RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 CCDC32Q9BV29 185 aa12.46□□□□□ -0.41
GPC1-209ENST00000495100 TSPAN10Q9H1Z9 355 aaPredicted RBP12.46□□□□□ -0.41
GPC1-209ENST00000495100 TMEM185BQ9H7F4 350 aa12.46□□□□□ -0.41
GPC1-209ENST00000495100 TTC28Q96AY4 2481 aa12.46□□□□□ -0.41
GPC1-209ENST00000495100 DNAJC13O75165 2243 aa12.46□□□□□ -0.41
GPC1-209ENST00000495100 A0A1B0GWA3 101 aa12.46□□□□□ -0.41
GPC1-209ENST00000495100 CASC3O15234 703 aaKnown RBP12.46□□□□□ -0.41
GPC1-209ENST00000495100 PROS1P07225 676 aa12.46□□□□□ -0.41
GPC1-209ENST00000495100 EMDP50402 254 aa12.46□□□□□ -0.41
GPC1-209ENST00000495100 DGCR2P98153 550 aa12.46□□□□□ -0.41
GPC1-209ENST00000495100 IFITM2Q01629 132 aa12.46□□□□□ -0.41
GPC1-209ENST00000495100 TMEM35AQ53FP2 167 aa12.46□□□□□ -0.41
GPC1-209ENST00000495100 C1orf94Q6P1W5 598 aa12.46□□□□□ -0.41
GPC1-209ENST00000495100 WDR88Q6ZMY6 472 aa12.46□□□□□ -0.41
GPC1-209ENST00000495100 UBE2Q1Q7Z7E8 422 aa12.46□□□□□ -0.41
GPC1-209ENST00000495100 REM2Q8IYK8 340 aaPredicted RBP12.46□□□□□ -0.41
GPC1-209ENST00000495100 ZNF655Q8N720 491 aaPredicted RBP12.46□□□□□ -0.41
GPC1-209ENST00000495100 OR2L8Q8NGY9 312 aa12.46□□□□□ -0.41
GPC1-209ENST00000495100 LMX1AQ8TE12 382 aa12.46□□□□□ -0.41
GPC1-209ENST00000495100 SLC7A6Q92536 515 aa12.46□□□□□ -0.41
GPC1-209ENST00000495100 RAB7BQ96AH8 199 aa12.46□□□□□ -0.41
GPC1-209ENST00000495100 BCL7BQ9BQE9 202 aa12.46□□□□□ -0.41
GPC1-209ENST00000495100 MGAT4AQ9UM21 535 aa12.46□□□□□ -0.41
GPC1-209ENST00000495100 PLXNA4Q9HCM2 1894 aa12.46□□□□□ -0.41
GPC1-209ENST00000495100 NBASA2RRP1 2371 aa12.46□□□□□ -0.42
GPC1-209ENST00000495100 WDFY4Q6ZS81 3184 aa12.46□□□□□ -0.42
GPC1-209ENST00000495100 A0A087WV48 116 aa12.46□□□□□ -0.42
GPC1-209ENST00000495100 I3L521 148 aa12.46□□□□□ -0.42
GPC1-209ENST00000495100 HCRTR2O43614 444 aa12.46□□□□□ -0.42
GPC1-209ENST00000495100 RCBTB2O95199 551 aa12.46□□□□□ -0.42
GPC1-209ENST00000495100 ST6GAL1P15907 406 aa12.46□□□□□ -0.42
GPC1-209ENST00000495100 PKLRP30613 574 aa12.46□□□□□ -0.42
GPC1-209ENST00000495100 HMGA2P52926 109 aa12.46□□□□□ -0.42
GPC1-209ENST00000495100 DPTQ07507 201 aa12.46□□□□□ -0.42
GPC1-209ENST00000495100 DEFB133Q30KQ1 61 aa12.46□□□□□ -0.42
GPC1-209ENST00000495100 LEG1Q6P5S2 330 aa12.46□□□□□ -0.42
GPC1-209ENST00000495100 ZNF322Q6U7Q0 402 aaPredicted RBP12.46□□□□□ -0.42
GPC1-209ENST00000495100 ADAMTSL4Q6UY14 1074 aa12.46□□□□□ -0.42
GPC1-209ENST00000495100 TMED4Q7Z7H5 227 aa12.46□□□□□ -0.42
GPC1-209ENST00000495100 CDH24Q86UP0 819 aa12.46□□□□□ -0.42
GPC1-209ENST00000495100 JAZF1Q86VZ6 243 aa12.46□□□□□ -0.42
GPC1-209ENST00000495100 MORN4Q8NDC4 146 aa12.46□□□□□ -0.42
GPC1-209ENST00000495100 METTL2AQ96IZ6 378 aaKnown RBP12.46□□□□□ -0.42
GPC1-209ENST00000495100 FCRL1Q96LA6 429 aa12.46□□□□□ -0.42
GPC1-209ENST00000495100 HHIPQ96QV1 700 aa12.46□□□□□ -0.42
GPC1-209ENST00000495100 AUNIPQ9H7T9 357 aa12.46□□□□□ -0.42
GPC1-209ENST00000495100 ZNF224Q9NZL3 707 aa12.46□□□□□ -0.42
GPC1-209ENST00000495100 FKBP7Q9Y680 259 aa12.46□□□□□ -0.42
GPC1-209ENST00000495100 CDH10Q9Y6N8 788 aa12.46□□□□□ -0.42
GPC1-209ENST00000495100 POLEQ07864 2286 aa12.45□□□□□ -0.42
GPC1-209ENST00000495100 IFNGP01579 166 aa12.45□□□□□ -0.42
GPC1-209ENST00000495100 AQP2P41181 271 aa12.45□□□□□ -0.42
GPC1-209ENST00000495100 PPP3R1P63098 170 aa12.45□□□□□ -0.42
GPC1-209ENST00000495100 ARHGAP19Q14CB8 494 aa12.45□□□□□ -0.42
GPC1-209ENST00000495100 ZNF620Q6ZNG0 422 aa12.45□□□□□ -0.42
GPC1-209ENST00000495100 ZNF765Q7L2R6 523 aa12.45□□□□□ -0.42
GPC1-209ENST00000495100 TMPRSS12Q86WS5 348 aa12.45□□□□□ -0.42
GPC1-209ENST00000495100 CEP76Q8TAP6 659 aa12.45□□□□□ -0.42
GPC1-209ENST00000495100 SLC37A2Q8TED4 501 aa12.45□□□□□ -0.42
GPC1-209ENST00000495100 TRIM2Q9C040 744 aa12.45□□□□□ -0.42
GPC1-209ENST00000495100 FAM60AQ9NP50 221 aa12.45□□□□□ -0.42
GPC1-209ENST00000495100 CENPMQ9NSP4 180 aa12.45□□□□□ -0.42
GPC1-209ENST00000495100 ACOXLQ9NUZ1 547 aa12.45□□□□□ -0.42
GPC1-209ENST00000495100 ZNF69Q9UC07 566 aa12.45□□□□□ -0.42
GPC1-209ENST00000495100 LIPT1Q9Y234 373 aa12.45□□□□□ -0.42
GPC1-209ENST00000495100 TMEM72A0PK05 275 aa12.45□□□□□ -0.42
GPC1-209ENST00000495100 PLA2G10O15496 165 aa12.45□□□□□ -0.42
GPC1-209ENST00000495100 RNF13O43567 381 aa12.45□□□□□ -0.42
GPC1-209ENST00000495100 ZIC2O95409 532 aaPredicted RBP12.45□□□□□ -0.42
GPC1-209ENST00000495100 SNTB2Q13425 540 aaKnown RBP12.45□□□□□ -0.42
GPC1-209ENST00000495100 HLA-DQA1Q5Y7H0 255 aa12.45□□□□□ -0.42
GPC1-209ENST00000495100 C12orf73Q69YU5 71 aa12.45□□□□□ -0.42
GPC1-209ENST00000495100 Q6ZS52 159 aa12.45□□□□□ -0.42
GPC1-209ENST00000495100 SSX6Q7RTT6 188 aa12.45□□□□□ -0.42
GPC1-209ENST00000495100 MEIOBQ8N635 442 aa12.45□□□□□ -0.42
GPC1-209ENST00000495100 CCDC120Q96HB5 630 aa12.45□□□□□ -0.42
GPC1-209ENST00000495100 TEAD3Q99594 435 aa12.45□□□□□ -0.42
GPC1-209ENST00000495100 EPHX3Q9H6B9 360 aa12.45□□□□□ -0.42
GPC1-209ENST00000495100 SLC25A19Q9HC21 320 aa12.45□□□□□ -0.42
GPC1-209ENST00000495100 CPNE7Q9UBL6 633 aa12.45□□□□□ -0.42
GPC1-209ENST00000495100 MPDZO75970 2070 aa12.45□□□□□ -0.42
GPC1-209ENST00000495100 ICE1Q9Y2F5 2266 aa12.45□□□□□ -0.42
GPC1-209ENST00000495100 APBB3O95704 486 aa12.45□□□□□ -0.42
GPC1-209ENST00000495100 ADH1BP00325 375 aa12.45□□□□□ -0.42
GPC1-209ENST00000495100 IL1AP01583 271 aa12.45□□□□□ -0.42
GPC1-209ENST00000495100 RAB3BP20337 219 aa12.45□□□□□ -0.42
GPC1-209ENST00000495100 GABRA5P31644 462 aa12.45□□□□□ -0.42
GPC1-209ENST00000495100 TMEM52BQ4KMG9 183 aa12.45□□□□□ -0.42
GPC1-209ENST00000495100 C16orf47Q6ZP98 133 aaPredicted RBP12.45□□□□□ -0.42
GPC1-209ENST00000495100 DGAT2L6Q6ZPD8 337 aa12.45□□□□□ -0.42
GPC1-209ENST00000495100 THAP4Q8WY91 577 aa12.45□□□□□ -0.42
GPC1-209ENST00000495100 ITPKCQ96DU7 683 aa12.45□□□□□ -0.42
GPC1-209ENST00000495100 NARS2Q96I59 477 aaKnown RBP12.45□□□□□ -0.42
GPC1-209ENST00000495100 Q96M85 177 aa12.45□□□□□ -0.42
GPC1-209ENST00000495100 ASB6Q9NWX5 421 aa12.45□□□□□ -0.42
GPC1-209ENST00000495100 DAPP1Q9UN19 280 aa12.45□□□□□ -0.42
GPC1-209ENST00000495100 ROS1P08922 2347 aa12.44□□□□□ -0.42
GPC1-209ENST00000495100 TEX13CA0A0J9YWL9 993 aa12.44□□□□□ -0.42
GPC1-209ENST00000495100 ANKRD34BA5PLL1 514 aa12.44□□□□□ -0.42
GPC1-209ENST00000495100 SURF4O15260 269 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms