RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 EPCAMP16422 314 aa10.98□□□□□ -0.65
UBE3D-206ENST00000505226 ID2Q02363 134 aa10.98□□□□□ -0.65
UBE3D-206ENST00000505226 VN1R4Q7Z5H5 301 aa10.98□□□□□ -0.65
UBE3D-206ENST00000505226 GPALPP1Q8IXQ4 340 aa10.98□□□□□ -0.65
UBE3D-206ENST00000505226 TEX19Q8NA77 164 aa10.98□□□□□ -0.65
UBE3D-206ENST00000505226 OR2T4Q8NH00 348 aa10.98□□□□□ -0.65
UBE3D-206ENST00000505226 LGALS14Q8TCE9 139 aa10.98□□□□□ -0.65
UBE3D-206ENST00000505226 WFIKKN2Q8TEU8 576 aa10.98□□□□□ -0.65
UBE3D-206ENST00000505226 HMGB4Q8WW32 186 aa10.98□□□□□ -0.65
UBE3D-206ENST00000505226 PELI1Q96FA3 418 aa10.98□□□□□ -0.65
UBE3D-206ENST00000505226 MS4A4EQ96PG1 132 aa10.98□□□□□ -0.65
UBE3D-206ENST00000505226 OR14A2Q96R54 314 aa10.98□□□□□ -0.65
UBE3D-206ENST00000505226 PDCD1LG2Q9BQ51 273 aa10.98□□□□□ -0.65
UBE3D-206ENST00000505226 WSB2Q9NYS7 404 aaPredicted RBP10.98□□□□□ -0.65
UBE3D-206ENST00000505226 ZNF224Q9NZL3 707 aa10.98□□□□□ -0.65
UBE3D-206ENST00000505226 NTMQ9P121 344 aa10.98□□□□□ -0.65
UBE3D-206ENST00000505226 SERGEFQ9UGK8 458 aa10.98□□□□□ -0.65
UBE3D-206ENST00000505226 SCP2D1Q9UJQ7 156 aa10.98□□□□□ -0.65
UBE3D-206ENST00000505226 PCDHGA9Q9Y5G4 932 aaKnown RBP10.98□□□□□ -0.65
UBE3D-206ENST00000505226 DENND4AQ7Z401 1863 aa10.98□□□□□ -0.65
UBE3D-206ENST00000505226 PTPRSQ13332 1948 aa10.98□□□□□ -0.65
UBE3D-206ENST00000505226 ABHD14A-ACY1A0A1B0GW23 586 aa10.98□□□□□ -0.65
UBE3D-206ENST00000505226 LRRN3E7EW58 273 aa10.98□□□□□ -0.65
UBE3D-206ENST00000505226 ZNF888P0CJ79 500 aaPredicted RBP10.98□□□□□ -0.65
UBE3D-206ENST00000505226 PTHLHP12272 177 aa10.98□□□□□ -0.65
UBE3D-206ENST00000505226 NT5EP21589 574 aa10.98□□□□□ -0.65
UBE3D-206ENST00000505226 TCEA2Q15560 299 aa10.98□□□□□ -0.65
UBE3D-206ENST00000505226 NRROSQ86YC3 692 aa10.98□□□□□ -0.65
UBE3D-206ENST00000505226 OR2L13Q8N349 312 aa10.98□□□□□ -0.65
UBE3D-206ENST00000505226 FTMTQ8N4E7 242 aa10.98□□□□□ -0.65
UBE3D-206ENST00000505226 SLAIN1Q8ND83 568 aa10.98□□□□□ -0.65
UBE3D-206ENST00000505226 OR56B4Q8NH76 319 aa10.98□□□□□ -0.65
UBE3D-206ENST00000505226 TNFRSF13CQ96RJ3 184 aa10.98□□□□□ -0.65
UBE3D-206ENST00000505226 DDOQ99489 341 aa10.98□□□□□ -0.65
UBE3D-206ENST00000505226 TEX101Q9BY14 249 aa10.98□□□□□ -0.65
UBE3D-206ENST00000505226 LRRN3Q9H3W5 708 aa10.98□□□□□ -0.65
UBE3D-206ENST00000505226 IL21RQ9HBE5 538 aa10.98□□□□□ -0.65
UBE3D-206ENST00000505226 INPP5EQ9NRR6 644 aa10.98□□□□□ -0.65
UBE3D-206ENST00000505226 PTTG3PQ9NZH4 202 aa10.98□□□□□ -0.65
UBE3D-206ENST00000505226 UBQLN2Q9UHD9 624 aa10.98□□□□□ -0.65
UBE3D-206ENST00000505226 ACSL5Q9ULC5 683 aa10.98□□□□□ -0.65
UBE3D-206ENST00000505226 CAMK2AQ9UQM7 478 aa10.98□□□□□ -0.65
UBE3D-206ENST00000505226 TRAV1-2A0A0B4J238 106 aa10.97□□□□□ -0.65
UBE3D-206ENST00000505226 A0A1B0GVI7 797 aa10.97□□□□□ -0.65
UBE3D-206ENST00000505226 IMPA2O14732 288 aa10.97□□□□□ -0.65
UBE3D-206ENST00000505226 PAK4O96013 591 aaPredicted RBP10.97□□□□□ -0.65
UBE3D-206ENST00000505226 NGFRP08138 427 aa10.97□□□□□ -0.65
UBE3D-206ENST00000505226 SAGP10523 405 aaPredicted RBP10.97□□□□□ -0.65
UBE3D-206ENST00000505226 VEGFCP49767 419 aa10.97□□□□□ -0.65
UBE3D-206ENST00000505226 ZAR1Q86SH2 424 aa10.97□□□□□ -0.65
UBE3D-206ENST00000505226 TOR1AIP2Q8NFQ8 470 aa10.97□□□□□ -0.65
UBE3D-206ENST00000505226 SMIM4Q8WVI0 70 aa10.97□□□□□ -0.65
UBE3D-206ENST00000505226 ZMYND19Q96E35 227 aaPredicted RBP10.97□□□□□ -0.65
UBE3D-206ENST00000505226 CHIAQ9BZP6 476 aa10.97□□□□□ -0.65
UBE3D-206ENST00000505226 OR10A4Q9H209 315 aa10.97□□□□□ -0.65
UBE3D-206ENST00000505226 PRSS16Q9NQE7 514 aa10.97□□□□□ -0.65
UBE3D-206ENST00000505226 CA10Q9NS85 328 aa10.97□□□□□ -0.65
UBE3D-206ENST00000505226 COPZ2Q9P299 210 aa10.97□□□□□ -0.65
UBE3D-206ENST00000505226 RCE1Q9Y256 329 aa10.97□□□□□ -0.65
UBE3D-206ENST00000505226 SLC35A3Q9Y2D2 325 aa10.97□□□□□ -0.65
UBE3D-206ENST00000505226 FAM86C2PA6NEL3 165 aa10.97□□□□□ -0.65
UBE3D-206ENST00000505226 DUXAA6NLW8 204 aa10.97□□□□□ -0.65
UBE3D-206ENST00000505226 TRIM77I1YAP6 450 aa10.97□□□□□ -0.65
UBE3D-206ENST00000505226 GSTZ1O43708 216 aaPredicted RBP10.97□□□□□ -0.65
UBE3D-206ENST00000505226 IFNA7P01567 189 aa10.97□□□□□ -0.65
UBE3D-206ENST00000505226 PEPDP12955 493 aa10.97□□□□□ -0.65
UBE3D-206ENST00000505226 BLVRAP53004 296 aa10.97□□□□□ -0.65
UBE3D-206ENST00000505226 RAG2P55895 527 aa10.97□□□□□ -0.65
UBE3D-206ENST00000505226 TRAM1Q15629 374 aa10.97□□□□□ -0.65
UBE3D-206ENST00000505226 FAAP20Q6NZ36 180 aa10.97□□□□□ -0.65
UBE3D-206ENST00000505226 TMPRSS11FQ6ZWK6 438 aa10.97□□□□□ -0.65
UBE3D-206ENST00000505226 FGD2Q7Z6J4 655 aa10.97□□□□□ -0.65
UBE3D-206ENST00000505226 SERPINA12Q8IW75 414 aa10.97□□□□□ -0.65
UBE3D-206ENST00000505226 TMEFF1Q8IYR6 380 aa10.97□□□□□ -0.65
UBE3D-206ENST00000505226 LRRC25Q8N386 305 aaPredicted RBP10.97□□□□□ -0.65
UBE3D-206ENST00000505226 MRPL43Q8N983 215 aaKnown RBP10.97□□□□□ -0.65
UBE3D-206ENST00000505226 SARGQ9BW04 601 aa10.97□□□□□ -0.65
UBE3D-206ENST00000505226 CXXC1Q9P0U4 656 aaPredicted RBP10.97□□□□□ -0.65
UBE3D-206ENST00000505226 PIPOXQ9P0Z9 390 aa10.97□□□□□ -0.65
UBE3D-206ENST00000505226 RPS6KB2Q9UBS0 482 aa10.97□□□□□ -0.65
UBE3D-206ENST00000505226 KLK11Q9UBX7 282 aa10.97□□□□□ -0.65
UBE3D-206ENST00000505226 TBC1D3KA0A087X1G2 549 aa10.97□□□□□ -0.65
UBE3D-206ENST00000505226 TBC1D3BA6NDS4 549 aa10.97□□□□□ -0.65
UBE3D-206ENST00000505226 TBC1D3FA6NER0 549 aaPredicted RBP10.97□□□□□ -0.65
UBE3D-206ENST00000505226 MID1O15344 667 aa10.97□□□□□ -0.65
UBE3D-206ENST00000505226 PIN1P1O15428 100 aa10.97□□□□□ -0.65
UBE3D-206ENST00000505226 RGS11O94810 467 aa10.97□□□□□ -0.65
UBE3D-206ENST00000505226 PCDH8O95206 1070 aa10.97□□□□□ -0.65
UBE3D-206ENST00000505226 CXCL2P19875 107 aa10.97□□□□□ -0.65
UBE3D-206ENST00000505226 RPS4Y1P22090 263 aaKnown RBP10.97□□□□□ -0.65
UBE3D-206ENST00000505226 MNX1P50219 401 aaPredicted RBP10.97□□□□□ -0.65
UBE3D-206ENST00000505226 GDI2P50395 445 aaKnown RBP10.97□□□□□ -0.65
UBE3D-206ENST00000505226 CCR9P51686 369 aa10.97□□□□□ -0.65
UBE3D-206ENST00000505226 RPS15P62841 145 aaKnown RBP10.97□□□□□ -0.65
UBE3D-206ENST00000505226 SUZ12Q15022 739 aaKnown RBP10.97□□□□□ -0.65
UBE3D-206ENST00000505226 IRF4Q15306 451 aa10.97□□□□□ -0.65
UBE3D-206ENST00000505226 TBC1D3GQ6DHY5 549 aa10.97□□□□□ -0.65
UBE3D-206ENST00000505226 ZNF425Q6IV72 752 aa10.97□□□□□ -0.65
UBE3D-206ENST00000505226 FAM199XQ6PEV8 388 aaPredicted RBP10.97□□□□□ -0.65
UBE3D-206ENST00000505226 CHMP1BQ7LBR1 199 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms