RNA–Protein interactions for RNA: ENST00000503274.1

NIPBL-203, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 789 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-203ENST00000503274 NUCB2P80303 420 aa4.38□□□□□ -1.71
NIPBL-203ENST00000503274 LRRC63Q05C16 580 aa4.38□□□□□ -1.71
NIPBL-203ENST00000503274 ZNF33AQ06730 810 aa4.38□□□□□ -1.71
NIPBL-203ENST00000503274 BST2Q10589 180 aaKnown RBP4.38□□□□□ -1.71
NIPBL-203ENST00000503274 GK2Q14410 553 aaPredicted RBP4.38□□□□□ -1.71
NIPBL-203ENST00000503274 MPPE1Q53F39 396 aa4.38□□□□□ -1.71
NIPBL-203ENST00000503274 DDI2Q5TDH0 399 aa4.38□□□□□ -1.71
NIPBL-203ENST00000503274 ZNF658Q5TYW1 1059 aaPredicted RBP4.38□□□□□ -1.71
NIPBL-203ENST00000503274 WDR25Q64LD2 544 aaPredicted RBP4.38□□□□□ -1.71
NIPBL-203ENST00000503274 CCDC91Q7Z6B0 441 aa4.38□□□□□ -1.71
NIPBL-203ENST00000503274 STHQ8IWL8 128 aa4.38□□□□□ -1.71
NIPBL-203ENST00000503274 UNC45BQ8IWX7 931 aa4.38□□□□□ -1.71
NIPBL-203ENST00000503274 PARP8Q8N3A8 854 aa4.38□□□□□ -1.71
NIPBL-203ENST00000503274 C10orf53Q8N6V4 93 aa4.38□□□□□ -1.71
NIPBL-203ENST00000503274 DDI1Q8WTU0 396 aa4.38□□□□□ -1.71
NIPBL-203ENST00000503274 TCEAL3Q969E4 200 aa4.38□□□□□ -1.71
NIPBL-203ENST00000503274 RBM18Q96H35 190 aaKnown RBP4.38□□□□□ -1.71
NIPBL-203ENST00000503274 GABRG3Q99928 467 aa4.38□□□□□ -1.71
NIPBL-203ENST00000503274 TRIM62Q9BVG3 475 aa4.38□□□□□ -1.71
NIPBL-203ENST00000503274 NUP58Q9BVL2 599 aa4.38□□□□□ -1.71
NIPBL-203ENST00000503274 SLC26A1Q9H2B4 701 aa4.38□□□□□ -1.71
NIPBL-203ENST00000503274 GANQ9H2C0 597 aa4.38□□□□□ -1.71
NIPBL-203ENST00000503274 ELL3Q9HB65 397 aaPredicted RBP4.38□□□□□ -1.71
NIPBL-203ENST00000503274 CISHQ9NSE2 258 aa4.38□□□□□ -1.71
NIPBL-203ENST00000503274 ABCC13Q9NSE7 274 aa4.38□□□□□ -1.71
NIPBL-203ENST00000503274 CUTCQ9NTM9 273 aa4.38□□□□□ -1.71
NIPBL-203ENST00000503274 DHRS4-AS1Q9P1J3 65 aa4.38□□□□□ -1.71
NIPBL-203ENST00000503274 SLC6A5Q9Y345 797 aa4.38□□□□□ -1.71
NIPBL-203ENST00000503274 PKD1L2Q7Z442 2459 aa4.37□□□□□ -1.71
NIPBL-203ENST00000503274 EML5Q05BV3 1969 aa4.37□□□□□ -1.71
NIPBL-203ENST00000503274 IGHV1OR15-9A0A0B4J2B8 117 aa4.37□□□□□ -1.71
NIPBL-203ENST00000503274 BICDL2A1A5D9 508 aa4.37□□□□□ -1.71
NIPBL-203ENST00000503274 YJEFN3A6XGL0 299 aa4.37□□□□□ -1.71
NIPBL-203ENST00000503274 CDX4O14627 284 aaPredicted RBP4.37□□□□□ -1.71
NIPBL-203ENST00000503274 XPO1O14980 1071 aaKnown RBP4.37□□□□□ -1.71
NIPBL-203ENST00000503274 KBTBD11O94819 623 aa4.37□□□□□ -1.71
NIPBL-203ENST00000503274 FGFR1OPO95684 399 aaKnown RBP4.37□□□□□ -1.71
NIPBL-203ENST00000503274 GNA14O95837 355 aa4.37□□□□□ -1.71
NIPBL-203ENST00000503274 PROS1P07225 676 aa4.37□□□□□ -1.71
NIPBL-203ENST00000503274 PAEPP09466 180 aa4.37□□□□□ -1.71
NIPBL-203ENST00000503274 CISD3P0C7P0 127 aa4.37□□□□□ -1.71
NIPBL-203ENST00000503274 VDRP11473 427 aa4.37□□□□□ -1.71
NIPBL-203ENST00000503274 GABRG2P18507 467 aa4.37□□□□□ -1.71
NIPBL-203ENST00000503274 TKTL1P51854 596 aa4.37□□□□□ -1.71
NIPBL-203ENST00000503274 CUL2Q13617 745 aa4.37□□□□□ -1.71
NIPBL-203ENST00000503274 TRADDQ15628 312 aa4.37□□□□□ -1.71
NIPBL-203ENST00000503274 Q1RN00 199 aa4.37□□□□□ -1.71
NIPBL-203ENST00000503274 C17orf58Q2M2W7 97 aa4.37□□□□□ -1.71
NIPBL-203ENST00000503274 GOLGA7BQ2TAP0 167 aa4.37□□□□□ -1.71
NIPBL-203ENST00000503274 ANKRD55Q3KP44 614 aa4.37□□□□□ -1.71
NIPBL-203ENST00000503274 CCDC40Q4G0X9 1142 aa4.37□□□□□ -1.71
NIPBL-203ENST00000503274 ZCWPW2Q504Y3 356 aa4.37□□□□□ -1.71
NIPBL-203ENST00000503274 C1orf220Q5T0J3 134 aa4.37□□□□□ -1.71
NIPBL-203ENST00000503274 ATAD3CQ5T2N8 411 aa4.37□□□□□ -1.71
NIPBL-203ENST00000503274 ABRAXAS1Q6UWZ7 409 aa4.37□□□□□ -1.71
NIPBL-203ENST00000503274 SH2D6Q7Z4S9 175 aa4.37□□□□□ -1.71
NIPBL-203ENST00000503274 SCD5Q86SK9 330 aa4.37□□□□□ -1.71
NIPBL-203ENST00000503274 FBXO25Q8TCJ0 367 aa4.37□□□□□ -1.71
NIPBL-203ENST00000503274 TMA16Q96EY4 203 aaKnown RBP4.37□□□□□ -1.71
NIPBL-203ENST00000503274 DHTKD1Q96HY7 919 aaPredicted RBP4.37□□□□□ -1.71
NIPBL-203ENST00000503274 ULBP1Q9BZM6 244 aa4.37□□□□□ -1.71
NIPBL-203ENST00000503274 SLC25A19Q9HC21 320 aa4.37□□□□□ -1.71
NIPBL-203ENST00000503274 ZDHHC4Q9NPG8 344 aa4.37□□□□□ -1.71
NIPBL-203ENST00000503274 ZNF446Q9NWS9 450 aa4.37□□□□□ -1.71
NIPBL-203ENST00000503274 ELOVL2Q9NXB9 296 aa4.37□□□□□ -1.71
NIPBL-203ENST00000503274 ARMCX1Q9P291 453 aa4.37□□□□□ -1.71
NIPBL-203ENST00000503274 HMGXB4Q9UGU5 601 aa4.37□□□□□ -1.71
NIPBL-203ENST00000503274 SUN2Q9UH99 717 aa4.37□□□□□ -1.71
NIPBL-203ENST00000503274 COQ4Q9Y3A0 265 aa4.37□□□□□ -1.71
NIPBL-203ENST00000503274 ITPR1Q14643 2758 aa4.37□□□□□ -1.71
NIPBL-203ENST00000503274 GOLGA4Q13439 2230 aaKnown RBP4.37□□□□□ -1.71
NIPBL-203ENST00000503274 LAMA5O15230 3695 aa4.36□□□□□ -1.71
NIPBL-203ENST00000503274 A0A1W2PRV1 198 aa4.36□□□□□ -1.71
NIPBL-203ENST00000503274 C5orf51A6NDU8 294 aa4.36□□□□□ -1.71
NIPBL-203ENST00000503274 ZNF487B1APH4 448 aa4.36□□□□□ -1.71
NIPBL-203ENST00000503274 WASH3PC4AMC7 463 aa4.36□□□□□ -1.71
NIPBL-203ENST00000503274 MCF2LO15068 1137 aa4.36□□□□□ -1.71
NIPBL-203ENST00000503274 MED7O43513 233 aa4.36□□□□□ -1.71
NIPBL-203ENST00000503274 TSPAN2O60636 221 aa4.36□□□□□ -1.71
NIPBL-203ENST00000503274 SRPX2O60687 465 aaPredicted RBP4.36□□□□□ -1.71
NIPBL-203ENST00000503274 HSD17B1P14061 328 aa4.36□□□□□ -1.71
NIPBL-203ENST00000503274 FERP16591 822 aa4.36□□□□□ -1.71
NIPBL-203ENST00000503274 POLR2EP19388 210 aaKnown RBP4.36□□□□□ -1.71
NIPBL-203ENST00000503274 ACADSBP45954 432 aa4.36□□□□□ -1.71
NIPBL-203ENST00000503274 TRA2BP62995 288 aaKnown RBP4.36□□□□□ -1.71
NIPBL-203ENST00000503274 CDKL1Q00532 357 aa4.36□□□□□ -1.71
NIPBL-203ENST00000503274 ADIGQ0VDE8 80 aa4.36□□□□□ -1.71
NIPBL-203ENST00000503274 MSLNQ13421 630 aaPredicted RBP4.36□□□□□ -1.71
NIPBL-203ENST00000503274 PNOCQ13519 176 aa4.36□□□□□ -1.71
NIPBL-203ENST00000503274 ABRAXAS2Q15018 415 aa4.36□□□□□ -1.71
NIPBL-203ENST00000503274 TTC31Q49AM3 519 aaPredicted RBP4.36□□□□□ -1.71
NIPBL-203ENST00000503274 UNC50Q53HI1 259 aa4.36□□□□□ -1.71
NIPBL-203ENST00000503274 LINC00242Q5T6M2 205 aa4.36□□□□□ -1.71
NIPBL-203ENST00000503274 RTL6Q6ICC9 239 aa4.36□□□□□ -1.71
NIPBL-203ENST00000503274 DEFB119Q8N690 84 aa4.36□□□□□ -1.71
NIPBL-203ENST00000503274 ZNF491Q8N8L2 437 aa4.36□□□□□ -1.71
NIPBL-203ENST00000503274 DEFB124Q8NES8 71 aa4.36□□□□□ -1.71
NIPBL-203ENST00000503274 OR2T3Q8NH03 318 aa4.36□□□□□ -1.71
NIPBL-203ENST00000503274 UBA3Q8TBC4 463 aa4.36□□□□□ -1.71
NIPBL-203ENST00000503274 RNASE8Q8TDE3 154 aaKnown RBP4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms