD9-211ENST00000508546 L3HYPDHQ96EM0 354 aa8.21□□□□□ -1.1
NEDD9-211ENST00000508546 C16orf58Q96GQ5 468 aa8.21□□□□□ -1.1
NEDD9-211ENST00000508546 OR5B2Q96R09 309 aa8.21□□□□□ -1.1
NEDD9-211ENST00000508546 KCNA7Q96RP8 456 aa8.21□□□□□ -1.1
NEDD9-211ENST00000508546 PAFAH2Q99487 392 aa8.21□□□□□ -1.1
NEDD9-211ENST00000508546 TSPYL1Q9H0U9 437 aa8.21□□□□□ -1.1
NEDD9-211ENST00000508546 PIGUQ9H490 435 aa8.21□□□□□ -1.1
NEDD9-211ENST00000508546 ACSS1Q9NUB1 689 aaPredicted RBP8.21□□□□□ -1.1
NEDD9-211ENST00000508546 ARMCX1Q9P291 453 aa8.21□□□□□ -1.1
NEDD9-211ENST00000508546 AMDHD2Q9Y303 409 aa8.21□□□□□ -1.1
NEDD9-211ENST00000508546 NOSIPQ9Y314 301 aaKnown RBP8.21□□□□□ -1.1
NEDD9-211ENST00000508546 TRAF6Q9Y4K3 522 aa8.21□□□□□ -1.1
NEDD9-211ENST00000508546 ZNF716A6NP11 495 aa8.2□□□□□ -1.1
NEDD9-211ENST00000508546 TRIM49D1C9J1S8 452 aa8.2□□□□□ -1.1
NEDD9-211ENST00000508546 NPIPB9F8W1W9 429 aa8.2□□□□□ -1.1
NEDD9-211ENST00000508546 GTPBP1O00178 669 aaKnown RBP8.2□□□□□ -1.1
NEDD9-211ENST00000508546 EIF4E2O60573 245 aaKnown RBP8.2□□□□□ -1.1
NEDD9-211ENST00000508546 DNAJA2O60884 412 aa8.2□□□□□ -1.1
NEDD9-211ENST00000508546 VENTXO95231 258 aa8.2□□□□□ -1.1
NEDD9-211ENST00000508546 TACSTD2P09758 323 aa8.2□□□□□ -1.1
NEDD9-211ENST00000508546 PRPH2P23942 346 aa8.2□□□□□ -1.1
NEDD9-211ENST00000508546 ATP5F1P24539 256 aaPredicted RBP8.2□□□□□ -1.1
NEDD9-211ENST00000508546 GIFP27352 417 aa8.2□□□□□ -1.1
NEDD9-211ENST00000508546 NTF4P34130 210 aa8.2□□□□□ -1.1
NEDD9-211ENST00000508546 CHN2P52757 468 aa8.2□□□□□ -1.1
NEDD9-211ENST00000508546 SLC16A1P53985 500 aa8.2□□□□□ -1.1
NEDD9-211ENST00000508546 PRKAA2P54646 552 aa8.2□□□□□ -1.1
NEDD9-211ENST00000508546 ATP12AP54707 1039 aa8.2□□□□□ -1.1
NEDD9-211ENST00000508546 FOXG1P55316 489 aaPredicted RBP8.2□□□□□ -1.1
NEDD9-211ENST00000508546 FOXA1P55317 472 aa8.2□□□□□ -1.1
NEDD9-211ENST00000508546 SNRPD2P62316 118 aaKnown RBP8.2□□□□□ -1.1
NEDD9-211ENST00000508546 KIAA0040Q15053 153 aa8.2□□□□□ -1.1
NEDD9-211ENST00000508546 QPRTQ15274 297 aa8.2□□□□□ -1.1
NEDD9-211ENST00000508546 CARTPTQ16568 116 aa8.2□□□□□ -1.1
NEDD9-211ENST00000508546 TIGD2Q4W5G0 525 aa8.2□□□□□ -1.1
NEDD9-211ENST00000508546 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.2□□□□□ -1.1
NEDD9-211ENST00000508546 UGT2A3Q6UWM9 527 aa8.2□□□□□ -1.1
NEDD9-211ENST00000508546 LCA5Q86VQ0 697 aa8.2□□□□□ -1.1
NEDD9-211ENST00000508546 RELL1Q8IUW5 271 aa8.2□□□□□ -1.1
NEDD9-211ENST00000508546 SLC22A9Q8IVM8 553 aa8.2□□□□□ -1.1
NEDD9-211ENST00000508546 C3orf56Q8N813 242 aa8.2□□□□□ -1.1
NEDD9-211ENST00000508546 LINC01356Q8N9X3 169 aa8.2□□□□□ -1.1
NEDD9-211ENST00000508546 SLC25A43Q8WUT9 341 aaPredicted RBP8.2□□□□□ -1.1
NEDD9-211ENST00000508546 UBLCP1Q8WVY7 318 aaPredicted RBP8.2□□□□□ -1.1
NEDD9-211ENST00000508546 ST8SIA1Q92185 356 aa8.2□□□□□ -1.1
NEDD9-211ENST00000508546 JADE3Q92613 823 aa8.2□□□□□ -1.1
NEDD9-211ENST00000508546 C1QTNF6Q9BXI9 259 aa8.2□□□□□ -1.1
NEDD9-211ENST00000508546 TXLNGYQ9BZA5 131 aa8.2□□□□□ -1.1
NEDD9-211ENST00000508546 REEP4Q9H6H4 257 aa8.2□□□□□ -1.1
NEDD9-211ENST00000508546 SLC17A5Q9NRA2 495 aa8.2□□□□□ -1.1
NEDD9-211ENST00000508546 NINJ2Q9NZG7 142 aa8.2□□□□□ -1.1
NEDD9-211ENST00000508546 TMEM216Q9P0N5 145 aa8.2□□□□□ -1.1
NEDD9-211ENST00000508546 METRNQ9UJH8 293 aa8.2□□□□□ -1.1
NEDD9-211ENST00000508546 DCTN4Q9UJW0 460 aa8.2□□□□□ -1.1
NEDD9-211ENST00000508546 ZNF180Q9UJW8 692 aa8.2□□□□□ -1.1
NEDD9-211ENST00000508546 DTNAQ9Y4J8 743 aa8.2□□□□□ -1.1
NEDD9-211ENST00000508546 NPIPA5A0A0B4J1W7 369 aa8.19□□□□□ -1.1
NEDD9-211ENST00000508546 TMEM89A2RUT3 159 aa8.19□□□□□ -1.1
NEDD9-211ENST00000508546 LRP5LA4QPB2 252 aa8.19□□□□□ -1.1
NEDD9-211ENST00000508546 B9A039 149 aa8.19□□□□□ -1.1
NEDD9-211ENST00000508546 NPIPA7E9PJI5 369 aa8.19□□□□□ -1.1
NEDD9-211ENST00000508546 ATP6V1G2-DDX39BF2Z307 99 aa8.19□□□□□ -1.1
NEDD9-211ENST00000508546 H3BQF6 201 aa8.19□□□□□ -1.1
NEDD9-211ENST00000508546 SULT2B1O00204 365 aa8.19□□□□□ -1.1
NEDD9-211ENST00000508546 ZNF264O43296 627 aa8.19□□□□□ -1.1
NEDD9-211ENST00000508546 DNPH1O43598 174 aa8.19□□□□□ -1.1
NEDD9-211ENST00000508546 LILRA1O75019 489 aa8.19□□□□□ -1.1
NEDD9-211ENST00000508546 MRPL33O75394 65 aaKnown RBP8.19□□□□□ -1.1
NEDD9-211ENST00000508546 PDE5AO76074 875 aa8.19□□□□□ -1.1
NEDD9-211ENST00000508546 STAMBPO95630 424 aa8.19□□□□□ -1.1
NEDD9-211ENST00000508546 HMGN2P05204 90 aaKnown RBP8.19□□□□□ -1.1
NEDD9-211ENST00000508546 NPIPA8P0DM63 369 aa8.19□□□□□ -1.1
NEDD9-211ENST00000508546 PCMT1P22061 227 aa8.19□□□□□ -1.1
NEDD9-211ENST00000508546 SERPINF1P36955 418 aa8.19□□□□□ -1.1
NEDD9-211ENST00000508546 CDH15P55291 814 aa8.19□□□□□ -1.1
NEDD9-211ENST00000508546 SLC25A3Q00325 362 aa8.19□□□□□ -1.1
NEDD9-211ENST00000508546 TGFBR3Q03167 851 aa8.19□□□□□ -1.1
NEDD9-211ENST00000508546 PDE7AQ13946 482 aa8.19□□□□□ -1.1
NEDD9-211ENST00000508546 CBFBQ13951 182 aa8.19□□□□□ -1.1
NEDD9-211ENST00000508546 LASP1Q14847 261 aaKnown RBP8.19□□□□□ -1.1
NEDD9-211ENST00000508546 MLC1Q15049 377 aa8.19□□□□□ -1.1
NEDD9-211ENST00000508546 NDUFAF6Q330K2 333 aa8.19□□□□□ -1.1
NEDD9-211ENST00000508546 HSP90B2PQ58FF3 399 aa8.19□□□□□ -1.1
NEDD9-211ENST00000508546 SYT14P1Q58G82 188 aa8.19□□□□□ -1.1
NEDD9-211ENST00000508546 ANKRD26P1Q6NSI1 321 aa8.19□□□□□ -1.1
NEDD9-211ENST00000508546 CDC73Q6P1J9 531 aa8.19□□□□□ -1.1
NEDD9-211ENST00000508546 SLC46A3Q7Z3Q1 461 aa8.19□□□□□ -1.1
NEDD9-211ENST00000508546 ANKS4BQ8N8V4 417 aa8.19□□□□□ -1.1
NEDD9-211ENST00000508546 PIGXQ8TBF5 258 aa8.19□□□□□ -1.1
NEDD9-211ENST00000508546 DCAKDQ8WVC6 231 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms