RNA–Protein interactions for RNA: ENST00000506971.1

CALCOCO2-208, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 3

Gene CALCOCO2, Length 519 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-208ENST00000506971 NDST2P52849 883 aa3.85□□□□□ -1.79
CALCOCO2-208ENST00000506971 CTSCP53634 463 aa3.85□□□□□ -1.79
CALCOCO2-208ENST00000506971 RAB10P61026 200 aa3.85□□□□□ -1.79
CALCOCO2-208ENST00000506971 RPP38P78345 283 aaKnown RBP3.85□□□□□ -1.79
CALCOCO2-208ENST00000506971 MRPS6P82932 125 aaKnown RBP3.85□□□□□ -1.79
CALCOCO2-208ENST00000506971 MAT1AQ00266 395 aaKnown RBP3.85□□□□□ -1.79
CALCOCO2-208ENST00000506971 KDSRQ06136 332 aa3.85□□□□□ -1.79
CALCOCO2-208ENST00000506971 FOXM1Q08050 763 aa3.85□□□□□ -1.79
CALCOCO2-208ENST00000506971 TGM3Q08188 693 aa3.85□□□□□ -1.79
CALCOCO2-208ENST00000506971 SMARCB1Q12824 385 aa3.85□□□□□ -1.79
CALCOCO2-208ENST00000506971 MAB21L1Q13394 359 aa3.85□□□□□ -1.79
CALCOCO2-208ENST00000506971 DYNC1I2Q13409 638 aaKnown RBP3.85□□□□□ -1.79
CALCOCO2-208ENST00000506971 ITGA9Q13797 1035 aa3.85□□□□□ -1.79
CALCOCO2-208ENST00000506971 FAM83EQ2M2I3 478 aa3.85□□□□□ -1.79
CALCOCO2-208ENST00000506971 COQ5Q5HYK3 327 aa3.85□□□□□ -1.79
CALCOCO2-208ENST00000506971 SPANXN2Q5MJ10 180 aa3.85□□□□□ -1.79
CALCOCO2-208ENST00000506971 METTL11BQ5VVY1 283 aa3.85□□□□□ -1.79
CALCOCO2-208ENST00000506971 PRMT9Q6P2P2 845 aa3.85□□□□□ -1.79
CALCOCO2-208ENST00000506971 NIPAL3Q6P499 406 aa3.85□□□□□ -1.79
CALCOCO2-208ENST00000506971 CBLN3Q6UW01 205 aa3.85□□□□□ -1.79
CALCOCO2-208ENST00000506971 EPGNQ6UW88 154 aa3.85□□□□□ -1.79
CALCOCO2-208ENST00000506971 HACD2Q6Y1H2 254 aa3.85□□□□□ -1.79
CALCOCO2-208ENST00000506971 ERASQ7Z444 233 aa3.85□□□□□ -1.79
CALCOCO2-208ENST00000506971 UBQLNLQ8IYU4 475 aa3.85□□□□□ -1.79
CALCOCO2-208ENST00000506971 PGAM4Q8N0Y7 254 aa3.85□□□□□ -1.79
CALCOCO2-208ENST00000506971 BEST3Q8N1M1 668 aa3.85□□□□□ -1.79
CALCOCO2-208ENST00000506971 COMMD1Q8N668 190 aa3.85□□□□□ -1.79
CALCOCO2-208ENST00000506971 METTL27Q8N6F8 245 aaPredicted RBP3.85□□□□□ -1.79
CALCOCO2-208ENST00000506971 ICA1LQ8NDH6 482 aa3.85□□□□□ -1.79
CALCOCO2-208ENST00000506971 BBS1Q8NFJ9 593 aa3.85□□□□□ -1.79
CALCOCO2-208ENST00000506971 OR9K2Q8NGE7 335 aa3.85□□□□□ -1.79
CALCOCO2-208ENST00000506971 TRMT10AQ8TBZ6 339 aaKnown RBP3.85□□□□□ -1.79
CALCOCO2-208ENST00000506971 EMG1Q92979 244 aaKnown RBP3.85□□□□□ -1.79
CALCOCO2-208ENST00000506971 WBP2Q969T9 261 aa3.85□□□□□ -1.79
CALCOCO2-208ENST00000506971 PYCR2Q96C36 320 aa3.85□□□□□ -1.79
CALCOCO2-208ENST00000506971 GRAMD2BQ96HH9 432 aa3.85□□□□□ -1.79
CALCOCO2-208ENST00000506971 LRR1Q96L50 414 aa3.85□□□□□ -1.79
CALCOCO2-208ENST00000506971 GUCD1Q96NT3 240 aa3.85□□□□□ -1.79
CALCOCO2-208ENST00000506971 RAB40CQ96S21 281 aa3.85□□□□□ -1.79
CALCOCO2-208ENST00000506971 CYP2S1Q96SQ9 504 aa3.85□□□□□ -1.79
CALCOCO2-208ENST00000506971 LGMNQ99538 433 aa3.85□□□□□ -1.79
CALCOCO2-208ENST00000506971 TSC22D3Q99576 134 aa3.85□□□□□ -1.79
CALCOCO2-208ENST00000506971 IL12RB2Q99665 862 aa3.85□□□□□ -1.79
CALCOCO2-208ENST00000506971 C19orf43Q9BQ61 176 aa3.85□□□□□ -1.79
CALCOCO2-208ENST00000506971 ECSITQ9BQ95 431 aa3.85□□□□□ -1.79
CALCOCO2-208ENST00000506971 MRPL57Q9BQC6 102 aaKnown RBP3.85□□□□□ -1.79
CALCOCO2-208ENST00000506971 THTPAQ9BU02 230 aa3.85□□□□□ -1.79
CALCOCO2-208ENST00000506971 SLC2A11Q9BYW1 496 aa3.85□□□□□ -1.79
CALCOCO2-208ENST00000506971 PRRG4Q9BZD6 226 aa3.85□□□□□ -1.79
CALCOCO2-208ENST00000506971 TRIM15Q9C019 465 aa3.85□□□□□ -1.79
CALCOCO2-208ENST00000506971 NACA2Q9H009 215 aa3.85□□□□□ -1.79
CALCOCO2-208ENST00000506971 CSTL1Q9H114 145 aa3.85□□□□□ -1.79
CALCOCO2-208ENST00000506971 KCNN2Q9H2S1 579 aa3.85□□□□□ -1.79
CALCOCO2-208ENST00000506971 DPEP3Q9H4B8 488 aa3.85□□□□□ -1.79
CALCOCO2-208ENST00000506971 FBXO44Q9H4M3 255 aa3.85□□□□□ -1.79
CALCOCO2-208ENST00000506971 EFCAB1Q9HAE3 211 aa3.85□□□□□ -1.79
CALCOCO2-208ENST00000506971 S100A14Q9HCY8 104 aa3.85□□□□□ -1.79
CALCOCO2-208ENST00000506971 ZNF334Q9HCZ1 680 aaPredicted RBP3.85□□□□□ -1.79
CALCOCO2-208ENST00000506971 RAB9BQ9NP90 201 aa3.85□□□□□ -1.79
CALCOCO2-208ENST00000506971 C20orf96Q9NUD7 363 aaPredicted RBP3.85□□□□□ -1.79
CALCOCO2-208ENST00000506971 GPATCH2LQ9NWQ4 482 aa3.85□□□□□ -1.79
CALCOCO2-208ENST00000506971 OR12D3Q9UGF7 316 aa3.85□□□□□ -1.79
CALCOCO2-208ENST00000506971 EMCNQ9ULC0 261 aa3.85□□□□□ -1.79
CALCOCO2-208ENST00000506971 RAB26Q9ULW5 256 aa3.85□□□□□ -1.79
CALCOCO2-208ENST00000506971 PSMD13Q9UNM6 376 aa3.85□□□□□ -1.79
CALCOCO2-208ENST00000506971 GBF1Q92538 1859 aa3.85□□□□□ -1.79
CALCOCO2-208ENST00000506971 GREB1Q4ZG55 1949 aa3.84□□□□□ -1.79
CALCOCO2-208ENST00000506971 GLTPD2A6NH11 291 aa3.84□□□□□ -1.79
CALCOCO2-208ENST00000506971 ANKRD66B4E2M5 251 aa3.84□□□□□ -1.79
CALCOCO2-208ENST00000506971 FAM90A26D6RGX4 464 aa3.84□□□□□ -1.79
CALCOCO2-208ENST00000506971 ZNF587BE7ETH6 402 aa3.84□□□□□ -1.79
CALCOCO2-208ENST00000506971 NPIPA3F8WFD2 350 aa3.84□□□□□ -1.79
CALCOCO2-208ENST00000506971 G3V2L1 256 aa3.84□□□□□ -1.79
CALCOCO2-208ENST00000506971 ZNF195O14628 629 aa3.84□□□□□ -1.79
CALCOCO2-208ENST00000506971 YKT6O15498 198 aa3.84□□□□□ -1.79
CALCOCO2-208ENST00000506971 ZG16O60844 167 aa3.84□□□□□ -1.79
CALCOCO2-208ENST00000506971 RFPL2O75678 378 aa3.84□□□□□ -1.79
CALCOCO2-208ENST00000506971 SYNGR4O95473 234 aa3.84□□□□□ -1.79
CALCOCO2-208ENST00000506971 EPOP01588 193 aa3.84□□□□□ -1.79
CALCOCO2-208ENST00000506971 CA3P07451 260 aa3.84□□□□□ -1.79
CALCOCO2-208ENST00000506971 CHRNGP07510 517 aa3.84□□□□□ -1.79
CALCOCO2-208ENST00000506971 PABPC4LP0CB38 370 aaKnown RBP3.84□□□□□ -1.79
CALCOCO2-208ENST00000506971 DBTP11182 482 aaKnown RBP3.84□□□□□ -1.79
CALCOCO2-208ENST00000506971 COX4I1P13073 169 aa3.84□□□□□ -1.79
CALCOCO2-208ENST00000506971 GNSP15586 552 aa3.84□□□□□ -1.79
CALCOCO2-208ENST00000506971 ZNF44P15621 663 aa3.84□□□□□ -1.79
CALCOCO2-208ENST00000506971 ME2P23368 584 aa3.84□□□□□ -1.79
CALCOCO2-208ENST00000506971 OR1D2P34982 312 aa3.84□□□□□ -1.79
CALCOCO2-208ENST00000506971 DLSTP36957 453 aa3.84□□□□□ -1.79
CALCOCO2-208ENST00000506971 RPL10AP62906 217 aaKnown RBP3.84□□□□□ -1.79
CALCOCO2-208ENST00000506971 ILF3Q12906 894 aaKnown RBP eCLIP3.84□□□□□ -1.79
CALCOCO2-208ENST00000506971 PLA2G7Q13093 441 aa3.84□□□□□ -1.79
CALCOCO2-208ENST00000506971 NME3Q13232 169 aa3.84□□□□□ -1.79
CALCOCO2-208ENST00000506971 VEZF1Q14119 521 aa3.84□□□□□ -1.79
CALCOCO2-208ENST00000506971 SELPLGQ14242 412 aa3.84□□□□□ -1.79
CALCOCO2-208ENST00000506971 RBBP7Q16576 425 aa3.84□□□□□ -1.79
CALCOCO2-208ENST00000506971 UPP1Q16831 310 aa3.84□□□□□ -1.79
CALCOCO2-208ENST00000506971 PARP15Q460N3 678 aa3.84□□□□□ -1.79
CALCOCO2-208ENST00000506971 NKAIN1Q4KMZ8 207 aa3.84□□□□□ -1.79
CALCOCO2-208ENST00000506971 PDLIM3Q53GG5 364 aaPredicted RBP3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms