RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 CDC42EP4Q9H3Q1 356 aaKnown RBP2.17□□□□□ -2.06
RIF1-212ENST00000498041 CENPHQ9H3R5 247 aa2.17□□□□□ -2.06
RIF1-212ENST00000498041 ASB7Q9H672 318 aa2.17□□□□□ -2.06
RIF1-212ENST00000498041 SUDS3Q9H7L9 328 aaPredicted RBP2.17□□□□□ -2.06
RIF1-212ENST00000498041 CAB39LQ9H9S4 337 aa2.17□□□□□ -2.06
RIF1-212ENST00000498041 RNPEPL1Q9HAU8 725 aa2.17□□□□□ -2.06
RIF1-212ENST00000498041 FAM212BQ9NTI7 297 aaPredicted RBP2.17□□□□□ -2.06
RIF1-212ENST00000498041 CUTCQ9NTM9 273 aa2.17□□□□□ -2.06
RIF1-212ENST00000498041 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP2.17□□□□□ -2.06
RIF1-212ENST00000498041 SLC17A7Q9P2U7 560 aa2.17□□□□□ -2.06
RIF1-212ENST00000498041 TBK1Q9UHD2 729 aa2.17□□□□□ -2.06
RIF1-212ENST00000498041 CIDEBQ9UHD4 219 aa2.17□□□□□ -2.06
RIF1-212ENST00000498041 TEKT2Q9UIF3 430 aa2.17□□□□□ -2.06
RIF1-212ENST00000498041 VANGL2Q9ULK5 521 aa2.17□□□□□ -2.06
RIF1-212ENST00000498041 KCNK6Q9Y257 313 aa2.17□□□□□ -2.06
RIF1-212ENST00000498041 VSIG4Q9Y279 399 aa2.17□□□□□ -2.06
RIF1-212ENST00000498041 SLC6A5Q9Y345 797 aa2.17□□□□□ -2.06
RIF1-212ENST00000498041 NAALAD2Q9Y3Q0 740 aa2.17□□□□□ -2.06
RIF1-212ENST00000498041 CHD8Q9HCK8 2581 aa2.17□□□□□ -2.06
RIF1-212ENST00000498041 KIAA0100Q14667 2235 aaKnown RBP2.17□□□□□ -2.06
RIF1-212ENST00000498041 HELZP42694 1942 aaKnown RBP2.17□□□□□ -2.06
RIF1-212ENST00000498041 MYO9BQ13459 2157 aa2.16□□□□□ -2.06
RIF1-212ENST00000498041 TDRD6O60522 2096 aaKnown RBP2.16□□□□□ -2.06
RIF1-212ENST00000498041 DOCK8Q8NF50 2099 aa2.16□□□□□ -2.06
RIF1-212ENST00000498041 A0A1W2PQ67 120 aa2.16□□□□□ -2.06
RIF1-212ENST00000498041 A0A1W2PRQ8 180 aa2.16□□□□□ -2.06
RIF1-212ENST00000498041 TMEM129A0AVI4 362 aa2.16□□□□□ -2.06
RIF1-212ENST00000498041 RNF212BA8MTL3 300 aa2.16□□□□□ -2.06
RIF1-212ENST00000498041 BTNL10A8MVZ5 291 aa2.16□□□□□ -2.06
RIF1-212ENST00000498041 KLLNB2CW77 178 aa2.16□□□□□ -2.06
RIF1-212ENST00000498041 H7C0C1 242 aa2.16□□□□□ -2.06
RIF1-212ENST00000498041 DFFAO00273 331 aa2.16□□□□□ -2.06
RIF1-212ENST00000498041 E2F3O00716 465 aa2.16□□□□□ -2.06
RIF1-212ENST00000498041 XPO1O14980 1071 aaKnown RBP2.16□□□□□ -2.06
RIF1-212ENST00000498041 COCHO43405 550 aa2.16□□□□□ -2.06
RIF1-212ENST00000498041 HUS1O60921 280 aa2.16□□□□□ -2.06
RIF1-212ENST00000498041 ANXA9O76027 345 aa2.16□□□□□ -2.06
RIF1-212ENST00000498041 CPNE6O95741 557 aa2.16□□□□□ -2.06
RIF1-212ENST00000498041 GAS8O95995 478 aa2.16□□□□□ -2.06
RIF1-212ENST00000498041 C1QCP02747 245 aa2.16□□□□□ -2.06
RIF1-212ENST00000498041 HLA-DQB2P05538 268 aa2.16□□□□□ -2.06
RIF1-212ENST00000498041 CA3P07451 260 aa2.16□□□□□ -2.06
RIF1-212ENST00000498041 PAEPP09466 180 aa2.16□□□□□ -2.06
RIF1-212ENST00000498041 FOSL2P15408 326 aa2.16□□□□□ -2.06
RIF1-212ENST00000498041 PPP2R1BP30154 601 aa2.16□□□□□ -2.06
RIF1-212ENST00000498041 CD70P32970 193 aa2.16□□□□□ -2.06
RIF1-212ENST00000498041 SERPINB6P35237 376 aa2.16□□□□□ -2.06
RIF1-212ENST00000498041 ATP5OP48047 213 aa2.16□□□□□ -2.06
RIF1-212ENST00000498041 STK19P49842 368 aaPredicted RBP2.16□□□□□ -2.06
RIF1-212ENST00000498041 HADHBP55084 474 aaKnown RBP2.16□□□□□ -2.06
RIF1-212ENST00000498041 RWDD2BP57060 319 aa2.16□□□□□ -2.06
RIF1-212ENST00000498041 STX1BP61266 288 aa2.16□□□□□ -2.06
RIF1-212ENST00000498041 YWHAGP61981 247 aaKnown RBP eCLIP2.16□□□□□ -2.06
RIF1-212ENST00000498041 SNRPFP62306 86 aaKnown RBP2.16□□□□□ -2.06
RIF1-212ENST00000498041 TRA2BP62995 288 aaKnown RBP2.16□□□□□ -2.06
RIF1-212ENST00000498041 DR1Q01658 176 aa2.16□□□□□ -2.06
RIF1-212ENST00000498041 NAAAQ02083 359 aa2.16□□□□□ -2.06
RIF1-212ENST00000498041 MSLNQ13421 630 aaPredicted RBP2.16□□□□□ -2.06
RIF1-212ENST00000498041 DPYSQ14117 519 aa2.16□□□□□ -2.06
RIF1-212ENST00000498041 BTG3Q14201 252 aaPredicted RBP2.16□□□□□ -2.06
RIF1-212ENST00000498041 SMC1AQ14683 1233 aaKnown RBP2.16□□□□□ -2.06
RIF1-212ENST00000498041 OR1C1Q15619 314 aa2.16□□□□□ -2.06
RIF1-212ENST00000498041 WHAMMP3Q1A5X7 153 aa2.16□□□□□ -2.06
RIF1-212ENST00000498041 DCAF4L1Q3SXM0 396 aa2.16□□□□□ -2.06
RIF1-212ENST00000498041 FUT11Q495W5 492 aa2.16□□□□□ -2.06
RIF1-212ENST00000498041 MS4A13Q5J8X5 152 aa2.16□□□□□ -2.06
RIF1-212ENST00000498041 ARMC12Q5T9G4 340 aa2.16□□□□□ -2.06
RIF1-212ENST00000498041 TMEM215Q68D42 235 aa2.16□□□□□ -2.06
RIF1-212ENST00000498041 C8orf74Q6P047 294 aa2.16□□□□□ -2.06
RIF1-212ENST00000498041 CD164L2Q6UWJ8 174 aa2.16□□□□□ -2.06
RIF1-212ENST00000498041 TPGS1Q6ZTW0 290 aa2.16□□□□□ -2.06
RIF1-212ENST00000498041 TMEM25Q86YD3 366 aa2.16□□□□□ -2.06
RIF1-212ENST00000498041 TMEM126BQ8IUX1 230 aa2.16□□□□□ -2.06
RIF1-212ENST00000498041 ZNF567Q8N184 647 aa2.16□□□□□ -2.06
RIF1-212ENST00000498041 C4orf33Q8N1A6 199 aa2.16□□□□□ -2.06
RIF1-212ENST00000498041 RNF10Q8N5U6 811 aaKnown RBP2.16□□□□□ -2.06
RIF1-212ENST00000498041 CEP112Q8N8E3 955 aa2.16□□□□□ -2.06
RIF1-212ENST00000498041 SNX31Q8N9S9 440 aa2.16□□□□□ -2.06
RIF1-212ENST00000498041 KLHL30-AS1Q8NEE0 82 aa2.16□□□□□ -2.06
RIF1-212ENST00000498041 OR6T1Q8NGN1 323 aa2.16□□□□□ -2.06
RIF1-212ENST00000498041 OR1K1Q8NGR3 316 aa2.16□□□□□ -2.06
RIF1-212ENST00000498041 FLVCR1-AS1Q8TAF5 88 aa2.16□□□□□ -2.06
RIF1-212ENST00000498041 FIBINQ8TAL6 211 aa2.16□□□□□ -2.06
RIF1-212ENST00000498041 ARNTL2Q8WYA1 636 aa2.16□□□□□ -2.06
RIF1-212ENST00000498041 NTNG2Q96CW9 530 aa2.16□□□□□ -2.06
RIF1-212ENST00000498041 C16orf58Q96GQ5 468 aa2.16□□□□□ -2.06
RIF1-212ENST00000498041 PKNOX2Q96KN3 472 aa2.16□□□□□ -2.06
RIF1-212ENST00000498041 CSPG4P5Q96PW8 444 aa2.16□□□□□ -2.06
RIF1-212ENST00000498041 ERP44Q9BS26 406 aa2.16□□□□□ -2.06
RIF1-212ENST00000498041 SHCBP1LQ9BZQ2 653 aa2.16□□□□□ -2.06
RIF1-212ENST00000498041 C20orf27Q9GZN8 174 aa2.16□□□□□ -2.06
RIF1-212ENST00000498041 WWP1Q9H0M0 922 aa2.16□□□□□ -2.06
RIF1-212ENST00000498041 CYP3A43Q9HB55 503 aa2.16□□□□□ -2.06
RIF1-212ENST00000498041 TMBIM4Q9HC24 238 aa2.16□□□□□ -2.06
RIF1-212ENST00000498041 TNFRSF19Q9NS68 423 aa2.16□□□□□ -2.06
RIF1-212ENST00000498041 DHRS4-AS1Q9P1J3 65 aa2.16□□□□□ -2.06
RIF1-212ENST00000498041 CGNQ9P2M7 1197 aaKnown RBP2.16□□□□□ -2.06
RIF1-212ENST00000498041 ADAM28Q9UKQ2 775 aa2.16□□□□□ -2.06
RIF1-212ENST00000498041 CDH9Q9ULB4 789 aa2.16□□□□□ -2.06
RIF1-212ENST00000498041 CHMP2BQ9UQN3 213 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms