RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 IFNA2P01563 188 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 IFNA14P01570 189 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 IGKV3-15P01624 115 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 WNT1P04628 370 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 LCKP06239 509 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 INAFM2P0DMQ5 153 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 ANP32AP39687 249 aaKnown RBP1.29□□□□□ -2.2
XRN1-214ENST00000498077 CEACAM3P40198 252 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 PNLIPRP2P54317 469 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 RAB8AP61006 207 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 YWHAGP61981 247 aaKnown RBP eCLIP1.29□□□□□ -2.2
XRN1-214ENST00000498077 ZNF33AQ06730 810 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 MGAT3Q09327 533 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 GSTA3Q16772 222 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 FLYWCH1Q4VC44 716 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 MDH1BQ5I0G3 518 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 ACER2Q5QJU3 275 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 RNF187Q5TA31 235 aaPredicted RBP1.29□□□□□ -2.2
XRN1-214ENST00000498077 ITPRIPL1Q6GPH6 555 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 IZUMO2Q6UXV1 221 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 SLC16A14Q7RTX9 510 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 PDSS2Q86YH6 399 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 ZNF440Q8IYI8 595 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 DCP1BQ8IZD4 617 aaKnown RBP1.29□□□□□ -2.2
XRN1-214ENST00000498077 OR8H3Q8N146 312 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 CLIP4Q8N3C7 705 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 EIF1ADQ8N9N8 165 aaKnown RBP1.29□□□□□ -2.2
XRN1-214ENST00000498077 C7orf57Q8NEG2 295 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 ABHD11Q8NFV4 315 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 OR10H5Q8NGA6 315 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 OR4A15Q8NGL6 344 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 OR9Q1Q8NGQ5 310 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 OR9A4Q8NGU2 314 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 ASB15Q8WXK1 588 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 PRCCQ92733 491 aaPredicted RBP1.29□□□□□ -2.2
XRN1-214ENST00000498077 HDAC2Q92769 488 aaKnown RBP1.29□□□□□ -2.2
XRN1-214ENST00000498077 SNAPC3Q92966 411 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 FATE1Q969F0 183 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 OTUB1Q96FW1 271 aaPredicted RBP1.29□□□□□ -2.2
XRN1-214ENST00000498077 PRICKLE1Q96MT3 831 aaPredicted RBP1.29□□□□□ -2.2
XRN1-214ENST00000498077 TP53RKQ96S44 253 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 MPHOSPH9Q99550 1183 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 FAM173AQ9BQD7 235 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 MRPL45Q9BRJ2 306 aaKnown RBP1.29□□□□□ -2.2
XRN1-214ENST00000498077 GABARAPL1Q9H0R8 117 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 PCED1AQ9H1Q7 454 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 LRRN3Q9H3W5 708 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 C1orf115Q9H7X2 142 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 TMEM51Q9NW97 253 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 RDH8Q9NYR8 311 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 ZNF180Q9UJW8 692 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 BARX2Q9UMQ3 279 aaPredicted RBP1.29□□□□□ -2.2
XRN1-214ENST00000498077 KLF13Q9Y2Y9 288 aaPredicted RBP1.29□□□□□ -2.2
XRN1-214ENST00000498077 LSM4Q9Y4Z0 139 aaKnown RBP1.29□□□□□ -2.2
XRN1-214ENST00000498077 WSB1Q9Y6I7 421 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 IGHV2OR16-5A0A0B4J2B6 119 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 CCDC189A1A4V9 331 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 C2CD4BA6NLJ0 364 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 MEI4A8MW99 385 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 STX16O14662 325 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 RS1O15537 224 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 CHST10O43529 356 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 FRS3O43559 492 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 OPHN1O60890 802 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 EIF3GO75821 320 aaKnown RBP eCLIP1.29□□□□□ -2.2
XRN1-214ENST00000498077 OR2F2O95006 317 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 ASMTLO95671 621 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 TRUB2O95900 331 aaKnown RBP1.29□□□□□ -2.2
XRN1-214ENST00000498077 GRPP07492 148 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 FCGR3AP08637 254 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 C8orf89P0DMQ9 161 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 CT45A6P0DMU7 189 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 CT45A5P0DMU8 189 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 CT45A7P0DMV0 189 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 PPIAL4GP0DN37 164 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 SCGB1A1P11684 91 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 TMEM11P17152 192 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 CPT2P23786 658 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 G0S2P27469 103 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 CD1CP29017 333 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 CYB561P49447 251 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 NOVA1P51513 510 aaKnown RBP1.29□□□□□ -2.2
XRN1-214ENST00000498077 ZNF84P51523 738 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 GPR143P51810 404 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 PRKCZQ05513 592 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 DLX2Q07687 328 aaPredicted RBP1.29□□□□□ -2.2
XRN1-214ENST00000498077 NFATC2Q13469 925 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 HES1Q14469 280 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 TESK1Q15569 626 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 DLG2Q15700 870 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 GRK1Q15835 563 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 ZNF311Q5JNZ3 666 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 DCAF12Q5T6F0 453 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 SYDE2Q5VT97 1194 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 LEG1Q6P5S2 330 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 LCN15Q6UWW0 184 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 ANGPTL8Q6UXH0 198 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 KATNAL2Q8IYT4 538 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 CARFQ8N187 725 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 SIRT6Q8N6T7 355 aa1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms