RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 MMACHCQ9Y4U1 282 aa12□□□□□ -0.49
GARNL3-220ENST00000496711 RNF215Q9Y6U7 377 aa12□□□□□ -0.49
GARNL3-220ENST00000496711 MAU2Q9Y6X3 613 aa12□□□□□ -0.49
GARNL3-220ENST00000496711 A0A1W2PQL4 384 aaPredicted RBP11.99□□□□□ -0.49
GARNL3-220ENST00000496711 SMIM30A4D0T7 59 aa11.99□□□□□ -0.49
GARNL3-220ENST00000496711 TMEM150CB9EJG8 249 aa11.99□□□□□ -0.49
GARNL3-220ENST00000496711 RNF13O43567 381 aa11.99□□□□□ -0.49
GARNL3-220ENST00000496711 PIAS2O75928 621 aa11.99□□□□□ -0.49
GARNL3-220ENST00000496711 OR2B3O76000 313 aa11.99□□□□□ -0.49
GARNL3-220ENST00000496711 NDUFB2O95178 105 aa11.99□□□□□ -0.49
GARNL3-220ENST00000496711 SPNP16150 400 aa11.99□□□□□ -0.49
GARNL3-220ENST00000496711 KCNAB1Q14722 419 aa11.99□□□□□ -0.49
GARNL3-220ENST00000496711 ZNF362Q5T0B9 420 aaPredicted RBP11.99□□□□□ -0.49
GARNL3-220ENST00000496711 CHRDL2Q6WN34 429 aa11.99□□□□□ -0.49
GARNL3-220ENST00000496711 OR4C3Q8NH37 302 aa11.99□□□□□ -0.49
GARNL3-220ENST00000496711 C1orf216Q8TAB5 229 aa11.99□□□□□ -0.49
GARNL3-220ENST00000496711 NEIL3Q8TAT5 605 aa11.99□□□□□ -0.49
GARNL3-220ENST00000496711 OIT3Q8WWZ8 545 aa11.99□□□□□ -0.49
GARNL3-220ENST00000496711 AHCYL2Q96HN2 611 aaKnown RBP11.99□□□□□ -0.49
GARNL3-220ENST00000496711 HDHD5Q9BXW7 423 aa11.99□□□□□ -0.49
GARNL3-220ENST00000496711 ADGRL4Q9HBW9 690 aa11.99□□□□□ -0.49
GARNL3-220ENST00000496711 ICAM5Q9UMF0 924 aa11.99□□□□□ -0.49
GARNL3-220ENST00000496711 A0A087WUJ7 227 aa11.98□□□□□ -0.49
GARNL3-220ENST00000496711 CD8B2A6NJW9 211 aa11.98□□□□□ -0.49
GARNL3-220ENST00000496711 H3BMH7 237 aa11.98□□□□□ -0.49
GARNL3-220ENST00000496711 GNB5O14775 395 aa11.98□□□□□ -0.49
GARNL3-220ENST00000496711 POLR1CO15160 346 aaPredicted RBP11.98□□□□□ -0.49
GARNL3-220ENST00000496711 HYAL3O43820 417 aaPredicted RBP11.98□□□□□ -0.49
GARNL3-220ENST00000496711 REM1O75628 298 aa11.98□□□□□ -0.49
GARNL3-220ENST00000496711 RGS9O75916 674 aaPredicted RBP11.98□□□□□ -0.49
GARNL3-220ENST00000496711 MRPL3P09001 348 aaKnown RBP11.98□□□□□ -0.49
GARNL3-220ENST00000496711 SBK2P0C263 348 aa11.98□□□□□ -0.49
GARNL3-220ENST00000496711 CD8BP10966 210 aa11.98□□□□□ -0.49
GARNL3-220ENST00000496711 IL9P15248 144 aa11.98□□□□□ -0.49
GARNL3-220ENST00000496711 AZGP1P25311 298 aaKnown RBP11.98□□□□□ -0.49
GARNL3-220ENST00000496711 STARD6P59095 220 aa11.98□□□□□ -0.49
GARNL3-220ENST00000496711 ACTC1P68032 377 aa11.98□□□□□ -0.49
GARNL3-220ENST00000496711 ACTA1P68133 377 aa11.98□□□□□ -0.49
GARNL3-220ENST00000496711 POU4F2Q12837 409 aa11.98□□□□□ -0.49
GARNL3-220ENST00000496711 ZMAT1Q5H9K5 638 aa11.98□□□□□ -0.49
GARNL3-220ENST00000496711 DESI1Q6ICB0 168 aa11.98□□□□□ -0.49
GARNL3-220ENST00000496711 FAM131AQ6UXB0 335 aa11.98□□□□□ -0.49
GARNL3-220ENST00000496711 TTLL10Q6ZVT0 673 aa11.98□□□□□ -0.49
GARNL3-220ENST00000496711 CARFQ8N187 725 aa11.98□□□□□ -0.49
GARNL3-220ENST00000496711 CAMKK1Q8N5S9 505 aa11.98□□□□□ -0.49
GARNL3-220ENST00000496711 CYB561A3Q8NBI2 242 aa11.98□□□□□ -0.49
GARNL3-220ENST00000496711 FAM71CQ8NEG0 241 aa11.98□□□□□ -0.49
GARNL3-220ENST00000496711 SLC2A12Q8TD20 617 aa11.98□□□□□ -0.49
GARNL3-220ENST00000496711 EFHD2Q96C19 240 aaPredicted RBP11.98□□□□□ -0.49
GARNL3-220ENST00000496711 MVB12AQ96EY5 273 aa11.98□□□□□ -0.49
GARNL3-220ENST00000496711 OR1F2PQ96R84 312 aa11.98□□□□□ -0.49
GARNL3-220ENST00000496711 YIPF2Q9BWQ6 316 aa11.98□□□□□ -0.49
GARNL3-220ENST00000496711 BABAM2Q9NXR7 383 aa11.98□□□□□ -0.49
GARNL3-220ENST00000496711 HAO2Q9NYQ3 351 aa11.98□□□□□ -0.49
GARNL3-220ENST00000496711 CHRNA9Q9UGM1 479 aa11.98□□□□□ -0.49
GARNL3-220ENST00000496711 SERTAD3Q9UJW9 196 aa11.98□□□□□ -0.49
GARNL3-220ENST00000496711 TBC1D24Q9ULP9 559 aa11.98□□□□□ -0.49
GARNL3-220ENST00000496711 PPM1BO75688 479 aa11.97□□□□□ -0.49
GARNL3-220ENST00000496711 MT-ND5P03915 603 aa11.97□□□□□ -0.49
GARNL3-220ENST00000496711 ATXN8OSP0DMR3 200 aa11.97□□□□□ -0.49
GARNL3-220ENST00000496711 CLUP10909 449 aa11.97□□□□□ -0.49
GARNL3-220ENST00000496711 CSNK1EP49674 416 aaKnown RBP11.97□□□□□ -0.49
GARNL3-220ENST00000496711 ARL4DP49703 201 aa11.97□□□□□ -0.49
GARNL3-220ENST00000496711 SLC37A1P57057 533 aa11.97□□□□□ -0.49
GARNL3-220ENST00000496711 PPP3R1P63098 170 aa11.97□□□□□ -0.49
GARNL3-220ENST00000496711 HSD11B2P80365 405 aa11.97□□□□□ -0.49
GARNL3-220ENST00000496711 GLYR1Q49A26 553 aaPredicted RBP11.97□□□□□ -0.49
GARNL3-220ENST00000496711 KLHL26Q53HC5 615 aa11.97□□□□□ -0.49
GARNL3-220ENST00000496711 CCBE1Q6UXH8 406 aaPredicted RBP11.97□□□□□ -0.49
GARNL3-220ENST00000496711 MED25Q71SY5 747 aa11.97□□□□□ -0.49
GARNL3-220ENST00000496711 GDPD3Q7L5L3 318 aa11.97□□□□□ -0.49
GARNL3-220ENST00000496711 SLITRK4Q8IW52 837 aa11.97□□□□□ -0.49
GARNL3-220ENST00000496711 GPALPP1Q8IXQ4 340 aa11.97□□□□□ -0.49
GARNL3-220ENST00000496711 ZNF527Q8NB42 609 aa11.97□□□□□ -0.49
GARNL3-220ENST00000496711 ZSCAN1Q8NBB4 408 aa11.97□□□□□ -0.49
GARNL3-220ENST00000496711 PTPMT1Q8WUK0 201 aaPredicted RBP11.97□□□□□ -0.49
GARNL3-220ENST00000496711 C3orf49Q96BT1 292 aa11.97□□□□□ -0.49
GARNL3-220ENST00000496711 SENP5Q96HI0 755 aaPredicted RBP11.97□□□□□ -0.49
GARNL3-220ENST00000496711 DIRAS2Q96HU8 199 aa11.97□□□□□ -0.49
GARNL3-220ENST00000496711 SHDQ96IW2 340 aa11.97□□□□□ -0.49
GARNL3-220ENST00000496711 ART5Q96L15 291 aa11.97□□□□□ -0.49
GARNL3-220ENST00000496711 ERMAPQ96PL5 475 aaPredicted RBP11.97□□□□□ -0.49
GARNL3-220ENST00000496711 LMF1Q96S06 567 aa11.97□□□□□ -0.49
GARNL3-220ENST00000496711 TIMP4Q99727 224 aa11.97□□□□□ -0.49
GARNL3-220ENST00000496711 NDC1Q9BTX1 674 aa11.97□□□□□ -0.49
GARNL3-220ENST00000496711 HOXD1Q9GZZ0 328 aa11.97□□□□□ -0.49
GARNL3-220ENST00000496711 KCNN2Q9H2S1 579 aa11.97□□□□□ -0.49
GARNL3-220ENST00000496711 ENAMQ9NRM1 1142 aa11.97□□□□□ -0.49
GARNL3-220ENST00000496711 PNO1Q9NRX1 252 aaKnown RBP11.97□□□□□ -0.49
GARNL3-220ENST00000496711 KLHL21Q9UJP4 597 aa11.97□□□□□ -0.49
GARNL3-220ENST00000496711 IGHV1OR21-1A0A087WYE8 117 aa11.97□□□□□ -0.49
GARNL3-220ENST00000496711 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.97□□□□□ -0.49
GARNL3-220ENST00000496711 GTPBP1O00178 669 aaKnown RBP11.97□□□□□ -0.49
GARNL3-220ENST00000496711 DYRK3O43781 588 aa11.97□□□□□ -0.49
GARNL3-220ENST00000496711 DUX1O43812 170 aa11.97□□□□□ -0.49
GARNL3-220ENST00000496711 IL33O95760 270 aa11.97□□□□□ -0.49
GARNL3-220ENST00000496711 IL7P13232 177 aa11.97□□□□□ -0.49
GARNL3-220ENST00000496711 CFL1P23528 166 aaKnown RBP11.97□□□□□ -0.49
GARNL3-220ENST00000496711 CAPZA2P47755 286 aa11.97□□□□□ -0.49
GARNL3-220ENST00000496711 OR1D4P47884 311 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms