RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 GDI2P50395 445 aaKnown RBP13.05□□□□□ -0.32
TCOF1-207ENST00000504761 DCAF7P61962 342 aa13.05□□□□□ -0.32
TCOF1-207ENST00000504761 POU3F1Q03052 451 aaPredicted RBP13.05□□□□□ -0.32
TCOF1-207ENST00000504761 UEVLDQ8IX04 471 aa13.05□□□□□ -0.32
TCOF1-207ENST00000504761 OR4N2Q8NGD1 307 aa13.05□□□□□ -0.32
TCOF1-207ENST00000504761 ASB12Q8WXK4 309 aa13.05□□□□□ -0.32
TCOF1-207ENST00000504761 MMACHCQ9Y4U1 282 aa13.05□□□□□ -0.32
TCOF1-207ENST00000504761 CCL27Q9Y4X3 112 aa13.05□□□□□ -0.32
TCOF1-207ENST00000504761 LOC100509620A0A075B734 347 aa13.04□□□□□ -0.32
TCOF1-207ENST00000504761 KCNK2O95069 426 aa13.04□□□□□ -0.32
TCOF1-207ENST00000504761 SYNGR4O95473 234 aa13.04□□□□□ -0.32
TCOF1-207ENST00000504761 CHRNB1P11230 501 aa13.04□□□□□ -0.32
TCOF1-207ENST00000504761 TMEM176BQ3YBM2 270 aaPredicted RBP13.04□□□□□ -0.32
TCOF1-207ENST00000504761 SLC6A19Q695T7 634 aa13.04□□□□□ -0.32
TCOF1-207ENST00000504761 SLC15A4Q8N697 577 aa13.04□□□□□ -0.32
TCOF1-207ENST00000504761 LSM14AQ8ND56 463 aaKnown RBP13.04□□□□□ -0.32
TCOF1-207ENST00000504761 BLACEA4D250 179 aa13.04□□□□□ -0.32
TCOF1-207ENST00000504761 SOCS6O14544 535 aa13.04□□□□□ -0.32
TCOF1-207ENST00000504761 SLC16A6O15403 523 aa13.04□□□□□ -0.32
TCOF1-207ENST00000504761 SLITRK5O94991 958 aa13.04□□□□□ -0.32
TCOF1-207ENST00000504761 PLATP00750 562 aa13.04□□□□□ -0.32
TCOF1-207ENST00000504761 ZNF28P17035 718 aa13.04□□□□□ -0.32
TCOF1-207ENST00000504761 ISL1P61371 349 aa13.04□□□□□ -0.32
TCOF1-207ENST00000504761 SLC35F3Q8IY50 421 aa13.04□□□□□ -0.32
TCOF1-207ENST00000504761 TOMM5Q8N4H5 51 aa13.04□□□□□ -0.32
TCOF1-207ENST00000504761 TNFAIP8L1Q8WVP5 186 aa13.04□□□□□ -0.32
TCOF1-207ENST00000504761 OR5M11Q96RB7 305 aa13.04□□□□□ -0.32
TCOF1-207ENST00000504761 NMNAT3Q96T66 252 aa13.04□□□□□ -0.32
TCOF1-207ENST00000504761 MED11Q9P086 117 aa13.04□□□□□ -0.32
TCOF1-207ENST00000504761 CACNA1GO43497 2377 aa13.04□□□□□ -0.32
TCOF1-207ENST00000504761 PRKYO43930 277 aa13.04□□□□□ -0.32
TCOF1-207ENST00000504761 ECDO95905 644 aaPredicted RBP13.04□□□□□ -0.32
TCOF1-207ENST00000504761 HSF2Q03933 536 aa13.04□□□□□ -0.32
TCOF1-207ENST00000504761 ELAVL1Q15717 326 aaKnown RBP13.04□□□□□ -0.32
TCOF1-207ENST00000504761 GUSBP11Q6P575 273 aa13.04□□□□□ -0.32
TCOF1-207ENST00000504761 SLC2A12Q8TD20 617 aa13.04□□□□□ -0.32
TCOF1-207ENST00000504761 NTN4Q9HB63 628 aa13.04□□□□□ -0.32
TCOF1-207ENST00000504761 SMURF1Q9HCE7 757 aa13.04□□□□□ -0.32
TCOF1-207ENST00000504761 ENAMQ9NRM1 1142 aa13.04□□□□□ -0.32
TCOF1-207ENST00000504761 ZNF337Q9Y3M9 751 aa13.04□□□□□ -0.32
TCOF1-207ENST00000504761 ANK1P16157 1881 aa13.04□□□□□ -0.32
TCOF1-207ENST00000504761 CACNA1HO95180 2353 aa13.04□□□□□ -0.32
TCOF1-207ENST00000504761 TAF4O00268 1085 aa13.03□□□□□ -0.32
TCOF1-207ENST00000504761 OPRL1P41146 370 aa13.03□□□□□ -0.32
TCOF1-207ENST00000504761 POU4F2Q12837 409 aa13.03□□□□□ -0.32
TCOF1-207ENST00000504761 ZNF554Q86TJ5 538 aa13.03□□□□□ -0.32
TCOF1-207ENST00000504761 RHOXF1Q8NHV9 184 aa13.03□□□□□ -0.32
TCOF1-207ENST00000504761 B3GAT2Q9NPZ5 323 aa13.03□□□□□ -0.32
TCOF1-207ENST00000504761 INIPQ9NRY2 104 aa13.03□□□□□ -0.32
TCOF1-207ENST00000504761 ETAA1Q9NY74 926 aa13.03□□□□□ -0.32
TCOF1-207ENST00000504761 KLHL21Q9UJP4 597 aa13.03□□□□□ -0.32
TCOF1-207ENST00000504761 PCDHGA6Q9Y5G7 932 aa13.03□□□□□ -0.32
TCOF1-207ENST00000504761 A0A1B0GVC2 190 aa13.03□□□□□ -0.32
TCOF1-207ENST00000504761 A6NIN4 97 aa13.03□□□□□ -0.32
TCOF1-207ENST00000504761 FUCA1P04066 466 aa13.03□□□□□ -0.32
TCOF1-207ENST00000504761 MAGEA8P43361 318 aa13.03□□□□□ -0.32
TCOF1-207ENST00000504761 RIDAP52758 137 aaKnown RBP13.03□□□□□ -0.32
TCOF1-207ENST00000504761 ACTA2P62736 377 aa13.03□□□□□ -0.32
TCOF1-207ENST00000504761 ACTG2P63267 376 aa13.03□□□□□ -0.32
TCOF1-207ENST00000504761 RAB40BQ12829 278 aa13.03□□□□□ -0.32
TCOF1-207ENST00000504761 SPCS2Q15005 226 aa13.03□□□□□ -0.32
TCOF1-207ENST00000504761 CTU2Q2VPK5 515 aaKnown RBP13.03□□□□□ -0.32
TCOF1-207ENST00000504761 SLC35F2Q8IXU6 374 aa13.03□□□□□ -0.32
TCOF1-207ENST00000504761 C10orf111Q8N326 155 aa13.03□□□□□ -0.32
TCOF1-207ENST00000504761 CEP76Q8TAP6 659 aa13.03□□□□□ -0.32
TCOF1-207ENST00000504761 C4orf36Q96KX1 117 aa13.03□□□□□ -0.32
TCOF1-207ENST00000504761 CLEC4MQ9H2X3 399 aaPredicted RBP13.03□□□□□ -0.32
TCOF1-207ENST00000504761 ENPP5Q9UJA9 477 aa13.03□□□□□ -0.32
TCOF1-207ENST00000504761 PCDHGA10Q9Y5H3 936 aa13.03□□□□□ -0.32
TCOF1-207ENST00000504761 KDM4EB2RXH2 506 aaPredicted RBP13.03□□□□□ -0.32
TCOF1-207ENST00000504761 FARS2O95363 451 aaKnown RBP13.03□□□□□ -0.32
TCOF1-207ENST00000504761 ACP2P11117 423 aa13.03□□□□□ -0.32
TCOF1-207ENST00000504761 LINC00696Q6ZRV3 163 aa13.03□□□□□ -0.32
TCOF1-207ENST00000504761 CENPSQ8N2Z9 138 aa13.03□□□□□ -0.32
TCOF1-207ENST00000504761 NXF5Q9H1B4 397 aaKnown RBP13.03□□□□□ -0.32
TCOF1-207ENST00000504761 UBQLN3Q9H347 655 aa13.03□□□□□ -0.32
TCOF1-207ENST00000504761 FN3KQ9H479 309 aa13.03□□□□□ -0.32
TCOF1-207ENST00000504761 IFT46Q9NQC8 304 aa13.03□□□□□ -0.32
TCOF1-207ENST00000504761 UPB1Q9UBR1 384 aa13.03□□□□□ -0.32
TCOF1-207ENST00000504761 DNAJC13O75165 2243 aa13.03□□□□□ -0.32
TCOF1-207ENST00000504761 LRRN3E7EW58 273 aa13.03□□□□□ -0.32
TCOF1-207ENST00000504761 MAPK3P27361 379 aaPredicted RBP13.03□□□□□ -0.32
TCOF1-207ENST00000504761 MAN2A2P49641 1150 aa13.03□□□□□ -0.32
TCOF1-207ENST00000504761 RASSF6Q6ZTQ3 369 aa13.03□□□□□ -0.32
TCOF1-207ENST00000504761 CALHM3Q86XJ0 350 aa13.03□□□□□ -0.32
TCOF1-207ENST00000504761 TMEM41AQ96HV5 264 aa13.03□□□□□ -0.32
TCOF1-207ENST00000504761 LRRN3Q9H3W5 708 aa13.03□□□□□ -0.32
TCOF1-207ENST00000504761 CLEC2DQ9UHP7 191 aa13.03□□□□□ -0.32
TCOF1-207ENST00000504761 CKAP5Q14008 2032 aa13.03□□□□□ -0.32
TCOF1-207ENST00000504761 OPN5Q6U736 354 aa13.02□□□□□ -0.32
TCOF1-207ENST00000504761 ABI3BPQ7Z7G0 1075 aa13.02□□□□□ -0.32
TCOF1-207ENST00000504761 CLEC1AQ8NC01 280 aa13.02□□□□□ -0.32
TCOF1-207ENST00000504761 CADM4Q8NFZ8 388 aa13.02□□□□□ -0.32
TCOF1-207ENST00000504761 MBOAT4Q96T53 435 aa13.02□□□□□ -0.32
TCOF1-207ENST00000504761 MED28Q9H204 178 aa13.02□□□□□ -0.32
TCOF1-207ENST00000504761 MYEF2Q9P2K5 600 aaKnown RBP13.02□□□□□ -0.32
TCOF1-207ENST00000504761 PSORS1C1Q9UIG5 152 aa13.02□□□□□ -0.32
TCOF1-207ENST00000504761 AP3S2P59780 193 aa13.02□□□□□ -0.33
TCOF1-207ENST00000504761 CCL7P80098 99 aa13.02□□□□□ -0.33
TCOF1-207ENST00000504761 FAM53BQ14153 422 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms