RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 VSTM2LQ96N03 204 aa13.36□□□□□ -0.27
DDX41-208ENST00000507955 UCKL1Q9NWZ5 548 aa13.36□□□□□ -0.27
DDX41-208ENST00000507955 A0A0B4J2E0 115 aa13.35□□□□□ -0.27
DDX41-208ENST00000507955 A0A1B0GX12 115 aa13.35□□□□□ -0.27
DDX41-208ENST00000507955 CENPXA8MT69 81 aa13.35□□□□□ -0.27
DDX41-208ENST00000507955 CASKO14936 926 aa13.35□□□□□ -0.27
DDX41-208ENST00000507955 CT45A8P0DMV1 189 aa13.35□□□□□ -0.27
DDX41-208ENST00000507955 CT45A9P0DMV2 189 aa13.35□□□□□ -0.27
DDX41-208ENST00000507955 BMP8BP34820 402 aa13.35□□□□□ -0.27
DDX41-208ENST00000507955 RPS5P46782 204 aaKnown RBP13.35□□□□□ -0.27
DDX41-208ENST00000507955 FOXL2P58012 376 aa13.35□□□□□ -0.27
DDX41-208ENST00000507955 DSG2Q14126 1118 aa13.35□□□□□ -0.27
DDX41-208ENST00000507955 CRMP1Q14194 572 aa13.35□□□□□ -0.27
DDX41-208ENST00000507955 UBXN2BQ14CS0 331 aa13.35□□□□□ -0.27
DDX41-208ENST00000507955 P2RY14Q15391 338 aa13.35□□□□□ -0.27
DDX41-208ENST00000507955 CT45A2Q5DJT8 189 aa13.35□□□□□ -0.27
DDX41-208ENST00000507955 DDI2Q5TDH0 399 aa13.35□□□□□ -0.27
DDX41-208ENST00000507955 PRPF38BQ5VTL8 546 aaKnown RBP13.35□□□□□ -0.27
DDX41-208ENST00000507955 ZNF322Q6U7Q0 402 aaPredicted RBP13.35□□□□□ -0.27
DDX41-208ENST00000507955 KIRREL2Q6UWL6 708 aa13.35□□□□□ -0.27
DDX41-208ENST00000507955 BMP8AQ7Z5Y6 402 aa13.35□□□□□ -0.27
DDX41-208ENST00000507955 OAFQ86UD1 273 aa13.35□□□□□ -0.27
DDX41-208ENST00000507955 MARCH9Q86YJ5 346 aa13.35□□□□□ -0.27
DDX41-208ENST00000507955 ASCC1Q8N9N2 400 aaKnown RBP13.35□□□□□ -0.27
DDX41-208ENST00000507955 BRIX1Q8TDN6 353 aaKnown RBP13.35□□□□□ -0.27
DDX41-208ENST00000507955 KISS1RQ969F8 398 aaPredicted RBP13.35□□□□□ -0.27
DDX41-208ENST00000507955 KLHDC3Q9BQ90 382 aa13.35□□□□□ -0.27
DDX41-208ENST00000507955 TMEM246Q9BRR3 403 aa13.35□□□□□ -0.27
DDX41-208ENST00000507955 TEX12Q9BXU0 123 aa13.35□□□□□ -0.27
DDX41-208ENST00000507955 PPIL3Q9H2H8 161 aaKnown RBP13.35□□□□□ -0.27
DDX41-208ENST00000507955 TMEM27Q9HBJ8 222 aa13.35□□□□□ -0.27
DDX41-208ENST00000507955 PRTFDC1Q9NRG1 225 aa13.35□□□□□ -0.27
DDX41-208ENST00000507955 EXOGQ9Y2C4 368 aaKnown RBP13.35□□□□□ -0.27
DDX41-208ENST00000507955 CCDC182A6NF36 153 aa13.35□□□□□ -0.27
DDX41-208ENST00000507955 C17orf51A8MQB3 221 aa13.35□□□□□ -0.27
DDX41-208ENST00000507955 GABRPO00591 440 aa13.35□□□□□ -0.27
DDX41-208ENST00000507955 IGLV3-19P01714 112 aa13.35□□□□□ -0.27
DDX41-208ENST00000507955 PROS1P07225 676 aa13.35□□□□□ -0.27
DDX41-208ENST00000507955 RNH1P13489 461 aaKnown RBP13.35□□□□□ -0.27
DDX41-208ENST00000507955 PAICSP22234 425 aaKnown RBP13.35□□□□□ -0.27
DDX41-208ENST00000507955 GABRA5P31644 462 aa13.35□□□□□ -0.27
DDX41-208ENST00000507955 OR1D4P47884 311 aa13.35□□□□□ -0.27
DDX41-208ENST00000507955 SNAP47Q5SQN1 464 aa13.35□□□□□ -0.27
DDX41-208ENST00000507955 SYT13Q7L8C5 426 aa13.35□□□□□ -0.27
DDX41-208ENST00000507955 KLHL36Q8N4N3 616 aa13.35□□□□□ -0.27
DDX41-208ENST00000507955 FN3KQ9H479 309 aa13.35□□□□□ -0.27
DDX41-208ENST00000507955 B3GAT2Q9NPZ5 323 aa13.35□□□□□ -0.27
DDX41-208ENST00000507955 C4orf47A7E2U8 309 aa13.34□□□□□ -0.27
DDX41-208ENST00000507955 HPGDSO60760 199 aa13.34□□□□□ -0.27
DDX41-208ENST00000507955 IGHA1P01876 353 aa13.34□□□□□ -0.27
DDX41-208ENST00000507955 HMGN1P05114 100 aa13.34□□□□□ -0.27
DDX41-208ENST00000507955 ALAS2P22557 587 aa13.34□□□□□ -0.27
DDX41-208ENST00000507955 MYL9P24844 172 aa13.34□□□□□ -0.27
DDX41-208ENST00000507955 CAPZBP47756 277 aa13.34□□□□□ -0.27
DDX41-208ENST00000507955 BLKP51451 505 aa13.34□□□□□ -0.27
DDX41-208ENST00000507955 CD83Q01151 205 aa13.34□□□□□ -0.27
DDX41-208ENST00000507955 FHL1Q13642 323 aa13.34□□□□□ -0.27
DDX41-208ENST00000507955 PAMR1Q6UXH9 720 aa13.34□□□□□ -0.27
DDX41-208ENST00000507955 TMEM91Q6ZNR0 172 aa13.34□□□□□ -0.27
DDX41-208ENST00000507955 MEPCEQ7L2J0 689 aaKnown RBP13.34□□□□□ -0.27
DDX41-208ENST00000507955 ARIH2OSQ8N7S6 290 aa13.34□□□□□ -0.27
DDX41-208ENST00000507955 GDPD1Q8N9F7 314 aa13.34□□□□□ -0.27
DDX41-208ENST00000507955 SENP5Q96HI0 755 aaPredicted RBP13.34□□□□□ -0.27
DDX41-208ENST00000507955 DEPDC7Q96QD5 511 aa13.34□□□□□ -0.27
DDX41-208ENST00000507955 TEAD3Q99594 435 aa13.34□□□□□ -0.27
DDX41-208ENST00000507955 MED18Q9BUE0 208 aa13.34□□□□□ -0.27
DDX41-208ENST00000507955 ALG8Q9BVK2 526 aa13.34□□□□□ -0.27
DDX41-208ENST00000507955 ADAM18Q9Y3Q7 739 aa13.34□□□□□ -0.27
DDX41-208ENST00000507955 OR10H1Q9Y4A9 318 aa13.34□□□□□ -0.27
DDX41-208ENST00000507955 MPDZO75970 2070 aa13.34□□□□□ -0.27
DDX41-208ENST00000507955 RP1P56715 2156 aa13.34□□□□□ -0.27
DDX41-208ENST00000507955 J3QRE1 110 aa13.34□□□□□ -0.27
DDX41-208ENST00000507955 SCO2O43819 266 aa13.34□□□□□ -0.27
DDX41-208ENST00000507955 SERPINI2O75830 405 aa13.34□□□□□ -0.27
DDX41-208ENST00000507955 CD38P28907 300 aa13.34□□□□□ -0.27
DDX41-208ENST00000507955 ZNHIT3Q15649 155 aaPredicted RBP13.34□□□□□ -0.27
DDX41-208ENST00000507955 GARNL3Q5VVW2 1013 aa13.34□□□□□ -0.27
DDX41-208ENST00000507955 ZCCHC12Q6PEW1 402 aa13.34□□□□□ -0.27
DDX41-208ENST00000507955 SSX6Q7RTT6 188 aa13.34□□□□□ -0.27
DDX41-208ENST00000507955 NR2C2APQ86WQ0 139 aa13.34□□□□□ -0.27
DDX41-208ENST00000507955 CDK20Q8IZL9 346 aa13.34□□□□□ -0.27
DDX41-208ENST00000507955 LNX2Q8N448 690 aa13.34□□□□□ -0.27
DDX41-208ENST00000507955 OR4K13Q8NH42 304 aa13.34□□□□□ -0.27
DDX41-208ENST00000507955 OR51Q1Q8NH59 317 aa13.34□□□□□ -0.27
DDX41-208ENST00000507955 ZNF524Q96C55 264 aa13.34□□□□□ -0.27
DDX41-208ENST00000507955 DGAT2Q96PD7 388 aa13.34□□□□□ -0.27
DDX41-208ENST00000507955 FREM2Q5SZK8 3169 aa13.34□□□□□ -0.27
DDX41-208ENST00000507955 MBTPS2O43462 519 aa13.33□□□□□ -0.28
DDX41-208ENST00000507955 CTNSO60931 367 aa13.33□□□□□ -0.28
DDX41-208ENST00000507955 PTP4A3O75365 173 aa13.33□□□□□ -0.28
DDX41-208ENST00000507955 CSNK1EP49674 416 aaKnown RBP13.33□□□□□ -0.28
DDX41-208ENST00000507955 E2F1Q01094 437 aa13.33□□□□□ -0.28
DDX41-208ENST00000507955 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.33□□□□□ -0.28
DDX41-208ENST00000507955 CNIH2Q6PI25 160 aa13.33□□□□□ -0.28
DDX41-208ENST00000507955 CD200R1LQ6Q8B3 271 aa13.33□□□□□ -0.28
DDX41-208ENST00000507955 TMPRSS11FQ6ZWK6 438 aa13.33□□□□□ -0.28
DDX41-208ENST00000507955 PRSS58Q8IYP2 241 aa13.33□□□□□ -0.28
DDX41-208ENST00000507955 SDR9C7Q8NEX9 313 aa13.33□□□□□ -0.28
DDX41-208ENST00000507955 NEIL3Q8TAT5 605 aa13.33□□□□□ -0.28
DDX41-208ENST00000507955 UBASH3BQ8TF42 649 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms