RNA–Protein interactions for RNA: ENST00000497311.5

SMC4-226, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-226ENST00000497311 MAPK14Q16539 360 aa15.19■□□□□ 0.02
SMC4-226ENST00000497311 SYT14P1Q58G82 188 aa15.19■□□□□ 0.02
SMC4-226ENST00000497311 TYW3Q6IPR3 259 aaKnown RBP15.19■□□□□ 0.02
SMC4-226ENST00000497311 TNFAIP8L2Q6P589 184 aaPredicted RBP15.19■□□□□ 0.02
SMC4-226ENST00000497311 GALNT5Q7Z7M9 940 aa15.19■□□□□ 0.02
SMC4-226ENST00000497311 CROCCP2Q86T23 111 aa15.19■□□□□ 0.02
SMC4-226ENST00000497311 KIRREL3Q8IZU9 778 aa15.19■□□□□ 0.02
SMC4-226ENST00000497311 ZNF563Q8TA94 476 aa15.19■□□□□ 0.02
SMC4-226ENST00000497311 RAB8BQ92930 207 aa15.19■□□□□ 0.02
SMC4-226ENST00000497311 TESCQ96BS2 214 aa15.19■□□□□ 0.02
SMC4-226ENST00000497311 ROPN1LQ96C74 230 aa15.19■□□□□ 0.02
SMC4-226ENST00000497311 TRMT61AQ96FX7 289 aaKnown RBP15.19■□□□□ 0.02
SMC4-226ENST00000497311 ZNF300Q96RE9 604 aaPredicted RBP15.19■□□□□ 0.02
SMC4-226ENST00000497311 C20orf27Q9GZN8 174 aa15.19■□□□□ 0.02
SMC4-226ENST00000497311 SSU72Q9NP77 194 aaKnown RBP15.19■□□□□ 0.02
SMC4-226ENST00000497311 SPIN1Q9Y657 262 aaPredicted RBP15.19■□□□□ 0.02
SMC4-226ENST00000497311 JMJD1CQ15652 2540 aa15.19■□□□□ 0.02
SMC4-226ENST00000497311 CADP27708 2225 aa15.19■□□□□ 0.02
SMC4-226ENST00000497311 TM9SF1O15321 606 aa15.18■□□□□ 0.02
SMC4-226ENST00000497311 ERLIN1O75477 346 aa15.18■□□□□ 0.02
SMC4-226ENST00000497311 FESP07332 822 aa15.18■□□□□ 0.02
SMC4-226ENST00000497311 DANCRP0C864 163 aa15.18■□□□□ 0.02
SMC4-226ENST00000497311 TFPIP10646 304 aa15.18■□□□□ 0.02
SMC4-226ENST00000497311 LBPP18428 481 aa15.18■□□□□ 0.02
SMC4-226ENST00000497311 CHI3L1P36222 383 aaPredicted RBP15.18■□□□□ 0.02
SMC4-226ENST00000497311 CLNS1AP54105 237 aaKnown RBP15.18■□□□□ 0.02
SMC4-226ENST00000497311 PPP2R2BQ00005 443 aa15.18■□□□□ 0.02
SMC4-226ENST00000497311 BSPH1Q075Z2 132 aa15.18■□□□□ 0.02
SMC4-226ENST00000497311 CASP8Q14790 479 aa15.18■□□□□ 0.02
SMC4-226ENST00000497311 STK11Q15831 433 aa15.18■□□□□ 0.02
SMC4-226ENST00000497311 DPY19L1Q2PZI1 675 aa15.18■□□□□ 0.02
SMC4-226ENST00000497311 ZNF672Q499Z4 452 aaPredicted RBP15.18■□□□□ 0.02
SMC4-226ENST00000497311 CEP85LQ5SZL2 805 aa15.18■□□□□ 0.02
SMC4-226ENST00000497311 SAXO2Q658L1 398 aa15.18■□□□□ 0.02
SMC4-226ENST00000497311 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.18■□□□□ 0.02
SMC4-226ENST00000497311 MTDHQ86UE4 582 aaKnown RBP15.18■□□□□ 0.02
SMC4-226ENST00000497311 ZNF100Q8IYN0 542 aa15.18■□□□□ 0.02
SMC4-226ENST00000497311 LRRC34Q8IZ02 419 aa15.18■□□□□ 0.02
SMC4-226ENST00000497311 FAM71CQ8NEG0 241 aa15.18■□□□□ 0.02
SMC4-226ENST00000497311 SMAP2Q8WU79 429 aaPredicted RBP15.18■□□□□ 0.02
SMC4-226ENST00000497311 ZNF75CPQ92670 426 aaPredicted RBP15.18■□□□□ 0.02
SMC4-226ENST00000497311 NEURL3Q96EH8 262 aa15.18■□□□□ 0.02
SMC4-226ENST00000497311 SORT1Q99523 831 aa15.18■□□□□ 0.02
SMC4-226ENST00000497311 NUF2Q9BZD4 464 aa15.18■□□□□ 0.02
SMC4-226ENST00000497311 SAP130Q9H0E3 1048 aa15.18■□□□□ 0.02
SMC4-226ENST00000497311 EMC3Q9P0I2 261 aa15.18■□□□□ 0.02
SMC4-226ENST00000497311 DPRXA6NFQ7 191 aa15.17■□□□□ 0.02
SMC4-226ENST00000497311 OVOL3O00110 214 aa15.17■□□□□ 0.02
SMC4-226ENST00000497311 ANKRD28O15084 1053 aa15.17■□□□□ 0.02
SMC4-226ENST00000497311 SOD3P08294 240 aa15.17■□□□□ 0.02
SMC4-226ENST00000497311 DHRS4L1P0CG22 281 aa15.17■□□□□ 0.02
SMC4-226ENST00000497311 EDNRAP25101 427 aa15.17■□□□□ 0.02
SMC4-226ENST00000497311 RYKP34925 604 aa15.17■□□□□ 0.02
SMC4-226ENST00000497311 KHKP50053 298 aa15.17■□□□□ 0.02
SMC4-226ENST00000497311 TNK1Q13470 666 aa15.17■□□□□ 0.02
SMC4-226ENST00000497311 PPA1Q15181 289 aa15.17■□□□□ 0.02
SMC4-226ENST00000497311 GPAT3Q53EU6 434 aa15.17■□□□□ 0.02
SMC4-226ENST00000497311 TNFAIP8L3Q5GJ75 292 aa15.17■□□□□ 0.02
SMC4-226ENST00000497311 SPANXN4Q5MJ08 99 aa15.17■□□□□ 0.02
SMC4-226ENST00000497311 AP1ARQ63HQ0 302 aa15.17■□□□□ 0.02
SMC4-226ENST00000497311 FRRS1Q6ZNA5 592 aa15.17■□□□□ 0.02
SMC4-226ENST00000497311 SSX8Q7RTT4 187 aa15.17■□□□□ 0.02
SMC4-226ENST00000497311 ATG4DQ86TL0 474 aaPredicted RBP15.17■□□□□ 0.02
SMC4-226ENST00000497311 NEUROG1Q92886 237 aa15.17■□□□□ 0.02
SMC4-226ENST00000497311 GTPBP3Q969Y2 492 aaKnown RBP15.17■□□□□ 0.02
SMC4-226ENST00000497311 MUCL1Q96DR8 90 aa15.17■□□□□ 0.02
SMC4-226ENST00000497311 ZHX1-C8orf76Q96EF9 292 aa15.17■□□□□ 0.02
SMC4-226ENST00000497311 SLC35A5Q9BS91 424 aa15.17■□□□□ 0.02
SMC4-226ENST00000497311 CCDC106Q9BWC9 280 aa15.17■□□□□ 0.02
SMC4-226ENST00000497311 CTPS2Q9NRF8 586 aa15.17■□□□□ 0.02
SMC4-226ENST00000497311 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.17■□□□□ 0.02
SMC4-226ENST00000497311 MARCOQ9UEW3 520 aaPredicted RBP15.17■□□□□ 0.02
SMC4-226ENST00000497311 CHRNA9Q9UGM1 479 aa15.17■□□□□ 0.02
SMC4-226ENST00000497311 HAO1Q9UJM8 370 aa15.17■□□□□ 0.02
SMC4-226ENST00000497311 A0A1W2PP18 115 aa15.16■□□□□ 0.02
SMC4-226ENST00000497311 E9PBE3 544 aa15.16■□□□□ 0.02
SMC4-226ENST00000497311 BCAS1O75363 584 aaPredicted RBP15.16■□□□□ 0.02
SMC4-226ENST00000497311 GGT1P19440 569 aa15.16■□□□□ 0.02
SMC4-226ENST00000497311 COX5AP20674 150 aa15.16■□□□□ 0.02
SMC4-226ENST00000497311 BGNP21810 368 aa15.16■□□□□ 0.02
SMC4-226ENST00000497311 IGHV1-2P23083 117 aa15.16■□□□□ 0.02
SMC4-226ENST00000497311 FKBP2P26885 142 aaKnown RBP15.16■□□□□ 0.02
SMC4-226ENST00000497311 S100A3P33764 101 aa15.16■□□□□ 0.02
SMC4-226ENST00000497311 IDUAP35475 653 aa15.16■□□□□ 0.02
SMC4-226ENST00000497311 KCNJ10P78508 379 aa15.16■□□□□ 0.02
SMC4-226ENST00000497311 HPCAP84074 193 aa15.16■□□□□ 0.02
SMC4-226ENST00000497311 FUT5Q11128 374 aa15.16■□□□□ 0.02
SMC4-226ENST00000497311 STX3Q13277 289 aa15.16■□□□□ 0.02
SMC4-226ENST00000497311 PDK3Q15120 406 aa15.16■□□□□ 0.02
SMC4-226ENST00000497311 ETFDHQ16134 617 aa15.16■□□□□ 0.02
SMC4-226ENST00000497311 CLEC12BQ2HXU8 276 aa15.16■□□□□ 0.02
SMC4-226ENST00000497311 FAM174BQ3ZCQ3 159 aa15.16■□□□□ 0.02
SMC4-226ENST00000497311 TIMM23BQ5SRD1 257 aa15.16■□□□□ 0.02
SMC4-226ENST00000497311 ABLIM2Q6H8Q1 611 aa15.16■□□□□ 0.02
SMC4-226ENST00000497311 SEZ6L2Q6UXD5 910 aa15.16■□□□□ 0.02
SMC4-226ENST00000497311 DNAJC14Q6Y2X3 702 aaPredicted RBP15.16■□□□□ 0.02
SMC4-226ENST00000497311 GRINAQ7Z429 371 aa15.16■□□□□ 0.02
SMC4-226ENST00000497311 P2RY8Q86VZ1 359 aa15.16■□□□□ 0.02
SMC4-226ENST00000497311 ARFGAP2Q8N6H7 521 aa15.16■□□□□ 0.02
SMC4-226ENST00000497311 KBTBD8Q8NFY9 601 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 166.4 ms