RNA–Protein interactions for RNA: ENST00000498058.1

PRKCB-209, Transcript of protein kinase C beta, humanhuman

TSL 3 BASIC

Gene PRKCB, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-209ENST00000498058 GTF2IRD2BQ6EKJ0 949 aa16.45■□□□□ 0.22
PRKCB-209ENST00000498058 GTF2IRD2Q86UP8 949 aa16.45■□□□□ 0.22
PRKCB-209ENST00000498058 MIER2Q8N344 545 aa16.45■□□□□ 0.22
PRKCB-209ENST00000498058 CCDC197Q8NCU1 140 aa16.45■□□□□ 0.22
PRKCB-209ENST00000498058 STEAP2Q8NFT2 490 aa16.45■□□□□ 0.22
PRKCB-209ENST00000498058 OR56A1Q8NGH5 318 aa16.45■□□□□ 0.22
PRKCB-209ENST00000498058 BCAS4Q8TDM0 211 aa16.45■□□□□ 0.22
PRKCB-209ENST00000498058 ZFP90Q8TF47 636 aa16.45■□□□□ 0.22
PRKCB-209ENST00000498058 SDF2Q99470 211 aa16.45■□□□□ 0.22
PRKCB-209ENST00000498058 ZBTB18Q99592 522 aa16.45■□□□□ 0.22
PRKCB-209ENST00000498058 PRPF18Q99633 342 aaKnown RBP16.45■□□□□ 0.22
PRKCB-209ENST00000498058 DTNAQ9Y4J8 743 aa16.45■□□□□ 0.22
PRKCB-209ENST00000498058 GPC6Q9Y625 555 aaPredicted RBP16.45■□□□□ 0.22
PRKCB-209ENST00000498058 C9JVG2 144 aa16.44■□□□□ 0.22
PRKCB-209ENST00000498058 OVOL3O00110 214 aa16.44■□□□□ 0.22
PRKCB-209ENST00000498058 H6PDO95479 791 aa16.44■□□□□ 0.22
PRKCB-209ENST00000498058 ALDOCP09972 364 aaKnown RBP16.44■□□□□ 0.22
PRKCB-209ENST00000498058 DANCRP0C864 163 aa16.44■□□□□ 0.22
PRKCB-209ENST00000498058 SUMO3P55854 103 aaPredicted RBP16.44■□□□□ 0.22
PRKCB-209ENST00000498058 HBA1P69905 142 aa16.44■□□□□ 0.22
PRKCB-209ENST00000498058 SQLEQ14534 574 aa16.44■□□□□ 0.22
PRKCB-209ENST00000498058 QPRTQ15274 297 aa16.44■□□□□ 0.22
PRKCB-209ENST00000498058 RNPS1Q15287 305 aaKnown RBP16.44■□□□□ 0.22
PRKCB-209ENST00000498058 PDCD4Q53EL6 469 aaKnown RBP16.44■□□□□ 0.22
PRKCB-209ENST00000498058 ADAM5Q6NVV9 412 aa16.44■□□□□ 0.22
PRKCB-209ENST00000498058 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.44■□□□□ 0.22
PRKCB-209ENST00000498058 ZNF614Q8N883 585 aa16.44■□□□□ 0.22
PRKCB-209ENST00000498058 MAPK1IP1LQ8NDC0 245 aa16.44■□□□□ 0.22
PRKCB-209ENST00000498058 SFXN5Q8TD22 340 aa16.44■□□□□ 0.22
PRKCB-209ENST00000498058 ZNF775Q96BV0 537 aaPredicted RBP16.44■□□□□ 0.22
PRKCB-209ENST00000498058 PSD2Q9BQI7 771 aa16.44■□□□□ 0.22
PRKCB-209ENST00000498058 DPY30Q9C005 99 aa16.44■□□□□ 0.22
PRKCB-209ENST00000498058 HOXD1Q9GZZ0 328 aa16.44■□□□□ 0.22
PRKCB-209ENST00000498058 QRSL1Q9H0R6 528 aaKnown RBP16.44■□□□□ 0.22
PRKCB-209ENST00000498058 CXorf56Q9H5V9 222 aa16.44■□□□□ 0.22
PRKCB-209ENST00000498058 TMEM45AQ9NWC5 275 aa16.44■□□□□ 0.22
PRKCB-209ENST00000498058 ZIM2Q9NZV7 527 aa16.44■□□□□ 0.22
PRKCB-209ENST00000498058 PRSS50Q9UI38 385 aa16.44■□□□□ 0.22
PRKCB-209ENST00000498058 FAF1Q9UNN5 650 aaPredicted RBP16.44■□□□□ 0.22
PRKCB-209ENST00000498058 DPRXA6NFQ7 191 aa16.43■□□□□ 0.22
PRKCB-209ENST00000498058 GTPBP1O00178 669 aaKnown RBP16.43■□□□□ 0.22
PRKCB-209ENST00000498058 ETV2O00321 342 aaPredicted RBP16.43■□□□□ 0.22
PRKCB-209ENST00000498058 FCMRO60667 390 aa16.43■□□□□ 0.22
PRKCB-209ENST00000498058 DCTN3O75935 186 aa16.43■□□□□ 0.22
PRKCB-209ENST00000498058 PRKD3O94806 890 aa16.43■□□□□ 0.22
PRKCB-209ENST00000498058 YES1P07947 543 aa16.43■□□□□ 0.22
PRKCB-209ENST00000498058 PABPC4LP0CB38 370 aaKnown RBP16.43■□□□□ 0.22
PRKCB-209ENST00000498058 MRPL19P49406 292 aaKnown RBP16.43■□□□□ 0.22
PRKCB-209ENST00000498058 CLDN8P56748 225 aa16.43■□□□□ 0.22
PRKCB-209ENST00000498058 DPY19L1Q2PZI1 675 aa16.43■□□□□ 0.22
PRKCB-209ENST00000498058 SPDYE7PQ495Y7 208 aa16.43■□□□□ 0.22
PRKCB-209ENST00000498058 PDZK1Q5T2W1 519 aa16.43■□□□□ 0.22
PRKCB-209ENST00000498058 CLECL1Q8IZS7 167 aa16.43■□□□□ 0.22
PRKCB-209ENST00000498058 ZNF527Q8NB42 609 aa16.43■□□□□ 0.22
PRKCB-209ENST00000498058 GLB1L3Q8NCI6 653 aaPredicted RBP16.43■□□□□ 0.22
PRKCB-209ENST00000498058 OR5W2Q8NH69 310 aa16.43■□□□□ 0.22
PRKCB-209ENST00000498058 REXO5Q96IC2 774 aaKnown RBP16.43■□□□□ 0.22
PRKCB-209ENST00000498058 MRGPRX4Q96LA9 322 aa16.43■□□□□ 0.22
PRKCB-209ENST00000498058 ZNF300Q96RE9 604 aaPredicted RBP16.43■□□□□ 0.22
PRKCB-209ENST00000498058 HDHD5Q9BXW7 423 aa16.43■□□□□ 0.22
PRKCB-209ENST00000498058 BCO1Q9HAY6 547 aa16.43■□□□□ 0.22
PRKCB-209ENST00000498058 FANCFQ9NPI8 374 aa16.43■□□□□ 0.22
PRKCB-209ENST00000498058 SDR39U1Q9NRG7 319 aaPredicted RBP16.43■□□□□ 0.22
PRKCB-209ENST00000498058 ATAD3AQ9NVI7 634 aa16.43■□□□□ 0.22
PRKCB-209ENST00000498058 RNF115Q9Y4L5 304 aa16.43■□□□□ 0.22
PRKCB-209ENST00000498058 GPR45Q9Y5Y3 372 aa16.43■□□□□ 0.22
PRKCB-209ENST00000498058 SONP18583 2426 aaKnown RBP16.43■□□□□ 0.22
PRKCB-209ENST00000498058 RTTNQ86VV8 2226 aa16.42■□□□□ 0.22
PRKCB-209ENST00000498058 FBN1P35555 2871 aaKnown RBP16.42■□□□□ 0.22
PRKCB-209ENST00000498058 SMAD9O15198 467 aaKnown RBP16.42■□□□□ 0.22
PRKCB-209ENST00000498058 CLOCKO15516 846 aa16.42■□□□□ 0.22
PRKCB-209ENST00000498058 ZNF264O43296 627 aa16.42■□□□□ 0.22
PRKCB-209ENST00000498058 DNAJA2O60884 412 aa16.42■□□□□ 0.22
PRKCB-209ENST00000498058 BCAS1O75363 584 aaPredicted RBP16.42■□□□□ 0.22
PRKCB-209ENST00000498058 SLC22A3O75751 556 aa16.42■□□□□ 0.22
PRKCB-209ENST00000498058 CDKN1AP38936 164 aa16.42■□□□□ 0.22
PRKCB-209ENST00000498058 CASP9P55211 416 aa16.42■□□□□ 0.22
PRKCB-209ENST00000498058 C21orf58P58505 322 aa16.42■□□□□ 0.22
PRKCB-209ENST00000498058 RPS4XP62701 263 aaKnown RBP16.42■□□□□ 0.22
PRKCB-209ENST00000498058 CBX1P83916 185 aa16.42■□□□□ 0.22
PRKCB-209ENST00000498058 KBTBD8Q8NFY9 601 aa16.42■□□□□ 0.22
PRKCB-209ENST00000498058 TACO1Q9BSH4 297 aaKnown RBP16.42■□□□□ 0.22
PRKCB-209ENST00000498058 DUSP26Q9BV47 211 aa16.42■□□□□ 0.22
PRKCB-209ENST00000498058 BHLHE41Q9C0J9 482 aaPredicted RBP16.42■□□□□ 0.22
PRKCB-209ENST00000498058 GP6Q9HCN6 339 aa16.42■□□□□ 0.22
PRKCB-209ENST00000498058 TIGARQ9NQ88 270 aa16.42■□□□□ 0.22
PRKCB-209ENST00000498058 MAGED1Q9Y5V3 778 aaPredicted RBP16.42■□□□□ 0.22
PRKCB-209ENST00000498058 ALPK2Q86TB3 2170 aa16.41■□□□□ 0.22
PRKCB-209ENST00000498058 SERINC4A6NH21 518 aa16.41■□□□□ 0.22
PRKCB-209ENST00000498058 GJE1A6NN92 205 aa16.41■□□□□ 0.22
PRKCB-209ENST00000498058 H3BNH8 94 aa16.41■□□□□ 0.22
PRKCB-209ENST00000498058 SLC22A2O15244 555 aa16.41■□□□□ 0.22
PRKCB-209ENST00000498058 CFLARO15519 480 aa16.41■□□□□ 0.22
PRKCB-209ENST00000498058 EIF4E2O60573 245 aaKnown RBP16.41■□□□□ 0.22
PRKCB-209ENST00000498058 TMCC2O75069 709 aa16.41■□□□□ 0.22
PRKCB-209ENST00000498058 NDUFS7O75251 213 aa16.41■□□□□ 0.22
PRKCB-209ENST00000498058 C1QCP02747 245 aa16.41■□□□□ 0.22
PRKCB-209ENST00000498058 THBS1P07996 1170 aa16.41■□□□□ 0.22
PRKCB-209ENST00000498058 UBL4AP11441 157 aa16.41■□□□□ 0.22
PRKCB-209ENST00000498058 IL32P24001 234 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms