RNA–Protein interactions for RNA: ENST00000496081.5

HLA-A-208, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,786 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-208ENST00000496081 OR11G2Q8NGC1 345 aa14.96□□□□□ -0.02
HLA-A-208ENST00000496081 OR13F1Q8NGS4 319 aa14.96□□□□□ -0.02
HLA-A-208ENST00000496081 ZNF563Q8TA94 476 aa14.96□□□□□ -0.02
HLA-A-208ENST00000496081 FANK1Q8TC84 345 aa14.96□□□□□ -0.02
HLA-A-208ENST00000496081 FAR1Q8WVX9 515 aa14.96□□□□□ -0.02
HLA-A-208ENST00000496081 MYDGFQ969H8 173 aa14.96□□□□□ -0.02
HLA-A-208ENST00000496081 CCNL2Q96S94 520 aaPredicted RBP14.96□□□□□ -0.02
HLA-A-208ENST00000496081 LHPPQ9H008 270 aa14.96□□□□□ -0.02
HLA-A-208ENST00000496081 ENKD1Q9H0I2 346 aa14.96□□□□□ -0.02
HLA-A-208ENST00000496081 UBQLN3Q9H347 655 aa14.96□□□□□ -0.02
HLA-A-208ENST00000496081 HHATLQ9HCP6 504 aa14.96□□□□□ -0.02
HLA-A-208ENST00000496081 TCFL5Q9UL49 500 aa14.96□□□□□ -0.02
HLA-A-208ENST00000496081 SDK2Q58EX2 2172 aa14.95□□□□□ -0.02
HLA-A-208ENST00000496081 IGKV1D-42A0A075B6H8 117 aa14.95□□□□□ -0.02
HLA-A-208ENST00000496081 SOCS6O14544 535 aa14.95□□□□□ -0.02
HLA-A-208ENST00000496081 PTP4A3O75365 173 aa14.95□□□□□ -0.02
HLA-A-208ENST00000496081 OR2J2O76002 312 aa14.95□□□□□ -0.02
HLA-A-208ENST00000496081 SEC14L2O76054 403 aa14.95□□□□□ -0.02
HLA-A-208ENST00000496081 CH25HO95992 272 aa14.95□□□□□ -0.02
HLA-A-208ENST00000496081 CDK1P06493 297 aa14.95□□□□□ -0.02
HLA-A-208ENST00000496081 CELA2AP08217 269 aa14.95□□□□□ -0.02
HLA-A-208ENST00000496081 RAB40ALP0C0E4 278 aa14.95□□□□□ -0.02
HLA-A-208ENST00000496081 PNMTP11086 282 aa14.95□□□□□ -0.02
HLA-A-208ENST00000496081 SLC1A3P43003 542 aa14.95□□□□□ -0.02
HLA-A-208ENST00000496081 SLC15A1P46059 708 aa14.95□□□□□ -0.02
HLA-A-208ENST00000496081 TOMM34Q15785 309 aaPredicted RBP14.95□□□□□ -0.02
HLA-A-208ENST00000496081 EXT1Q16394 746 aa14.95□□□□□ -0.02
HLA-A-208ENST00000496081 PGGHGQ32M88 737 aa14.95□□□□□ -0.02
HLA-A-208ENST00000496081 SYT14P1Q58G82 188 aa14.95□□□□□ -0.02
HLA-A-208ENST00000496081 C3orf38Q5JPI3 329 aa14.95□□□□□ -0.02
HLA-A-208ENST00000496081 PLAG1Q6DJT9 500 aa14.95□□□□□ -0.02
HLA-A-208ENST00000496081 OR5W2Q8NH69 310 aa14.95□□□□□ -0.02
HLA-A-208ENST00000496081 TMEM163Q8TC26 289 aa14.95□□□□□ -0.02
HLA-A-208ENST00000496081 DUSP19Q8WTR2 217 aa14.95□□□□□ -0.02
HLA-A-208ENST00000496081 MUL1Q969V5 352 aa14.95□□□□□ -0.02
HLA-A-208ENST00000496081 TMCO6Q96DC7 493 aa14.95□□□□□ -0.02
HLA-A-208ENST00000496081 SLC38A2Q96QD8 506 aa14.95□□□□□ -0.02
HLA-A-208ENST00000496081 ADAM19Q9H013 955 aa14.95□□□□□ -0.02
HLA-A-208ENST00000496081 PCNX3Q9H6A9 2034 aa14.94□□□□□ -0.02
HLA-A-208ENST00000496081 KNTC1P50748 2209 aa14.94□□□□□ -0.02
HLA-A-208ENST00000496081 TRAV27A0A087WT01 109 aa14.94□□□□□ -0.02
HLA-A-208ENST00000496081 A0A1W2PQ72 361 aa14.94□□□□□ -0.02
HLA-A-208ENST00000496081 ELOA3DA6NLF2 546 aaPredicted RBP14.94□□□□□ -0.02
HLA-A-208ENST00000496081 SURF4O15260 269 aa14.94□□□□□ -0.02
HLA-A-208ENST00000496081 INMTO95050 263 aa14.94□□□□□ -0.02
HLA-A-208ENST00000496081 RCBTB2O95199 551 aa14.94□□□□□ -0.02
HLA-A-208ENST00000496081 FADS2O95864 444 aaKnown RBP14.94□□□□□ -0.02
HLA-A-208ENST00000496081 IGHEP01854 428 aa14.94□□□□□ -0.02
HLA-A-208ENST00000496081 STSP08842 583 aa14.94□□□□□ -0.02
HLA-A-208ENST00000496081 BMP7P18075 431 aa14.94□□□□□ -0.02
HLA-A-208ENST00000496081 ITPKBP27987 946 aa14.94□□□□□ -0.02
HLA-A-208ENST00000496081 P2RX1P51575 399 aa14.94□□□□□ -0.02
HLA-A-208ENST00000496081 MLLT10P55197 1068 aa14.94□□□□□ -0.02
HLA-A-208ENST00000496081 ST3GAL4Q11206 333 aa14.94□□□□□ -0.02
HLA-A-208ENST00000496081 FHL1Q13642 323 aa14.94□□□□□ -0.02
HLA-A-208ENST00000496081 ELOA3BQ3SY89 546 aa14.94□□□□□ -0.02
HLA-A-208ENST00000496081 TMEM164Q5U3C3 297 aa14.94□□□□□ -0.02
HLA-A-208ENST00000496081 RPL13AP3Q6NVV1 102 aa14.94□□□□□ -0.02
HLA-A-208ENST00000496081 SMARCD3Q6STE5 483 aa14.94□□□□□ -0.02
HLA-A-208ENST00000496081 NUP54Q7Z3B4 507 aa14.94□□□□□ -0.02
HLA-A-208ENST00000496081 SVOPQ8N4V2 548 aa14.94□□□□□ -0.02
HLA-A-208ENST00000496081 DEFB124Q8NES8 71 aa14.94□□□□□ -0.02
HLA-A-208ENST00000496081 ELOA3Q8NG57 546 aa14.94□□□□□ -0.02
HLA-A-208ENST00000496081 OR51A7Q8NH64 312 aa14.94□□□□□ -0.02
HLA-A-208ENST00000496081 M1APQ8TC57 530 aa14.94□□□□□ -0.02
HLA-A-208ENST00000496081 RNF138Q8WVD3 245 aa14.94□□□□□ -0.02
HLA-A-208ENST00000496081 LRR1Q96L50 414 aa14.94□□□□□ -0.02
HLA-A-208ENST00000496081 PRRG3Q9BZD7 231 aa14.94□□□□□ -0.02
HLA-A-208ENST00000496081 SLC19A3Q9BZV2 496 aa14.94□□□□□ -0.02
HLA-A-208ENST00000496081 ACOT13Q9NPJ3 140 aa14.94□□□□□ -0.02
HLA-A-208ENST00000496081 CNOT2Q9NZN8 540 aaKnown RBP14.94□□□□□ -0.02
HLA-A-208ENST00000496081 GPR52Q9Y2T5 361 aa14.94□□□□□ -0.02
HLA-A-208ENST00000496081 EFCAB10A6NFE3 127 aa14.93□□□□□ -0.02
HLA-A-208ENST00000496081 BHLHE40O14503 412 aa14.93□□□□□ -0.02
HLA-A-208ENST00000496081 HCN1O60741 890 aa14.93□□□□□ -0.02
HLA-A-208ENST00000496081 PGCP20142 388 aa14.93□□□□□ -0.02
HLA-A-208ENST00000496081 TACR3P29371 465 aa14.93□□□□□ -0.02
HLA-A-208ENST00000496081 GP2P55259 537 aaKnown RBP14.93□□□□□ -0.02
HLA-A-208ENST00000496081 TUBA3CQ13748 450 aa14.93□□□□□ -0.02
HLA-A-208ENST00000496081 MEDAGQ5VYS4 303 aa14.93□□□□□ -0.02
HLA-A-208ENST00000496081 THSD4Q6ZMP0 1018 aa14.93□□□□□ -0.02
HLA-A-208ENST00000496081 CCDC81Q6ZN84 652 aa14.93□□□□□ -0.02
HLA-A-208ENST00000496081 NDUFAF7Q7L592 441 aa14.93□□□□□ -0.02
HLA-A-208ENST00000496081 OAFQ86UD1 273 aa14.93□□□□□ -0.02
HLA-A-208ENST00000496081 CLVS1Q8IUQ0 354 aaPredicted RBP14.93□□□□□ -0.02
HLA-A-208ENST00000496081 MISPQ8IVT2 679 aa14.93□□□□□ -0.02
HLA-A-208ENST00000496081 OR52L1Q8NGH7 329 aa14.93□□□□□ -0.02
HLA-A-208ENST00000496081 SLC22A8Q8TCC7 542 aa14.93□□□□□ -0.02
HLA-A-208ENST00000496081 TTC9Q92623 222 aa14.93□□□□□ -0.02
HLA-A-208ENST00000496081 SGTBQ96EQ0 304 aa14.93□□□□□ -0.02
HLA-A-208ENST00000496081 ZNF582Q96NG8 517 aaPredicted RBP14.93□□□□□ -0.02
HLA-A-208ENST00000496081 TNFRSF13CQ96RJ3 184 aa14.93□□□□□ -0.02
HLA-A-208ENST00000496081 RASL10BQ96S79 203 aa14.93□□□□□ -0.02
HLA-A-208ENST00000496081 TEX12Q9BXU0 123 aa14.93□□□□□ -0.02
HLA-A-208ENST00000496081 YIPF3Q9GZM5 350 aa14.93□□□□□ -0.02
HLA-A-208ENST00000496081 MMP25Q9NPA2 562 aa14.93□□□□□ -0.02
HLA-A-208ENST00000496081 RSL24D1Q9UHA3 163 aaKnown RBP14.93□□□□□ -0.02
HLA-A-208ENST00000496081 FARSAQ9Y285 508 aaKnown RBP14.93□□□□□ -0.02
HLA-A-208ENST00000496081 NSG1A0A0A6YYJ2 146 aa14.93□□□□□ -0.02
HLA-A-208ENST00000496081 ZNF99A8MXY4 864 aaPredicted RBP14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms