RNA–Protein interactions for RNA: ENST00000508308.1

HMGN1P16-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 16, humanhuman

BASIC

Gene HMGN1P16, Length 283 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P16-201ENST00000508308 IGHV1-2P23083 117 aa5.68□□□□□ -1.5
HMGN1P16-201ENST00000508308 MAPK1P28482 360 aa5.68□□□□□ -1.5
HMGN1P16-201ENST00000508308 PGM1P36871 562 aa5.68□□□□□ -1.5
HMGN1P16-201ENST00000508308 ACVR1BP36896 505 aa5.68□□□□□ -1.5
HMGN1P16-201ENST00000508308 RPL3P39023 403 aaKnown RBP5.68□□□□□ -1.5
HMGN1P16-201ENST00000508308 FOXG1P55316 489 aaPredicted RBP5.68□□□□□ -1.5
HMGN1P16-201ENST00000508308 CLDN8P56748 225 aa5.68□□□□□ -1.5
HMGN1P16-201ENST00000508308 SESN3P58005 492 aa5.68□□□□□ -1.5
HMGN1P16-201ENST00000508308 RPS4XP62701 263 aaKnown RBP5.68□□□□□ -1.5
HMGN1P16-201ENST00000508308 EMX2Q04743 252 aa5.68□□□□□ -1.5
HMGN1P16-201ENST00000508308 SELENBP1Q13228 472 aa5.68□□□□□ -1.5
HMGN1P16-201ENST00000508308 MPP2Q14168 576 aa5.68□□□□□ -1.5
HMGN1P16-201ENST00000508308 CLEC12BQ2HXU8 276 aa5.68□□□□□ -1.5
HMGN1P16-201ENST00000508308 ARHGAP11BQ3KRB8 267 aa5.68□□□□□ -1.5
HMGN1P16-201ENST00000508308 LSM12Q3MHD2 195 aaKnown RBP5.68□□□□□ -1.5
HMGN1P16-201ENST00000508308 SPDYE7PQ495Y7 208 aa5.68□□□□□ -1.5
HMGN1P16-201ENST00000508308 ATP6AP1LQ52LC2 224 aa5.68□□□□□ -1.5
HMGN1P16-201ENST00000508308 OR4F3Q6IEY1 312 aa5.68□□□□□ -1.5
HMGN1P16-201ENST00000508308 BHLHA15Q7RTS1 189 aaPredicted RBP5.68□□□□□ -1.5
HMGN1P16-201ENST00000508308 HMGN2P46Q86SG4 172 aa5.68□□□□□ -1.5
HMGN1P16-201ENST00000508308 ZNF614Q8N883 585 aa5.68□□□□□ -1.5
HMGN1P16-201ENST00000508308 FNDC5Q8NAU1 212 aa5.68□□□□□ -1.5
HMGN1P16-201ENST00000508308 RFWD2Q8NHY2 731 aa5.68□□□□□ -1.5
HMGN1P16-201ENST00000508308 MIPOL1Q8TD10 442 aa5.68□□□□□ -1.5
HMGN1P16-201ENST00000508308 KISS1RQ969F8 398 aaPredicted RBP5.68□□□□□ -1.5
HMGN1P16-201ENST00000508308 FBXW5Q969U6 566 aa5.68□□□□□ -1.5
HMGN1P16-201ENST00000508308 TRAF4Q9BUZ4 470 aaPredicted RBP5.68□□□□□ -1.5
HMGN1P16-201ENST00000508308 THUMPD3Q9BV44 507 aaKnown RBP5.68□□□□□ -1.5
HMGN1P16-201ENST00000508308 REG4Q9BYZ8 158 aa5.68□□□□□ -1.5
HMGN1P16-201ENST00000508308 ZNF350Q9GZX5 532 aa5.68□□□□□ -1.5
HMGN1P16-201ENST00000508308 LAT2Q9GZY6 243 aa5.68□□□□□ -1.5
HMGN1P16-201ENST00000508308 SAP130Q9H0E3 1048 aa5.68□□□□□ -1.5
HMGN1P16-201ENST00000508308 SLCO5A1Q9H2Y9 848 aa5.68□□□□□ -1.5
HMGN1P16-201ENST00000508308 CXorf56Q9H5V9 222 aa5.68□□□□□ -1.5
HMGN1P16-201ENST00000508308 AKTIPQ9H8T0 292 aa5.68□□□□□ -1.5
HMGN1P16-201ENST00000508308 EML4Q9HC35 981 aaKnown RBP5.68□□□□□ -1.5
HMGN1P16-201ENST00000508308 TIGARQ9NQ88 270 aa5.68□□□□□ -1.5
HMGN1P16-201ENST00000508308 ASIC5Q9NY37 505 aa5.68□□□□□ -1.5
HMGN1P16-201ENST00000508308 MID2Q9UJV3 735 aa5.68□□□□□ -1.5
HMGN1P16-201ENST00000508308 GDF2Q9UK05 429 aaPredicted RBP5.68□□□□□ -1.5
HMGN1P16-201ENST00000508308 MKLN1Q9UL63 735 aa5.68□□□□□ -1.5
HMGN1P16-201ENST00000508308 FAF1Q9UNN5 650 aaPredicted RBP5.68□□□□□ -1.5
HMGN1P16-201ENST00000508308 LIPT1Q9Y234 373 aa5.68□□□□□ -1.5
HMGN1P16-201ENST00000508308 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.67□□□□□ -1.5
HMGN1P16-201ENST00000508308 IGKV3D-15A0A087WSY6 115 aa5.67□□□□□ -1.5
HMGN1P16-201ENST00000508308 CLDN24A6NM45 220 aa5.67□□□□□ -1.5
HMGN1P16-201ENST00000508308 GJE1A6NN92 205 aa5.67□□□□□ -1.5
HMGN1P16-201ENST00000508308 ZNF724A8MTY0 619 aa5.67□□□□□ -1.5
HMGN1P16-201ENST00000508308 H3BNH8 94 aa5.67□□□□□ -1.5
HMGN1P16-201ENST00000508308 KIAA0513O60268 411 aa5.67□□□□□ -1.5
HMGN1P16-201ENST00000508308 STX11O75558 287 aa5.67□□□□□ -1.5
HMGN1P16-201ENST00000508308 IGHV3-9P01782 118 aa5.67□□□□□ -1.5
HMGN1P16-201ENST00000508308 FESP07332 822 aa5.67□□□□□ -1.5
HMGN1P16-201ENST00000508308 CD3EP07766 207 aa5.67□□□□□ -1.5
HMGN1P16-201ENST00000508308 KRT16P08779 473 aa5.67□□□□□ -1.5
HMGN1P16-201ENST00000508308 OR12D1P0DN82 309 aa5.67□□□□□ -1.5
HMGN1P16-201ENST00000508308 MATN1P21941 496 aa5.67□□□□□ -1.5
HMGN1P16-201ENST00000508308 IL32P24001 234 aa5.67□□□□□ -1.5
HMGN1P16-201ENST00000508308 SLC7A1P30825 629 aa5.67□□□□□ -1.5
HMGN1P16-201ENST00000508308 SERPINB5P36952 375 aa5.67□□□□□ -1.5
HMGN1P16-201ENST00000508308 DIO1P49895 249 aa5.67□□□□□ -1.5
HMGN1P16-201ENST00000508308 CCR4P51679 360 aa5.67□□□□□ -1.5
HMGN1P16-201ENST00000508308 VSNL1P62760 191 aa5.67□□□□□ -1.5
HMGN1P16-201ENST00000508308 SPOCK1Q08629 439 aa5.67□□□□□ -1.5
HMGN1P16-201ENST00000508308 RASGEF1BQ0VAM2 473 aa5.67□□□□□ -1.5
HMGN1P16-201ENST00000508308 MERTKQ12866 999 aa5.67□□□□□ -1.5
HMGN1P16-201ENST00000508308 CBFBQ13951 182 aa5.67□□□□□ -1.5
HMGN1P16-201ENST00000508308 GPR68Q15743 365 aa5.67□□□□□ -1.5
HMGN1P16-201ENST00000508308 PGS1Q32NB8 556 aa5.67□□□□□ -1.5
HMGN1P16-201ENST00000508308 ABLIM2Q6H8Q1 611 aa5.67□□□□□ -1.5
HMGN1P16-201ENST00000508308 TYW3Q6IPR3 259 aaKnown RBP5.67□□□□□ -1.5
HMGN1P16-201ENST00000508308 C11orf71Q6IPW1 123 aa5.67□□□□□ -1.5
HMGN1P16-201ENST00000508308 EMBQ6PCB8 327 aa5.67□□□□□ -1.5
HMGN1P16-201ENST00000508308 LYPD4Q6UWN0 246 aa5.67□□□□□ -1.5
HMGN1P16-201ENST00000508308 FRRS1Q6ZNA5 592 aa5.67□□□□□ -1.5
HMGN1P16-201ENST00000508308 TMPPEQ6ZT21 453 aa5.67□□□□□ -1.5
HMGN1P16-201ENST00000508308 CXXC5Q7LFL8 322 aaKnown RBP5.67□□□□□ -1.5
HMGN1P16-201ENST00000508308 MTDHQ86UE4 582 aaKnown RBP5.67□□□□□ -1.5
HMGN1P16-201ENST00000508308 DTX2Q86UW9 622 aa5.67□□□□□ -1.5
HMGN1P16-201ENST00000508308 ANKRD46Q86W74 232 aa5.67□□□□□ -1.5
HMGN1P16-201ENST00000508308 ADGRG3Q86Y34 549 aa5.67□□□□□ -1.5
HMGN1P16-201ENST00000508308 SLC43A2Q8N370 569 aa5.67□□□□□ -1.5
HMGN1P16-201ENST00000508308 NATD1Q8N6N6 113 aa5.67□□□□□ -1.5
HMGN1P16-201ENST00000508308 ZNF433Q8N7K0 673 aaPredicted RBP5.67□□□□□ -1.5
HMGN1P16-201ENST00000508308 ZNF781Q8N8C0 355 aa5.67□□□□□ -1.5
HMGN1P16-201ENST00000508308 TOR1AIP2Q8NFQ8 470 aa5.67□□□□□ -1.5
HMGN1P16-201ENST00000508308 OR8J2Q8NGG1 315 aa5.67□□□□□ -1.5
HMGN1P16-201ENST00000508308 AENQ8WTP8 325 aaKnown RBP5.67□□□□□ -1.5
HMGN1P16-201ENST00000508308 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.67□□□□□ -1.5
HMGN1P16-201ENST00000508308 ST8SIA1Q92185 356 aa5.67□□□□□ -1.5
HMGN1P16-201ENST00000508308 RAB8BQ92930 207 aa5.67□□□□□ -1.5
HMGN1P16-201ENST00000508308 MOAP1Q96BY2 351 aa5.67□□□□□ -1.5
HMGN1P16-201ENST00000508308 TUBGCP3Q96CW5 907 aa5.67□□□□□ -1.5
HMGN1P16-201ENST00000508308 DNAJA3Q96EY1 480 aa5.67□□□□□ -1.5
HMGN1P16-201ENST00000508308 REXO5Q96IC2 774 aaKnown RBP5.67□□□□□ -1.5
HMGN1P16-201ENST00000508308 ARL5BQ96KC2 179 aa5.67□□□□□ -1.5
HMGN1P16-201ENST00000508308 PKNOX2Q96KN3 472 aa5.67□□□□□ -1.5
HMGN1P16-201ENST00000508308 TEX37Q96LM6 180 aa5.67□□□□□ -1.5
HMGN1P16-201ENST00000508308 PPP1R36Q96LQ0 422 aa5.67□□□□□ -1.5
HMGN1P16-201ENST00000508308 OR5B2Q96R09 309 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms