RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 A0A0A6YYD5 115 aa15.83■□□□□ 0.12
SQSTM1-211ENST00000506690 FEZF1A0PJY2 475 aa15.83■□□□□ 0.12
SQSTM1-211ENST00000506690 MAN2B1O00754 1011 aa15.83■□□□□ 0.12
SQSTM1-211ENST00000506690 OGG1O15527 345 aa15.83■□□□□ 0.12
SQSTM1-211ENST00000506690 KHDRBS3O75525 346 aaKnown RBP15.83■□□□□ 0.12
SQSTM1-211ENST00000506690 SIX6O95475 246 aa15.83■□□□□ 0.12
SQSTM1-211ENST00000506690 NAT2P11245 290 aa15.83■□□□□ 0.12
SQSTM1-211ENST00000506690 PTNP21246 168 aa15.83■□□□□ 0.12
SQSTM1-211ENST00000506690 TEAD1P28347 426 aa15.83■□□□□ 0.12
SQSTM1-211ENST00000506690 NTSP30990 170 aa15.83■□□□□ 0.12
SQSTM1-211ENST00000506690 OR52L1Q8NGH7 329 aa15.83■□□□□ 0.12
SQSTM1-211ENST00000506690 SMAP2Q8WU79 429 aaPredicted RBP15.83■□□□□ 0.12
SQSTM1-211ENST00000506690 FCAMRQ8WWV6 532 aa15.83■□□□□ 0.12
SQSTM1-211ENST00000506690 SLC25A38Q96DW6 304 aa15.83■□□□□ 0.12
SQSTM1-211ENST00000506690 BBS4Q96RK4 519 aa15.83■□□□□ 0.12
SQSTM1-211ENST00000506690 DNTTIP1Q9H147 329 aa15.83■□□□□ 0.12
SQSTM1-211ENST00000506690 CMC2Q9NRP2 79 aa15.83■□□□□ 0.12
SQSTM1-211ENST00000506690 TAC3Q9UHF0 121 aa15.83■□□□□ 0.12
SQSTM1-211ENST00000506690 A0A1B0GTQ1 180 aa15.82■□□□□ 0.12
SQSTM1-211ENST00000506690 LEFTY1O75610 366 aa15.82■□□□□ 0.12
SQSTM1-211ENST00000506690 PRG2P13727 222 aa15.82■□□□□ 0.12
SQSTM1-211ENST00000506690 MST1P26927 711 aa15.82■□□□□ 0.12
SQSTM1-211ENST00000506690 MAPK3P27361 379 aaPredicted RBP15.82■□□□□ 0.12
SQSTM1-211ENST00000506690 RPS11P62280 158 aaKnown RBP eCLIP15.82■□□□□ 0.12
SQSTM1-211ENST00000506690 FGL1Q08830 312 aa15.82■□□□□ 0.12
SQSTM1-211ENST00000506690 CSRP2Q16527 193 aa15.82■□□□□ 0.12
SQSTM1-211ENST00000506690 ASTLQ6HA08 431 aaPredicted RBP15.82■□□□□ 0.12
SQSTM1-211ENST00000506690 SSX6Q7RTT6 188 aa15.82■□□□□ 0.12
SQSTM1-211ENST00000506690 TRAPPC5Q8IUR0 188 aa15.82■□□□□ 0.12
SQSTM1-211ENST00000506690 OR56A1Q8NGH5 318 aa15.82■□□□□ 0.12
SQSTM1-211ENST00000506690 OR6K3Q8NGY3 331 aa15.82■□□□□ 0.12
SQSTM1-211ENST00000506690 SMPDL3BQ92485 455 aa15.82■□□□□ 0.12
SQSTM1-211ENST00000506690 VN1R3Q9BXE9 311 aa15.82■□□□□ 0.12
SQSTM1-211ENST00000506690 DPH1Q9BZG8 443 aa15.82■□□□□ 0.12
SQSTM1-211ENST00000506690 SLC25A32Q9H2D1 315 aa15.82■□□□□ 0.12
SQSTM1-211ENST00000506690 IL21Q9HBE4 155 aa15.82■□□□□ 0.12
SQSTM1-211ENST00000506690 KRCC1Q9NPI7 259 aaPredicted RBP15.82■□□□□ 0.12
SQSTM1-211ENST00000506690 ANKRD10Q9NXR5 420 aa15.82■□□□□ 0.12
SQSTM1-211ENST00000506690 SLC7A7Q9UM01 511 aa15.82■□□□□ 0.12
SQSTM1-211ENST00000506690 SLC6A5Q9Y345 797 aa15.82■□□□□ 0.12
SQSTM1-211ENST00000506690 MDC1Q14676 2089 aaKnown RBP15.82■□□□□ 0.12
SQSTM1-211ENST00000506690 PRKRAO75569 313 aaKnown RBP15.82■□□□□ 0.12
SQSTM1-211ENST00000506690 ZIC2O95409 532 aaPredicted RBP15.82■□□□□ 0.12
SQSTM1-211ENST00000506690 FUT1P19526 365 aa15.82■□□□□ 0.12
SQSTM1-211ENST00000506690 SLC2A5P22732 501 aa15.82■□□□□ 0.12
SQSTM1-211ENST00000506690 PTH2RP49190 550 aa15.82■□□□□ 0.12
SQSTM1-211ENST00000506690 SLC16A1P53985 500 aa15.82■□□□□ 0.12
SQSTM1-211ENST00000506690 KRT33BQ14525 404 aa15.82■□□□□ 0.12
SQSTM1-211ENST00000506690 MELKQ14680 651 aa15.82■□□□□ 0.12
SQSTM1-211ENST00000506690 OR4C11Q6IEV9 310 aa15.82■□□□□ 0.12
SQSTM1-211ENST00000506690 HEPHL1Q6MZM0 1159 aa15.82■□□□□ 0.12
SQSTM1-211ENST00000506690 FAAP20Q6NZ36 180 aa15.82■□□□□ 0.12
SQSTM1-211ENST00000506690 DPPA4Q7L190 304 aa15.82■□□□□ 0.12
SQSTM1-211ENST00000506690 LSRQ86X29 649 aaPredicted RBP15.82■□□□□ 0.12
SQSTM1-211ENST00000506690 OR5M1Q8NGP8 315 aa15.82■□□□□ 0.12
SQSTM1-211ENST00000506690 ORAI1Q96D31 301 aa15.82■□□□□ 0.12
SQSTM1-211ENST00000506690 SMIM19Q96E16 107 aa15.82■□□□□ 0.12
SQSTM1-211ENST00000506690 OR51V1Q9H2C8 321 aa15.82■□□□□ 0.12
SQSTM1-211ENST00000506690 NRIP3Q9NQ35 241 aa15.82■□□□□ 0.12
SQSTM1-211ENST00000506690 STARD7Q9NQZ5 370 aa15.82■□□□□ 0.12
SQSTM1-211ENST00000506690 SIDT1Q9NXL6 827 aaKnown RBP15.82■□□□□ 0.12
SQSTM1-211ENST00000506690 MYOFQ9NZM1 2061 aa15.81■□□□□ 0.12
SQSTM1-211ENST00000506690 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.81■□□□□ 0.12
SQSTM1-211ENST00000506690 FXYD6-FXYD2A0A087WZ82 144 aa15.81■□□□□ 0.12
SQSTM1-211ENST00000506690 A0A0G2JN53 185 aa15.81■□□□□ 0.12
SQSTM1-211ENST00000506690 TSPAN11A1L157 253 aa15.81■□□□□ 0.12
SQSTM1-211ENST00000506690 PPM1DO15297 605 aa15.81■□□□□ 0.12
SQSTM1-211ENST00000506690 SIGLEC5O15389 551 aa15.81■□□□□ 0.12
SQSTM1-211ENST00000506690 SULT1B1O43704 296 aa15.81■□□□□ 0.12
SQSTM1-211ENST00000506690 MPGP29372 298 aa15.81■□□□□ 0.12
SQSTM1-211ENST00000506690 GDI2P50395 445 aaKnown RBP15.81■□□□□ 0.12
SQSTM1-211ENST00000506690 S100A12P80511 92 aa15.81■□□□□ 0.12
SQSTM1-211ENST00000506690 REEP5Q00765 189 aa15.81■□□□□ 0.12
SQSTM1-211ENST00000506690 FOXK2Q01167 660 aa15.81■□□□□ 0.12
SQSTM1-211ENST00000506690 DUSP2Q05923 314 aa15.81■□□□□ 0.12
SQSTM1-211ENST00000506690 SIGLEC14Q08ET2 396 aa15.81■□□□□ 0.12
SQSTM1-211ENST00000506690 PUS10Q3MIT2 529 aaKnown RBP15.81■□□□□ 0.12
SQSTM1-211ENST00000506690 HDDC3Q8N4P3 179 aa15.81■□□□□ 0.12
SQSTM1-211ENST00000506690 PXT1Q8NFP0 134 aa15.81■□□□□ 0.12
SQSTM1-211ENST00000506690 OR52B4Q8NGK2 314 aa15.81■□□□□ 0.12
SQSTM1-211ENST00000506690 RAD51AP1Q96B01 352 aa15.81■□□□□ 0.12
SQSTM1-211ENST00000506690 GIMAP5Q96F15 307 aa15.81■□□□□ 0.12
SQSTM1-211ENST00000506690 HS6ST2Q96MM7 605 aa15.81■□□□□ 0.12
SQSTM1-211ENST00000506690 CD180Q99467 661 aa15.81■□□□□ 0.12
SQSTM1-211ENST00000506690 NKX6-2Q9C056 277 aaPredicted RBP15.81■□□□□ 0.12
SQSTM1-211ENST00000506690 FXYD6Q9H0Q3 95 aa15.81■□□□□ 0.12
SQSTM1-211ENST00000506690 DPEP2Q9H4A9 486 aa15.81■□□□□ 0.12
SQSTM1-211ENST00000506690 CALML5Q9NZT1 146 aa15.81■□□□□ 0.12
SQSTM1-211ENST00000506690 ZNF223Q9UK11 482 aaPredicted RBP15.81■□□□□ 0.12
SQSTM1-211ENST00000506690 THSD7BQ9C0I4 1608 aa15.81■□□□□ 0.12
SQSTM1-211ENST00000506690 FAM86C2PA6NEL3 165 aa15.8■□□□□ 0.12
SQSTM1-211ENST00000506690 GLOD5A6NK44 160 aa15.8■□□□□ 0.12
SQSTM1-211ENST00000506690 IGF2P01344 180 aa15.8■□□□□ 0.12
SQSTM1-211ENST00000506690 RLN2P04090 185 aa15.8■□□□□ 0.12
SQSTM1-211ENST00000506690 BMP7P18075 431 aa15.8■□□□□ 0.12
SQSTM1-211ENST00000506690 DPP4P27487 766 aa15.8■□□□□ 0.12
SQSTM1-211ENST00000506690 NOS3P29474 1203 aa15.8■□□□□ 0.12
SQSTM1-211ENST00000506690 ACTC1P68032 377 aa15.8■□□□□ 0.12
SQSTM1-211ENST00000506690 ACTA1P68133 377 aa15.8■□□□□ 0.12
SQSTM1-211ENST00000506690 DEFA5Q01523 94 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms