RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 PGCP20142 388 aa6.37□□□□□ -1.39
USP39-219ENST00000496047 S1PR1P21453 382 aa6.37□□□□□ -1.39
USP39-219ENST00000496047 GADD45AP24522 165 aa6.37□□□□□ -1.39
USP39-219ENST00000496047 ACVR2AP27037 513 aa6.37□□□□□ -1.39
USP39-219ENST00000496047 HTR2AP28223 471 aa6.37□□□□□ -1.39
USP39-219ENST00000496047 HTR1FP30939 366 aa6.37□□□□□ -1.39
USP39-219ENST00000496047 CSF2RBP32927 897 aa6.37□□□□□ -1.39
USP39-219ENST00000496047 LIPAP38571 399 aa6.37□□□□□ -1.39
USP39-219ENST00000496047 ADH7P40394 386 aa6.37□□□□□ -1.39
USP39-219ENST00000496047 OR1D4P47884 311 aa6.37□□□□□ -1.39
USP39-219ENST00000496047 TMED10P49755 219 aaKnown RBP6.37□□□□□ -1.39
USP39-219ENST00000496047 ENTPD1P49961 510 aa6.37□□□□□ -1.39
USP39-219ENST00000496047 SLC37A1P57057 533 aa6.37□□□□□ -1.39
USP39-219ENST00000496047 PRPS1P60891 318 aa6.37□□□□□ -1.39
USP39-219ENST00000496047 BTG2P78543 158 aa6.37□□□□□ -1.39
USP39-219ENST00000496047 ZXDAP98168 799 aa6.37□□□□□ -1.39
USP39-219ENST00000496047 HOXC5Q00444 222 aa6.37□□□□□ -1.39
USP39-219ENST00000496047 CRYZQ08257 329 aaKnown RBP6.37□□□□□ -1.39
USP39-219ENST00000496047 SIGLEC14Q08ET2 396 aa6.37□□□□□ -1.39
USP39-219ENST00000496047 PLCXD2Q0VAA5 305 aa6.37□□□□□ -1.39
USP39-219ENST00000496047 SQSTM1Q13501 440 aa6.37□□□□□ -1.39
USP39-219ENST00000496047 AQP6Q13520 282 aa6.37□□□□□ -1.39
USP39-219ENST00000496047 KRR1Q13601 381 aaKnown RBP6.37□□□□□ -1.39
USP39-219ENST00000496047 EFR3AQ14156 821 aa6.37□□□□□ -1.39
USP39-219ENST00000496047 ERV3-1Q14264 604 aa6.37□□□□□ -1.39
USP39-219ENST00000496047 KCNAB1Q14722 419 aa6.37□□□□□ -1.39
USP39-219ENST00000496047 TRAM1Q15629 374 aa6.37□□□□□ -1.39
USP39-219ENST00000496047 NSDHLQ15738 373 aa6.37□□□□□ -1.39
USP39-219ENST00000496047 NNATQ16517 81 aa6.37□□□□□ -1.39
USP39-219ENST00000496047 MAPK14Q16539 360 aa6.37□□□□□ -1.39
USP39-219ENST00000496047 RGS21Q2M5E4 152 aa6.37□□□□□ -1.39
USP39-219ENST00000496047 RHBDD2Q6NTF9 364 aa6.37□□□□□ -1.39
USP39-219ENST00000496047 ACSM5Q6NUN0 579 aa6.37□□□□□ -1.39
USP39-219ENST00000496047 NPSR1Q6W5P4 371 aa6.37□□□□□ -1.39
USP39-219ENST00000496047 HSDL2Q6YN16 418 aa6.37□□□□□ -1.39
USP39-219ENST00000496047 RTL4Q6ZR62 310 aa6.37□□□□□ -1.39
USP39-219ENST00000496047 ARHGAP22Q7Z5H3 698 aa6.37□□□□□ -1.39
USP39-219ENST00000496047 OAFQ86UD1 273 aa6.37□□□□□ -1.39
USP39-219ENST00000496047 KIF18BQ86Y91 864 aa6.37□□□□□ -1.39
USP39-219ENST00000496047 MISPQ8IVT2 679 aa6.37□□□□□ -1.39
USP39-219ENST00000496047 ZNF615Q8N8J6 731 aa6.37□□□□□ -1.39
USP39-219ENST00000496047 FAM181AQ8N9Y4 354 aa6.37□□□□□ -1.39
USP39-219ENST00000496047 RCBTB1Q8NDN9 531 aa6.37□□□□□ -1.39
USP39-219ENST00000496047 C17orf47Q8NEP4 570 aa6.37□□□□□ -1.39
USP39-219ENST00000496047 PRSS33Q8NF86 280 aa6.37□□□□□ -1.39
USP39-219ENST00000496047 OR4D9Q8NGE8 314 aa6.37□□□□□ -1.39
USP39-219ENST00000496047 OR52I1Q8NGK6 324 aa6.37□□□□□ -1.39
USP39-219ENST00000496047 OR1L3Q8NH93 324 aa6.37□□□□□ -1.39
USP39-219ENST00000496047 NDNFQ8TB73 568 aa6.37□□□□□ -1.39
USP39-219ENST00000496047 PHOSPHO1Q8TCT1 267 aa6.37□□□□□ -1.39
USP39-219ENST00000496047 DYNC2LI1Q8TCX1 351 aa6.37□□□□□ -1.39
USP39-219ENST00000496047 DOK4Q8TEW6 326 aa6.37□□□□□ -1.39
USP39-219ENST00000496047 AP3S1Q92572 193 aa6.37□□□□□ -1.39
USP39-219ENST00000496047 PIGKQ92643 395 aa6.37□□□□□ -1.39
USP39-219ENST00000496047 ZNF501Q96CX3 271 aaPredicted RBP6.37□□□□□ -1.39
USP39-219ENST00000496047 ZG16BQ96DA0 208 aa6.37□□□□□ -1.39
USP39-219ENST00000496047 SENP5Q96HI0 755 aaPredicted RBP6.37□□□□□ -1.39
USP39-219ENST00000496047 SAMD8Q96LT4 415 aa6.37□□□□□ -1.39
USP39-219ENST00000496047 PRSS27Q9BQR3 290 aa6.37□□□□□ -1.39
USP39-219ENST00000496047 WFDC6Q9BQY6 131 aa6.37□□□□□ -1.39
USP39-219ENST00000496047 CHCHD6Q9BRQ6 235 aa6.37□□□□□ -1.39
USP39-219ENST00000496047 TBL1XR1Q9BZK7 514 aa6.37□□□□□ -1.39
USP39-219ENST00000496047 PLA2G12AQ9BZM1 189 aa6.37□□□□□ -1.39
USP39-219ENST00000496047 C12orf10Q9HB07 376 aa6.37□□□□□ -1.39
USP39-219ENST00000496047 LANCL2Q9NS86 450 aa6.37□□□□□ -1.39
USP39-219ENST00000496047 AKAP7Q9P0M2 348 aaPredicted RBP6.37□□□□□ -1.39
USP39-219ENST00000496047 DHCR7Q9UBM7 475 aaKnown RBP6.37□□□□□ -1.39
USP39-219ENST00000496047 TNFRSF10DQ9UBN6 386 aa6.37□□□□□ -1.39
USP39-219ENST00000496047 GPN3Q9UHW5 284 aaPredicted RBP6.37□□□□□ -1.39
USP39-219ENST00000496047 ZNF337Q9Y3M9 751 aa6.37□□□□□ -1.39
USP39-219ENST00000496047 CHST2Q9Y4C5 530 aa6.37□□□□□ -1.39
USP39-219ENST00000496047 PCNX3Q9H6A9 2034 aa6.37□□□□□ -1.39
USP39-219ENST00000496047 MAST4O15021 2626 aa6.36□□□□□ -1.39
USP39-219ENST00000496047 FLNBO75369 2602 aaKnown RBP6.36□□□□□ -1.39
USP39-219ENST00000496047 IGKV3D-11A0A0A0MRZ8 115 aa6.36□□□□□ -1.39
USP39-219ENST00000496047 A0A1W2PQD3 144 aa6.36□□□□□ -1.39
USP39-219ENST00000496047 CDC14CA4D256 554 aa6.36□□□□□ -1.39
USP39-219ENST00000496047 A8MUA0 341 aa6.36□□□□□ -1.39
USP39-219ENST00000496047 PROB1E7EW31 1015 aa6.36□□□□□ -1.39
USP39-219ENST00000496047 M0R082 166 aa6.36□□□□□ -1.39
USP39-219ENST00000496047 TAF4O00268 1085 aa6.36□□□□□ -1.39
USP39-219ENST00000496047 IDH3BO43837 385 aa6.36□□□□□ -1.39
USP39-219ENST00000496047 CDC40O60508 579 aaKnown RBP eCLIP6.36□□□□□ -1.39
USP39-219ENST00000496047 EIF4E2O60573 245 aaKnown RBP6.36□□□□□ -1.39
USP39-219ENST00000496047 SCRG1O75711 98 aa6.36□□□□□ -1.39
USP39-219ENST00000496047 UTS2O95399 124 aa6.36□□□□□ -1.39
USP39-219ENST00000496047 CH25HO95992 272 aa6.36□□□□□ -1.39
USP39-219ENST00000496047 HIST1H2ABP04908 130 aa6.36□□□□□ -1.39
USP39-219ENST00000496047 IGFBP1P08833 259 aaPredicted RBP6.36□□□□□ -1.39
USP39-219ENST00000496047 CT45A8P0DMV1 189 aa6.36□□□□□ -1.39
USP39-219ENST00000496047 CT45A9P0DMV2 189 aa6.36□□□□□ -1.39
USP39-219ENST00000496047 CPEP16870 476 aa6.36□□□□□ -1.39
USP39-219ENST00000496047 CD40LGP29965 261 aa6.36□□□□□ -1.39
USP39-219ENST00000496047 RPL4P36578 427 aaKnown RBP6.36□□□□□ -1.39
USP39-219ENST00000496047 SLC16A1P53985 500 aa6.36□□□□□ -1.39
USP39-219ENST00000496047 PNLIPRP2P54317 469 aa6.36□□□□□ -1.39
USP39-219ENST00000496047 NCS1P62166 190 aa6.36□□□□□ -1.39
USP39-219ENST00000496047 SNRPNP63162 240 aaKnown RBP6.36□□□□□ -1.39
USP39-219ENST00000496047 BDH1Q02338 343 aa6.36□□□□□ -1.39
USP39-219ENST00000496047 CSTF1Q05048 431 aaKnown RBP6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms