RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 NCK1P16333 377 aa7.45□□□□□ -1.22
CDC42SE2-208ENST00000505065 AGAP20933 346 aa7.45□□□□□ -1.22
CDC42SE2-208ENST00000505065 SLC7A1P30825 629 aa7.45□□□□□ -1.22
CDC42SE2-208ENST00000505065 SUCLG1P53597 346 aaKnown RBP7.45□□□□□ -1.22
CDC42SE2-208ENST00000505065 SESN3P58005 492 aa7.45□□□□□ -1.22
CDC42SE2-208ENST00000505065 KCNJ2P63252 427 aa7.45□□□□□ -1.22
CDC42SE2-208ENST00000505065 STK11Q15831 433 aa7.45□□□□□ -1.22
CDC42SE2-208ENST00000505065 ENTPD8Q5MY95 495 aa7.45□□□□□ -1.22
CDC42SE2-208ENST00000505065 ULK3Q6PHR2 472 aa7.45□□□□□ -1.22
CDC42SE2-208ENST00000505065 CARM1Q86X55 608 aa7.45□□□□□ -1.22
CDC42SE2-208ENST00000505065 RNF113BQ8IZP6 322 aaKnown RBP7.45□□□□□ -1.22
CDC42SE2-208ENST00000505065 MPP4Q96JB8 637 aa7.45□□□□□ -1.22
CDC42SE2-208ENST00000505065 GPX7Q96SL4 187 aaPredicted RBP7.45□□□□□ -1.22
CDC42SE2-208ENST00000505065 ARMC7Q9H6L4 198 aa7.45□□□□□ -1.22
CDC42SE2-208ENST00000505065 AGPAT4Q9NRZ5 378 aa7.45□□□□□ -1.22
CDC42SE2-208ENST00000505065 B4GALT7Q9UBV7 327 aa7.45□□□□□ -1.22
CDC42SE2-208ENST00000505065 ZNF232Q9UNY5 417 aa7.45□□□□□ -1.22
CDC42SE2-208ENST00000505065 IMPDH2P12268 514 aa7.45□□□□□ -1.22
CDC42SE2-208ENST00000505065 IL7RP16871 459 aa7.45□□□□□ -1.22
CDC42SE2-208ENST00000505065 UQCRC1P31930 480 aa7.45□□□□□ -1.22
CDC42SE2-208ENST00000505065 HPCAP84074 193 aa7.45□□□□□ -1.22
CDC42SE2-208ENST00000505065 GALNT10Q86SR1 603 aa7.45□□□□□ -1.22
CDC42SE2-208ENST00000505065 DHFR2Q86XF0 187 aa7.45□□□□□ -1.22
CDC42SE2-208ENST00000505065 GHDCQ8N2G8 530 aa7.45□□□□□ -1.22
CDC42SE2-208ENST00000505065 NRBF2Q96F24 287 aa7.45□□□□□ -1.22
CDC42SE2-208ENST00000505065 SEC14L3Q9UDX4 400 aa7.45□□□□□ -1.22
CDC42SE2-208ENST00000505065 HDGFL3Q9Y3E1 203 aa7.45□□□□□ -1.22
CDC42SE2-208ENST00000505065 MED12LQ86YW9 2145 aa7.45□□□□□ -1.22
CDC42SE2-208ENST00000505065 A0A1B0GWA3 101 aa7.45□□□□□ -1.22
CDC42SE2-208ENST00000505065 FRS3O43559 492 aa7.45□□□□□ -1.22
CDC42SE2-208ENST00000505065 RAP2AP10114 183 aa7.45□□□□□ -1.22
CDC42SE2-208ENST00000505065 ZNF24P17028 368 aa7.45□□□□□ -1.22
CDC42SE2-208ENST00000505065 DPP4P27487 766 aa7.45□□□□□ -1.22
CDC42SE2-208ENST00000505065 SHC1P29353 583 aa7.45□□□□□ -1.22
CDC42SE2-208ENST00000505065 TIMP3P35625 211 aa7.45□□□□□ -1.22
CDC42SE2-208ENST00000505065 SLC10A1Q14973 349 aa7.45□□□□□ -1.22
CDC42SE2-208ENST00000505065 NSUN5P2Q63ZY6 315 aa7.45□□□□□ -1.22
CDC42SE2-208ENST00000505065 VTCN1Q7Z7D3 282 aa7.45□□□□□ -1.22
CDC42SE2-208ENST00000505065 JADE3Q92613 823 aa7.45□□□□□ -1.22
CDC42SE2-208ENST00000505065 MEPEQ9NQ76 525 aaPredicted RBP7.45□□□□□ -1.22
CDC42SE2-208ENST00000505065 ADPRHL2Q9NX46 363 aa7.45□□□□□ -1.22
CDC42SE2-208ENST00000505065 TAS2R10Q9NYW0 307 aa7.45□□□□□ -1.22
CDC42SE2-208ENST00000505065 TENM4Q6N022 2769 aa7.44□□□□□ -1.22
CDC42SE2-208ENST00000505065 TRAPPC13A5PLN9 417 aa7.44□□□□□ -1.22
CDC42SE2-208ENST00000505065 TMEM247A6NEH6 219 aa7.44□□□□□ -1.22
CDC42SE2-208ENST00000505065 AHRRA9YTQ3 701 aa7.44□□□□□ -1.22
CDC42SE2-208ENST00000505065 ACOT7O00154 380 aa7.44□□□□□ -1.22
CDC42SE2-208ENST00000505065 CGAP01215 116 aa7.44□□□□□ -1.22
CDC42SE2-208ENST00000505065 PEPDP12955 493 aa7.44□□□□□ -1.22
CDC42SE2-208ENST00000505065 HK1P19367 917 aa7.44□□□□□ -1.22
CDC42SE2-208ENST00000505065 CA7P43166 264 aa7.44□□□□□ -1.22
CDC42SE2-208ENST00000505065 CDH12P55289 794 aa7.44□□□□□ -1.22
CDC42SE2-208ENST00000505065 LTBQ06643 244 aa7.44□□□□□ -1.22
CDC42SE2-208ENST00000505065 SRSF1Q07955 248 aaKnown RBP eCLIP7.44□□□□□ -1.22
CDC42SE2-208ENST00000505065 HMBOX1Q6NT76 420 aa7.44□□□□□ -1.22
CDC42SE2-208ENST00000505065 TMPRSS11FQ6ZWK6 438 aa7.44□□□□□ -1.22
CDC42SE2-208ENST00000505065 TMEM234Q8WY98 164 aa7.44□□□□□ -1.22
CDC42SE2-208ENST00000505065 ZNF347Q96SE7 839 aa7.44□□□□□ -1.22
CDC42SE2-208ENST00000505065 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.44□□□□□ -1.227e-7■■■■□ 20.8
CDC42SE2-208ENST00000505065 BCO1Q9HAY6 547 aa7.44□□□□□ -1.22
CDC42SE2-208ENST00000505065 ASF1BQ9NVP2 202 aa7.44□□□□□ -1.22
CDC42SE2-208ENST00000505065 VNN3Q9NY84 501 aa7.44□□□□□ -1.22
CDC42SE2-208ENST00000505065 ZNF337Q9Y3M9 751 aa7.44□□□□□ -1.22
CDC42SE2-208ENST00000505065 SCO2O43819 266 aa7.44□□□□□ -1.22
CDC42SE2-208ENST00000505065 OMPP47874 163 aa7.44□□□□□ -1.22
CDC42SE2-208ENST00000505065 ALDH6A1Q02252 535 aaKnown RBP7.44□□□□□ -1.22
CDC42SE2-208ENST00000505065 ANKDD1AQ495B1 522 aa7.44□□□□□ -1.22
CDC42SE2-208ENST00000505065 C3orf33Q6P1S2 294 aa7.44□□□□□ -1.22
CDC42SE2-208ENST00000505065 SLC43A2Q8N370 569 aa7.44□□□□□ -1.22
CDC42SE2-208ENST00000505065 MFSD8Q8NHS3 518 aa7.44□□□□□ -1.22
CDC42SE2-208ENST00000505065 PHOSPHO1Q8TCT1 267 aa7.44□□□□□ -1.22
CDC42SE2-208ENST00000505065 RNF128Q8TEB7 428 aa7.44□□□□□ -1.22
CDC42SE2-208ENST00000505065 TMEM45BQ96B21 275 aa7.44□□□□□ -1.22
CDC42SE2-208ENST00000505065 PIP5K1AQ99755 562 aa7.44□□□□□ -1.22
CDC42SE2-208ENST00000505065 THTPAQ9BU02 230 aa7.44□□□□□ -1.22
CDC42SE2-208ENST00000505065 PAQR5Q9NXK6 330 aaPredicted RBP7.44□□□□□ -1.22
CDC42SE2-208ENST00000505065 TRGV5A0A0B4J1U4 118 aa7.44□□□□□ -1.22
CDC42SE2-208ENST00000505065 LIPT2A6NK58 231 aa7.44□□□□□ -1.22
CDC42SE2-208ENST00000505065 C5orf58C9J3I9 102 aa7.44□□□□□ -1.22
CDC42SE2-208ENST00000505065 M0R3H8 397 aa7.44□□□□□ -1.22
CDC42SE2-208ENST00000505065 CYTIPO60759 359 aa7.44□□□□□ -1.22
CDC42SE2-208ENST00000505065 WDR1O75083 606 aa7.44□□□□□ -1.22
CDC42SE2-208ENST00000505065 SS18L1O75177 396 aaPredicted RBP7.44□□□□□ -1.22
CDC42SE2-208ENST00000505065 PTP4A3O75365 173 aa7.44□□□□□ -1.22
CDC42SE2-208ENST00000505065 PDE5AO76074 875 aa7.44□□□□□ -1.22
CDC42SE2-208ENST00000505065 PRKD3O94806 890 aa7.44□□□□□ -1.22
CDC42SE2-208ENST00000505065 ATP6AP1Q15904 470 aa7.44□□□□□ -1.22
CDC42SE2-208ENST00000505065 ZSCAN26Q16670 478 aa7.44□□□□□ -1.22
CDC42SE2-208ENST00000505065 ACSF3Q4G176 576 aaPredicted RBP7.44□□□□□ -1.22
CDC42SE2-208ENST00000505065 ESPNLQ6ZVH7 1005 aa7.44□□□□□ -1.22
CDC42SE2-208ENST00000505065 CLDN22Q8N7P3 220 aa7.44□□□□□ -1.22
CDC42SE2-208ENST00000505065 SCAIQ8N9R8 606 aa7.44□□□□□ -1.22
CDC42SE2-208ENST00000505065 DGCR6LQ9BY27 220 aa7.44□□□□□ -1.22
CDC42SE2-208ENST00000505065 PTGES2Q9H7Z7 377 aa7.44□□□□□ -1.22
CDC42SE2-208ENST00000505065 ZNF71Q9NQZ8 489 aaPredicted RBP7.44□□□□□ -1.22
CDC42SE2-208ENST00000505065 CTPS2Q9NRF8 586 aa7.44□□□□□ -1.22
CDC42SE2-208ENST00000505065 ADA2Q9NZK5 511 aa7.44□□□□□ -1.22
CDC42SE2-208ENST00000505065 CHRNA9Q9UGM1 479 aa7.44□□□□□ -1.22
CDC42SE2-208ENST00000505065 EGFL7Q9UHF1 273 aa7.44□□□□□ -1.22
CDC42SE2-208ENST00000505065 ZNF716A6NP11 495 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms