RNA–Protein interactions for RNA: ENST00000496375.1

CXCL12-208, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5

Gene CXCL12, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-208ENST00000496375 MAPK11Q15759 364 aa12.86□□□□□ -0.35
CXCL12-208ENST00000496375 ZSCAN26Q16670 478 aa12.86□□□□□ -0.35
CXCL12-208ENST00000496375 CTU2Q2VPK5 515 aaKnown RBP12.86□□□□□ -0.35
CXCL12-208ENST00000496375 TYW3Q6IPR3 259 aaKnown RBP12.86□□□□□ -0.35
CXCL12-208ENST00000496375 FRRS1Q6ZNA5 592 aa12.86□□□□□ -0.35
CXCL12-208ENST00000496375 C20orf204Q6ZNR8 217 aa12.86□□□□□ -0.35
CXCL12-208ENST00000496375 C16orf62Q7Z3J2 963 aa12.86□□□□□ -0.35
CXCL12-208ENST00000496375 PIGWQ7Z7B1 504 aa12.86□□□□□ -0.35
CXCL12-208ENST00000496375 OR6K3Q8NGY3 331 aa12.86□□□□□ -0.35
CXCL12-208ENST00000496375 OR2V1Q8NHB1 315 aa12.86□□□□□ -0.35
CXCL12-208ENST00000496375 RAB8BQ92930 207 aa12.86□□□□□ -0.35
CXCL12-208ENST00000496375 ZBTB8AQ96BR9 441 aa12.86□□□□□ -0.35
CXCL12-208ENST00000496375 AURKBQ96GD4 344 aaPredicted RBP12.86□□□□□ -0.35
CXCL12-208ENST00000496375 RNF145Q96MT1 663 aa12.86□□□□□ -0.35
CXCL12-208ENST00000496375 ELAC2Q9BQ52 826 aaKnown RBP12.86□□□□□ -0.35
CXCL12-208ENST00000496375 KLHDC3Q9BQ90 382 aa12.86□□□□□ -0.35
CXCL12-208ENST00000496375 MYLK2Q9H1R3 596 aa12.86□□□□□ -0.35
CXCL12-208ENST00000496375 TMEM185BQ9H7F4 350 aa12.86□□□□□ -0.35
CXCL12-208ENST00000496375 PLSCR4Q9NRQ2 329 aa12.86□□□□□ -0.35
CXCL12-208ENST00000496375 MED17Q9NVC6 651 aa12.86□□□□□ -0.35
CXCL12-208ENST00000496375 PAQR5Q9NXK6 330 aaPredicted RBP12.86□□□□□ -0.35
CXCL12-208ENST00000496375 RAI1Q7Z5J4 1906 aaPredicted RBP12.86□□□□□ -0.35
CXCL12-208ENST00000496375 C7orf72A4D263 438 aa12.85□□□□□ -0.35
CXCL12-208ENST00000496375 CLIC1O00299 241 aa12.85□□□□□ -0.35
CXCL12-208ENST00000496375 FBP2O00757 339 aa12.85□□□□□ -0.35
CXCL12-208ENST00000496375 SCDO00767 359 aa12.85□□□□□ -0.35
CXCL12-208ENST00000496375 TNFSF11O14788 317 aa12.85□□□□□ -0.35
CXCL12-208ENST00000496375 ANGPT2O15123 496 aa12.85□□□□□ -0.35
CXCL12-208ENST00000496375 FCMRO60667 390 aa12.85□□□□□ -0.35
CXCL12-208ENST00000496375 SS18L1O75177 396 aaPredicted RBP12.85□□□□□ -0.35
CXCL12-208ENST00000496375 NPPAP01160 153 aa12.85□□□□□ -0.35
CXCL12-208ENST00000496375 GPX2P18283 190 aa12.85□□□□□ -0.35
CXCL12-208ENST00000496375 PSMA4P25789 261 aaKnown RBP12.85□□□□□ -0.35
CXCL12-208ENST00000496375 RUNDC3AQ59EK9 446 aa12.85□□□□□ -0.35
CXCL12-208ENST00000496375 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.85□□□□□ -0.35
CXCL12-208ENST00000496375 PRAMEF8Q5VWM4 474 aa12.85□□□□□ -0.35
CXCL12-208ENST00000496375 PRAMEF7Q5VXH5 474 aa12.85□□□□□ -0.35
CXCL12-208ENST00000496375 STAC2Q6ZMT1 411 aa12.85□□□□□ -0.35
CXCL12-208ENST00000496375 LRRC74BQ6ZQY2 392 aa12.85□□□□□ -0.35
CXCL12-208ENST00000496375 YTHDF3Q7Z739 585 aaKnown RBP12.85□□□□□ -0.35
CXCL12-208ENST00000496375 ZNF527Q8NB42 609 aa12.85□□□□□ -0.35
CXCL12-208ENST00000496375 B4GALNT2Q8NHY0 566 aa12.85□□□□□ -0.35
CXCL12-208ENST00000496375 POC1BQ8TC44 478 aa12.85□□□□□ -0.35
CXCL12-208ENST00000496375 XAGE5Q8WWM1 108 aa12.85□□□□□ -0.35
CXCL12-208ENST00000496375 PERPQ96FX8 193 aa12.85□□□□□ -0.35
CXCL12-208ENST00000496375 Q96MF0 132 aa12.85□□□□□ -0.35
CXCL12-208ENST00000496375 CPPED1Q9BRF8 314 aaPredicted RBP12.85□□□□□ -0.35
CXCL12-208ENST00000496375 SLC38A1Q9H2H9 487 aa12.85□□□□□ -0.35
CXCL12-208ENST00000496375 KCNE5Q9UJ90 142 aa12.85□□□□□ -0.35
CXCL12-208ENST00000496375 CORO2BQ9UQ03 480 aa12.85□□□□□ -0.35
CXCL12-208ENST00000496375 WDR45Q9Y484 360 aa12.85□□□□□ -0.35
CXCL12-208ENST00000496375 DTNAQ9Y4J8 743 aa12.85□□□□□ -0.35
CXCL12-208ENST00000496375 CAPN7Q9Y6W3 813 aa12.85□□□□□ -0.35
CXCL12-208ENST00000496375 ROS1P08922 2347 aa12.85□□□□□ -0.35
CXCL12-208ENST00000496375 A0A0J9YW62 118 aa12.84□□□□□ -0.35
CXCL12-208ENST00000496375 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.84□□□□□ -0.35
CXCL12-208ENST00000496375 ERICH4A6NGS2 130 aa12.84□□□□□ -0.35
CXCL12-208ENST00000496375 H7C1Q1 480 aa12.84□□□□□ -0.35
CXCL12-208ENST00000496375 ADAMDEC1O15204 470 aa12.84□□□□□ -0.35
CXCL12-208ENST00000496375 DNAJA2O60884 412 aa12.84□□□□□ -0.35
CXCL12-208ENST00000496375 UGT2B17O75795 530 aa12.84□□□□□ -0.35
CXCL12-208ENST00000496375 HEXAP06865 529 aa12.84□□□□□ -0.35
CXCL12-208ENST00000496375 THBDP07204 575 aa12.84□□□□□ -0.35
CXCL12-208ENST00000496375 TFPTP0C1Z6 253 aa12.84□□□□□ -0.35
CXCL12-208ENST00000496375 ETFAP13804 333 aa12.84□□□□□ -0.35
CXCL12-208ENST00000496375 PPP3CBP16298 524 aa12.84□□□□□ -0.35
CXCL12-208ENST00000496375 IL11P20809 199 aa12.84□□□□□ -0.35
CXCL12-208ENST00000496375 RPS4Y1P22090 263 aaKnown RBP12.84□□□□□ -0.35
CXCL12-208ENST00000496375 ME2P23368 584 aa12.84□□□□□ -0.35
CXCL12-208ENST00000496375 CASP9P55211 416 aa12.84□□□□□ -0.35
CXCL12-208ENST00000496375 DSTNP60981 165 aa12.84□□□□□ -0.35
CXCL12-208ENST00000496375 CD226Q15762 336 aa12.84□□□□□ -0.35
CXCL12-208ENST00000496375 BEX5Q5H9J7 111 aa12.84□□□□□ -0.35
CXCL12-208ENST00000496375 HBMQ6B0K9 141 aa12.84□□□□□ -0.35
CXCL12-208ENST00000496375 ESPNLQ6ZVH7 1005 aa12.84□□□□□ -0.35
CXCL12-208ENST00000496375 CPLX4Q7Z7G2 160 aa12.84□□□□□ -0.35
CXCL12-208ENST00000496375 DHDDSQ86SQ9 333 aa12.84□□□□□ -0.35
CXCL12-208ENST00000496375 ZNF619Q8N2I2 560 aa12.84□□□□□ -0.35
CXCL12-208ENST00000496375 CIARTQ8N365 385 aaPredicted RBP12.84□□□□□ -0.35
CXCL12-208ENST00000496375 FAM71CQ8NEG0 241 aa12.84□□□□□ -0.35
CXCL12-208ENST00000496375 PNPT1Q8TCS8 783 aaKnown RBP12.84□□□□□ -0.35
CXCL12-208ENST00000496375 COX4I2Q96KJ9 171 aa12.84□□□□□ -0.35
CXCL12-208ENST00000496375 ANKRD27Q96NW4 1050 aa12.84□□□□□ -0.35
CXCL12-208ENST00000496375 CGREF1Q99674 301 aa12.84□□□□□ -0.35
CXCL12-208ENST00000496375 CCDC106Q9BWC9 280 aa12.84□□□□□ -0.35
CXCL12-208ENST00000496375 IKZF5Q9H5V7 419 aa12.84□□□□□ -0.35
CXCL12-208ENST00000496375 A4GALTQ9NPC4 353 aa12.84□□□□□ -0.35
CXCL12-208ENST00000496375 GLRX2Q9NS18 164 aa12.84□□□□□ -0.35
CXCL12-208ENST00000496375 CALML5Q9NZT1 146 aa12.84□□□□□ -0.35
CXCL12-208ENST00000496375 P2RX2Q9UBL9 471 aa12.84□□□□□ -0.35
CXCL12-208ENST00000496375 ABCA2Q9BZC7 2435 aa12.84□□□□□ -0.35
CXCL12-208ENST00000496375 FAM171A2A8MVW0 826 aa12.83□□□□□ -0.36
CXCL12-208ENST00000496375 FXYD1O00168 92 aa12.83□□□□□ -0.36
CXCL12-208ENST00000496375 KLF4O43474 513 aa12.83□□□□□ -0.36
CXCL12-208ENST00000496375 H6PDO95479 791 aa12.83□□□□□ -0.36
CXCL12-208ENST00000496375 CHRM4P08173 479 aa12.83□□□□□ -0.36
CXCL12-208ENST00000496375 LINGO3P0C6S8 592 aa12.83□□□□□ -0.36
CXCL12-208ENST00000496375 CRATP43155 626 aa12.83□□□□□ -0.36
CXCL12-208ENST00000496375 SUMO3P55854 103 aaPredicted RBP12.83□□□□□ -0.36
CXCL12-208ENST00000496375 SF3A3Q12874 501 aaKnown RBP eCLIP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms