RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 ZNF337Q9Y3M9 751 aa18.15■□□□□ 0.5
USP53-203ENST00000507597 ELOA3DA6NLF2 546 aaPredicted RBP18.14■□□□□ 0.49
USP53-203ENST00000507597 FIGNL2A6NMB9 653 aa18.14■□□□□ 0.49
USP53-203ENST00000507597 AHRRA9YTQ3 701 aa18.14■□□□□ 0.49
USP53-203ENST00000507597 B4DXG7 233 aa18.14■□□□□ 0.49
USP53-203ENST00000507597 NPIPA2E9PIF3 369 aa18.14■□□□□ 0.49
USP53-203ENST00000507597 NPIPA3F8WFD2 350 aa18.14■□□□□ 0.49
USP53-203ENST00000507597 ZNF208O43345 1280 aa18.14■□□□□ 0.49
USP53-203ENST00000507597 OR5F1O95221 314 aa18.14■□□□□ 0.49
USP53-203ENST00000507597 NTN1O95631 604 aa18.14■□□□□ 0.49
USP53-203ENST00000507597 GPIP06744 558 aa18.14■□□□□ 0.49
USP53-203ENST00000507597 CPN1P15169 458 aa18.14■□□□□ 0.49
USP53-203ENST00000507597 SLC7A1P30825 629 aa18.14■□□□□ 0.49
USP53-203ENST00000507597 SMIM11AP58511 58 aa18.14■□□□□ 0.49
USP53-203ENST00000507597 B3GALT5-AS1P59052 145 aa18.14■□□□□ 0.49
USP53-203ENST00000507597 HOXC5Q00444 222 aa18.14■□□□□ 0.49
USP53-203ENST00000507597 ST3GAL3Q11203 375 aa18.14■□□□□ 0.49
USP53-203ENST00000507597 ELOA3BQ3SY89 546 aa18.14■□□□□ 0.49
USP53-203ENST00000507597 ESPNLQ6ZVH7 1005 aa18.14■□□□□ 0.49
USP53-203ENST00000507597 LILRA2Q8N149 483 aa18.14■□□□□ 0.49
USP53-203ENST00000507597 ELOA3Q8NG57 546 aa18.14■□□□□ 0.49
USP53-203ENST00000507597 ADAMTS16Q8TE57 1224 aa18.14■□□□□ 0.49
USP53-203ENST00000507597 MPP4Q96JB8 637 aa18.14■□□□□ 0.49
USP53-203ENST00000507597 ZNF347Q96SE7 839 aa18.14■□□□□ 0.49
USP53-203ENST00000507597 TIMP4Q99727 224 aa18.14■□□□□ 0.49
USP53-203ENST00000507597 CTPS2Q9NRF8 586 aa18.14■□□□□ 0.49
USP53-203ENST00000507597 LIPGQ9Y5X9 500 aa18.14■□□□□ 0.49
USP53-203ENST00000507597 TMED7-TICAM2A0A0A6YYA0 188 aa18.13■□□□□ 0.49
USP53-203ENST00000507597 A0A1B0GWA3 101 aa18.13■□□□□ 0.49
USP53-203ENST00000507597 WDR1O75083 606 aa18.13■□□□□ 0.49
USP53-203ENST00000507597 FABP3P05413 133 aa18.13■□□□□ 0.49
USP53-203ENST00000507597 TPOP07202 933 aa18.13■□□□□ 0.49
USP53-203ENST00000507597 RHCEP18577 417 aa18.13■□□□□ 0.49
USP53-203ENST00000507597 ATP6V1B2P21281 511 aa18.13■□□□□ 0.49
USP53-203ENST00000507597 CRYZQ08257 329 aaKnown RBP18.13■□□□□ 0.49
USP53-203ENST00000507597 POMZP3Q6PJE2 187 aa18.13■□□□□ 0.49
USP53-203ENST00000507597 ZNF605Q86T29 641 aa18.13■□□□□ 0.49
USP53-203ENST00000507597 OR10Q1Q8NGQ4 319 aa18.13■□□□□ 0.49
USP53-203ENST00000507597 FAM57AQ8TBR7 257 aa18.13■□□□□ 0.49
USP53-203ENST00000507597 POC1BQ8TC44 478 aa18.13■□□□□ 0.49
USP53-203ENST00000507597 SMPDL3BQ92485 455 aa18.13■□□□□ 0.49
USP53-203ENST00000507597 MIB2Q96AX9 1013 aa18.13■□□□□ 0.49
USP53-203ENST00000507597 RSRC1Q96IZ7 334 aaKnown RBP18.13■□□□□ 0.49
USP53-203ENST00000507597 PRRC1Q96M27 445 aa18.13■□□□□ 0.49
USP53-203ENST00000507597 EPYCQ99645 322 aa18.13■□□□□ 0.49
USP53-203ENST00000507597 FNDC11Q9BVV2 318 aa18.13■□□□□ 0.49
USP53-203ENST00000507597 IL1RAPQ9NPH3 570 aa18.13■□□□□ 0.49
USP53-203ENST00000507597 OSGIN1Q9UJX0 560 aa18.13■□□□□ 0.49
USP53-203ENST00000507597 CAMK2AQ9UQM7 478 aa18.13■□□□□ 0.49
USP53-203ENST00000507597 TMED7Q9Y3B3 224 aa18.13■□□□□ 0.49
USP53-203ENST00000507597 ENPP4Q9Y6X5 453 aa18.13■□□□□ 0.49
USP53-203ENST00000507597 A0A0B4J2E0 115 aa18.12■□□□□ 0.49
USP53-203ENST00000507597 A0A1B0GX12 115 aa18.12■□□□□ 0.49
USP53-203ENST00000507597 CPSF4LA6NMK7 179 aaKnown RBP18.12■□□□□ 0.49
USP53-203ENST00000507597 A8MVM7 634 aa18.12■□□□□ 0.49
USP53-203ENST00000507597 CHP2O43745 196 aa18.12■□□□□ 0.49
USP53-203ENST00000507597 ADAM11O75078 769 aa18.12■□□□□ 0.49
USP53-203ENST00000507597 TFPIP10646 304 aa18.12■□□□□ 0.49
USP53-203ENST00000507597 LHX2P50458 406 aa18.12■□□□□ 0.49
USP53-203ENST00000507597 OR5M1Q8NGP8 315 aa18.12■□□□□ 0.49
USP53-203ENST00000507597 STK35Q8TDR2 534 aa18.12■□□□□ 0.49
USP53-203ENST00000507597 SLC38A4Q969I6 547 aa18.12■□□□□ 0.49
USP53-203ENST00000507597 C3orf49Q96BT1 292 aa18.12■□□□□ 0.49
USP53-203ENST00000507597 SLC41A3Q96GZ6 507 aa18.12■□□□□ 0.49
USP53-203ENST00000507597 KLHL15Q96M94 604 aa18.12■□□□□ 0.49
USP53-203ENST00000507597 HS6ST2Q96MM7 605 aa18.12■□□□□ 0.49
USP53-203ENST00000507597 SEPHS2Q99611 448 aa18.12■□□□□ 0.49
USP53-203ENST00000507597 AMBRA1Q9C0C7 1298 aa18.12■□□□□ 0.49
USP53-203ENST00000507597 PRDM14Q9GZV8 571 aa18.12■□□□□ 0.49
USP53-203ENST00000507597 HDGFL3Q9Y3E1 203 aa18.12■□□□□ 0.49
USP53-203ENST00000507597 V9GYQ6 96 aa18.12■□□□□ 0.49
USP53-203ENST00000507597 IGSF10Q6WRI0 2623 aa18.12■□□□□ 0.49
USP53-203ENST00000507597 DHRS12A0PJE2 317 aa18.11■□□□□ 0.49
USP53-203ENST00000507597 TMEM229AB2RXF0 380 aa18.11■□□□□ 0.49
USP53-203ENST00000507597 H0Y3Z8 333 aa18.11■□□□□ 0.49
USP53-203ENST00000507597 SLC19A2O60779 497 aa18.11■□□□□ 0.49
USP53-203ENST00000507597 RAP2AP10114 183 aa18.11■□□□□ 0.49
USP53-203ENST00000507597 NQO1P15559 274 aaKnown RBP18.11■□□□□ 0.49
USP53-203ENST00000507597 ZNF708P17019 499 aa18.11■□□□□ 0.49
USP53-203ENST00000507597 TNFRSF1BP20333 461 aa18.11■□□□□ 0.49
USP53-203ENST00000507597 HTR2AP28223 471 aa18.11■□□□□ 0.49
USP53-203ENST00000507597 CSNK2A1P68400 391 aaPredicted RBP18.11■□□□□ 0.49
USP53-203ENST00000507597 HSF1Q00613 529 aa18.11■□□□□ 0.49
USP53-203ENST00000507597 SGCBQ16585 318 aa18.11■□□□□ 0.49
USP53-203ENST00000507597 GXYLT1Q4G148 440 aa18.11■□□□□ 0.49
USP53-203ENST00000507597 TTC33Q6PID6 262 aaPredicted RBP18.11■□□□□ 0.49
USP53-203ENST00000507597 ATG4DQ86TL0 474 aaPredicted RBP18.11■□□□□ 0.49
USP53-203ENST00000507597 COMTD1Q86VU5 262 aa18.11■□□□□ 0.49
USP53-203ENST00000507597 ADGRG3Q86Y34 549 aa18.11■□□□□ 0.49
USP53-203ENST00000507597 LACC1Q8IV20 430 aa18.11■□□□□ 0.49
USP53-203ENST00000507597 ZDHHC21Q8IVQ6 265 aa18.11■□□□□ 0.49
USP53-203ENST00000507597 ATP6V1C2Q8NEY4 427 aa18.11■□□□□ 0.49
USP53-203ENST00000507597 ZPLD1Q8TCW7 415 aa18.11■□□□□ 0.49
USP53-203ENST00000507597 ZHX1-C8orf76Q96EF9 292 aa18.11■□□□□ 0.49
USP53-203ENST00000507597 ZNF300Q96RE9 604 aaPredicted RBP18.11■□□□□ 0.49
USP53-203ENST00000507597 RSPO3Q9BXY4 272 aaPredicted RBP18.11■□□□□ 0.49
USP53-203ENST00000507597 POTEKPQ9BYX7 375 aa18.11■□□□□ 0.49
USP53-203ENST00000507597 TP63Q9H3D4 680 aaPredicted RBP18.11■□□□□ 0.49
USP53-203ENST00000507597 ALKBH4Q9NXW9 302 aa18.11■□□□□ 0.49
USP53-203ENST00000507597 SPRR3Q9UBC9 169 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms