RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 KDRP35968 1356 aa2.69□□□□□ -1.98
TOPBP1-204ENST00000505804 GTF3C1Q12789 2109 aa2.68□□□□□ -1.98
TOPBP1-204ENST00000505804 A0A1W2PNV4 684 aa2.68□□□□□ -1.98
TOPBP1-204ENST00000505804 NPIPA7E9PJI5 369 aa2.68□□□□□ -1.98
TOPBP1-204ENST00000505804 LRATO95237 230 aa2.68□□□□□ -1.98
TOPBP1-204ENST00000505804 SNAPINO95295 136 aa2.68□□□□□ -1.98
TOPBP1-204ENST00000505804 NPIPA8P0DM63 369 aa2.68□□□□□ -1.98
TOPBP1-204ENST00000505804 HSPA5P11021 654 aaKnown RBP2.68□□□□□ -1.98
TOPBP1-204ENST00000505804 CCNE1P24864 410 aa2.68□□□□□ -1.98
TOPBP1-204ENST00000505804 ACAA2P42765 397 aaKnown RBP2.68□□□□□ -1.98
TOPBP1-204ENST00000505804 KLHL30Q0D2K2 578 aa2.68□□□□□ -1.98
TOPBP1-204ENST00000505804 SNTB2Q13425 540 aaKnown RBP2.68□□□□□ -1.98
TOPBP1-204ENST00000505804 SLC36A3Q495N2 470 aa2.68□□□□□ -1.98
TOPBP1-204ENST00000505804 NADK2Q4G0N4 442 aa2.68□□□□□ -1.98
TOPBP1-204ENST00000505804 Q6ZVH6 145 aa2.68□□□□□ -1.98
TOPBP1-204ENST00000505804 C20orf203Q8NBC4 194 aa2.68□□□□□ -1.98
TOPBP1-204ENST00000505804 OR2T34Q8NGX1 318 aa2.68□□□□□ -1.98
TOPBP1-204ENST00000505804 RAPGEF5Q92565 580 aa2.68□□□□□ -1.98
TOPBP1-204ENST00000505804 TMEM101Q96IK0 257 aa2.68□□□□□ -1.98
TOPBP1-204ENST00000505804 AMDHD1Q96NU7 426 aa2.68□□□□□ -1.98
TOPBP1-204ENST00000505804 EDEM2Q9BV94 578 aa2.68□□□□□ -1.98
TOPBP1-204ENST00000505804 POLR2J2Q9GZM3 115 aaKnown RBP2.68□□□□□ -1.98
TOPBP1-204ENST00000505804 POLR2J3Q9H1A7 115 aaKnown RBP2.68□□□□□ -1.98
TOPBP1-204ENST00000505804 RIBC2Q9H4K1 309 aa2.68□□□□□ -1.98
TOPBP1-204ENST00000505804 SMYD3Q9H7B4 428 aa2.68□□□□□ -1.98
TOPBP1-204ENST00000505804 SLC17A5Q9NRA2 495 aa2.68□□□□□ -1.98
TOPBP1-204ENST00000505804 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.68□□□□□ -1.98
TOPBP1-204ENST00000505804 TBK1Q9UHD2 729 aa2.68□□□□□ -1.98
TOPBP1-204ENST00000505804 BTNL2Q9UIR0 455 aa2.68□□□□□ -1.98
TOPBP1-204ENST00000505804 NPIPA1Q9UND3 350 aa2.68□□□□□ -1.98
TOPBP1-204ENST00000505804 AP1M2Q9Y6Q5 423 aa2.68□□□□□ -1.98
TOPBP1-204ENST00000505804 PLEKHG1Q9ULL1 1385 aa2.68□□□□□ -1.98
TOPBP1-204ENST00000505804 PINLYPA6NC86 204 aa2.67□□□□□ -1.98
TOPBP1-204ENST00000505804 XPO1O14980 1071 aaKnown RBP2.67□□□□□ -1.98
TOPBP1-204ENST00000505804 ADCY5O95622 1261 aa2.67□□□□□ -1.98
TOPBP1-204ENST00000505804 GUCA1CO95843 209 aa2.67□□□□□ -1.98
TOPBP1-204ENST00000505804 RBMY1CP0DJD4 496 aa2.67□□□□□ -1.98
TOPBP1-204ENST00000505804 NR2C1P13056 603 aa2.67□□□□□ -1.98
TOPBP1-204ENST00000505804 MDKP21741 143 aaPredicted RBP2.67□□□□□ -1.98
TOPBP1-204ENST00000505804 FGF9P31371 208 aaPredicted RBP2.67□□□□□ -1.98
TOPBP1-204ENST00000505804 SOX6P35712 828 aa2.67□□□□□ -1.98
TOPBP1-204ENST00000505804 CHI3L1P36222 383 aaPredicted RBP2.67□□□□□ -1.98
TOPBP1-204ENST00000505804 LEPP41159 167 aa2.67□□□□□ -1.98
TOPBP1-204ENST00000505804 RGS4P49798 205 aa2.67□□□□□ -1.98
TOPBP1-204ENST00000505804 HNRNPA3P51991 378 aaKnown RBP2.67□□□□□ -1.98
TOPBP1-204ENST00000505804 NUP107P57740 925 aa2.67□□□□□ -1.98
TOPBP1-204ENST00000505804 ELP6Q0PNE2 266 aa2.67□□□□□ -1.98
TOPBP1-204ENST00000505804 DAZ2Q13117 558 aaKnown RBP2.67□□□□□ -1.98
TOPBP1-204ENST00000505804 TPD52L1Q16890 204 aaPredicted RBP2.67□□□□□ -1.98
TOPBP1-204ENST00000505804 PAGE3Q5JUK9 113 aa2.67□□□□□ -1.98
TOPBP1-204ENST00000505804 CES3Q6UWW8 571 aa2.67□□□□□ -1.98
TOPBP1-204ENST00000505804 CTNNBL1Q8WYA6 563 aaPredicted RBP2.67□□□□□ -1.98
TOPBP1-204ENST00000505804 THRSPQ92748 146 aa2.67□□□□□ -1.98
TOPBP1-204ENST00000505804 RPUSD4Q96CM3 377 aaKnown RBP2.67□□□□□ -1.98
TOPBP1-204ENST00000505804 PELI1Q96FA3 418 aa2.67□□□□□ -1.98
TOPBP1-204ENST00000505804 SH3YL1Q96HL8 342 aaPredicted RBP2.67□□□□□ -1.98
TOPBP1-204ENST00000505804 C7orf34Q96L11 122 aa2.67□□□□□ -1.98
TOPBP1-204ENST00000505804 TBX15Q96SF7 602 aa2.67□□□□□ -1.98
TOPBP1-204ENST00000505804 OMDQ99983 421 aa2.67□□□□□ -1.98
TOPBP1-204ENST00000505804 ZNF670Q9BS34 389 aa2.67□□□□□ -1.98
TOPBP1-204ENST00000505804 SLC35A5Q9BS91 424 aa2.67□□□□□ -1.98
TOPBP1-204ENST00000505804 VCPKMTQ9H867 229 aa2.67□□□□□ -1.98
TOPBP1-204ENST00000505804 APMAPQ9HDC9 416 aa2.67□□□□□ -1.98
TOPBP1-204ENST00000505804 DAZ3Q9NR90 486 aaKnown RBP2.67□□□□□ -1.98
TOPBP1-204ENST00000505804 AATFQ9NY61 560 aaKnown RBP eCLIP2.67□□□□□ -1.98
TOPBP1-204ENST00000505804 TREM2Q9NZC2 230 aa2.67□□□□□ -1.98
TOPBP1-204ENST00000505804 PHF11Q9UIL8 331 aa2.67□□□□□ -1.98
TOPBP1-204ENST00000505804 CDH10Q9Y6N8 788 aa2.67□□□□□ -1.98
TOPBP1-204ENST00000505804 A0A1B0GUS0 222 aa2.66□□□□□ -1.98
TOPBP1-204ENST00000505804 PSMB11A5LHX3 300 aa2.66□□□□□ -1.98
TOPBP1-204ENST00000505804 A8MUA0 341 aa2.66□□□□□ -1.98
TOPBP1-204ENST00000505804 TRIM49D1C9J1S8 452 aa2.66□□□□□ -1.98
TOPBP1-204ENST00000505804 OR10H3O60404 316 aa2.66□□□□□ -1.98
TOPBP1-204ENST00000505804 NOL3O60936 208 aaKnown RBP2.66□□□□□ -1.98
TOPBP1-204ENST00000505804 ZNF780AO75290 641 aaPredicted RBP2.66□□□□□ -1.98
TOPBP1-204ENST00000505804 ZNF17P17021 662 aa2.66□□□□□ -1.98
TOPBP1-204ENST00000505804 DESP17661 470 aa2.66□□□□□ -1.98
TOPBP1-204ENST00000505804 COX7A1P24310 79 aa2.66□□□□□ -1.98
TOPBP1-204ENST00000505804 ANXA13P27216 316 aa2.66□□□□□ -1.98
TOPBP1-204ENST00000505804 HTR1EP28566 365 aa2.66□□□□□ -1.98
TOPBP1-204ENST00000505804 P2RY1P47900 373 aa2.66□□□□□ -1.98
TOPBP1-204ENST00000505804 DAP3P51398 398 aaKnown RBP2.66□□□□□ -1.98
TOPBP1-204ENST00000505804 HSD17B7P56937 341 aa2.66□□□□□ -1.98
TOPBP1-204ENST00000505804 ARL6IP1Q15041 203 aa2.66□□□□□ -1.98
TOPBP1-204ENST00000505804 PDK4Q16654 411 aa2.66□□□□□ -1.98
TOPBP1-204ENST00000505804 NSUN5P1Q3KNT7 163 aa2.66□□□□□ -1.98
TOPBP1-204ENST00000505804 SLC25A52Q3SY17 297 aa2.66□□□□□ -1.98
TOPBP1-204ENST00000505804 DNAJC21Q5F1R6 531 aaKnown RBP2.66□□□□□ -1.98
TOPBP1-204ENST00000505804 TPGS2Q68CL5 300 aa2.66□□□□□ -1.98
TOPBP1-204ENST00000505804 MOB3BQ86TA1 216 aa2.66□□□□□ -1.98
TOPBP1-204ENST00000505804 MKXQ8IYA7 352 aa2.66□□□□□ -1.98
TOPBP1-204ENST00000505804 RNF175Q8N4F7 328 aa2.66□□□□□ -1.98
TOPBP1-204ENST00000505804 DHRSXQ8N5I4 330 aa2.66□□□□□ -1.98
TOPBP1-204ENST00000505804 LINC01555Q8NAE3 123 aa2.66□□□□□ -1.98
TOPBP1-204ENST00000505804 CATSPER1Q8NEC5 780 aa2.66□□□□□ -1.98
TOPBP1-204ENST00000505804 OR4D9Q8NGE8 314 aa2.66□□□□□ -1.98
TOPBP1-204ENST00000505804 FBXO30Q8TB52 745 aa2.66□□□□□ -1.98
TOPBP1-204ENST00000505804 DNAJA4Q8WW22 397 aaPredicted RBP2.66□□□□□ -1.98
TOPBP1-204ENST00000505804 CHCHD10Q8WYQ3 142 aaPredicted RBP2.66□□□□□ -1.98
TOPBP1-204ENST00000505804 ST8SIA1Q92185 356 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms