RNA–Protein interactions for RNA: ENST00000495071.6

SUPT20H-222, Transcript of SPT20 homolog, SAGA complex component, human

TSL 5

Gene SUPT20H, Length 3,669 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUPT20H-222	ENST00000495071	MRPL39	Q9NYK5	338 aa	Known RBP	12.42	□□□□□ -0.42
SUPT20H-222	ENST00000495071	OR6C2	Q9NZP2	312 aa		12.42	□□□□□ -0.42
SUPT20H-222	ENST00000495071	ZMIZ1	Q9ULJ6	1067 aa		12.42	□□□□□ -0.42
SUPT20H-222	ENST00000495071	SNRNP200	O75643	2136 aa	Known RBP	12.42	□□□□□ -0.42
SUPT20H-222	ENST00000495071	PRICKLE3	O43900	615 aa	Predicted RBP	12.42	□□□□□ -0.42
SUPT20H-222	ENST00000495071	EDNRA	P25101	427 aa		12.42	□□□□□ -0.42
SUPT20H-222	ENST00000495071	SLC6A6	P31641	620 aa		12.42	□□□□□ -0.42
SUPT20H-222	ENST00000495071	ZNF85	Q03923	595 aa		12.42	□□□□□ -0.42
SUPT20H-222	ENST00000495071	CRYZ	Q08257	329 aa	Known RBP	12.42	□□□□□ -0.42
SUPT20H-222	ENST00000495071	RUNX2	Q13950	521 aa		12.42	□□□□□ -0.42
SUPT20H-222	ENST00000495071	GARNL3	Q5VVW2	1013 aa		12.42	□□□□□ -0.42
SUPT20H-222	ENST00000495071	UBE2Q1	Q7Z7E8	422 aa		12.42	□□□□□ -0.42
SUPT20H-222	ENST00000495071	ANGPTL6	Q8NI99	470 aa		12.42	□□□□□ -0.42
SUPT20H-222	ENST00000495071	PEX11G	Q96HA9	241 aa		12.42	□□□□□ -0.42
SUPT20H-222	ENST00000495071	SERINC2	Q96SA4	455 aa		12.42	□□□□□ -0.42
SUPT20H-222	ENST00000495071	C1QTNF7	Q9BXJ2	289 aa		12.42	□□□□□ -0.42
SUPT20H-222	ENST00000495071	CHIA	Q9BZP6	476 aa		12.42	□□□□□ -0.42
SUPT20H-222	ENST00000495071	ZNF350	Q9GZX5	532 aa		12.42	□□□□□ -0.42
SUPT20H-222	ENST00000495071	FGF22	Q9HCT0	170 aa		12.42	□□□□□ -0.42
SUPT20H-222	ENST00000495071	COPZ2	Q9P299	210 aa		12.42	□□□□□ -0.42
SUPT20H-222	ENST00000495071	ZNF223	Q9UK11	482 aa	Predicted RBP	12.42	□□□□□ -0.42
SUPT20H-222	ENST00000495071	NPFFR2	Q9Y5X5	522 aa		12.42	□□□□□ -0.42
SUPT20H-222	ENST00000495071	MDC1	Q14676	2089 aa	Known RBP	12.42	□□□□□ -0.42
SUPT20H-222	ENST00000495071	TRBV2	A0A0J9YWF9	115 aa		12.42	□□□□□ -0.42
SUPT20H-222	ENST00000495071	C5AR1	P21730	350 aa		12.42	□□□□□ -0.42
SUPT20H-222	ENST00000495071	BTC	P35070	178 aa		12.42	□□□□□ -0.42
SUPT20H-222	ENST00000495071	GJA4	P35212	333 aa		12.42	□□□□□ -0.42
SUPT20H-222	ENST00000495071	RAB14	P61106	215 aa		12.42	□□□□□ -0.42
SUPT20H-222	ENST00000495071	POU4F3	Q15319	338 aa		12.42	□□□□□ -0.42
SUPT20H-222	ENST00000495071	CEBPE	Q15744	281 aa		12.42	□□□□□ -0.42
SUPT20H-222	ENST00000495071	HACD4	Q5VWC8	232 aa		12.42	□□□□□ -0.42
SUPT20H-222	ENST00000495071	CD276	Q5ZPR3	534 aa		12.42	□□□□□ -0.42
SUPT20H-222	ENST00000495071	TEX261	Q6UWH6	196 aa		12.42	□□□□□ -0.42
SUPT20H-222	ENST00000495071	NUDT18	Q6ZVK8	323 aa		12.42	□□□□□ -0.42
SUPT20H-222	ENST00000495071	SSX6	Q7RTT6	188 aa		12.42	□□□□□ -0.42
SUPT20H-222	ENST00000495071	HSD17B8	Q92506	261 aa		12.42	□□□□□ -0.42
SUPT20H-222	ENST00000495071	YIPF5	Q969M3	257 aa		12.42	□□□□□ -0.42
SUPT20H-222	ENST00000495071	APOO	Q9BUR5	198 aa		12.42	□□□□□ -0.42
SUPT20H-222	ENST00000495071	TBC1D29	Q9UFV1	150 aa		12.42	□□□□□ -0.42
SUPT20H-222	ENST00000495071		U3KQ87	197 aa		12.42	□□□□□ -0.42
SUPT20H-222	ENST00000495071	C7orf66	A4D0T2	115 aa		12.41	□□□□□ -0.42
SUPT20H-222	ENST00000495071	LEUTX	A8MZ59	168 aa		12.41	□□□□□ -0.42
SUPT20H-222	ENST00000495071	POLR2C	P19387	275 aa	Predicted RBP	12.41	□□□□□ -0.42
SUPT20H-222	ENST00000495071	CD53	P19397	219 aa		12.41	□□□□□ -0.42
SUPT20H-222	ENST00000495071	ACTR1B	P42025	376 aa		12.41	□□□□□ -0.42
SUPT20H-222	ENST00000495071	ACTR1A	P61163	376 aa		12.41	□□□□□ -0.42
SUPT20H-222	ENST00000495071	RTL4	Q6ZR62	310 aa		12.41	□□□□□ -0.42
SUPT20H-222	ENST00000495071	PAQR7	Q86WK9	346 aa		12.41	□□□□□ -0.42
SUPT20H-222	ENST00000495071	CDRT4	Q8N9R6	151 aa		12.41	□□□□□ -0.42
SUPT20H-222	ENST00000495071	OR6K6	Q8NGW6	343 aa		12.41	□□□□□ -0.42
SUPT20H-222	ENST00000495071	LRRC20	Q8TCA0	184 aa		12.41	□□□□□ -0.42
SUPT20H-222	ENST00000495071	ADAMTS14	Q8WXS8	1223 aa		12.41	□□□□□ -0.42
SUPT20H-222	ENST00000495071	OR2M4	Q96R27	311 aa		12.41	□□□□□ -0.42
SUPT20H-222	ENST00000495071	OR14A2	Q96R54	314 aa		12.41	□□□□□ -0.42
SUPT20H-222	ENST00000495071	IL23A	Q9NPF7	189 aa		12.41	□□□□□ -0.42
SUPT20H-222	ENST00000495071	RPS6KB2	Q9UBS0	482 aa		12.41	□□□□□ -0.42
SUPT20H-222	ENST00000495071	DAPP1	Q9UN19	280 aa		12.41	□□□□□ -0.42
SUPT20H-222	ENST00000495071		A0A0C4DFX4	3053 aa		12.41	□□□□□ -0.42
SUPT20H-222	ENST00000495071	ADH1B	P00325	375 aa		12.41	□□□□□ -0.42
SUPT20H-222	ENST00000495071	VSX2	P58304	361 aa	Predicted RBP	12.41	□□□□□ -0.42
SUPT20H-222	ENST00000495071	POU6F2	P78424	691 aa	Predicted RBP	12.41	□□□□□ -0.42
SUPT20H-222	ENST00000495071	HSF2	Q03933	536 aa		12.41	□□□□□ -0.42
SUPT20H-222	ENST00000495071	RUNX3	Q13761	415 aa		12.41	□□□□□ -0.42
SUPT20H-222	ENST00000495071	SLC36A2	Q495M3	483 aa		12.41	□□□□□ -0.42
SUPT20H-222	ENST00000495071	ENPP7	Q6UWV6	458 aa		12.41	□□□□□ -0.42
SUPT20H-222	ENST00000495071	RFLNB	Q8N5W9	214 aa		12.41	□□□□□ -0.42
SUPT20H-222	ENST00000495071	OR2T35	Q8NGX2	323 aa		12.41	□□□□□ -0.42
SUPT20H-222	ENST00000495071	CNOT9	Q92600	299 aa	Known RBP	12.41	□□□□□ -0.42
SUPT20H-222	ENST00000495071	RERG	Q96A58	199 aa	Predicted RBP	12.41	□□□□□ -0.42
SUPT20H-222	ENST00000495071	MAP6	Q96JE9	813 aa		12.41	□□□□□ -0.42
SUPT20H-222	ENST00000495071	ORAI3	Q9BRQ5	295 aa		12.41	□□□□□ -0.42
SUPT20H-222	ENST00000495071	SPATA2	Q9UM82	520 aa		12.41	□□□□□ -0.42
SUPT20H-222	ENST00000495071	C5orf42	Q9H799	3197 aa		12.41	□□□□□ -0.42
SUPT20H-222	ENST00000495071		A0A0G2JK05	382 aa		12.41	□□□□□ -0.42
SUPT20H-222	ENST00000495071	TRABD2B	A6NFA1	517 aa		12.41	□□□□□ -0.42
SUPT20H-222	ENST00000495071	PSMB10	P40306	273 aa		12.41	□□□□□ -0.42
SUPT20H-222	ENST00000495071	STX4	Q12846	297 aa		12.41	□□□□□ -0.42
SUPT20H-222	ENST00000495071	HSD17B12	Q53GQ0	312 aa		12.41	□□□□□ -0.42
SUPT20H-222	ENST00000495071	OR11H4	Q8NGC9	324 aa		12.41	□□□□□ -0.42
SUPT20H-222	ENST00000495071	LGALS14	Q8TCE9	139 aa		12.41	□□□□□ -0.42
SUPT20H-222	ENST00000495071	PDCD1LG2	Q9BQ51	273 aa		12.41	□□□□□ -0.42
SUPT20H-222	ENST00000495071	AUNIP	Q9H7T9	357 aa		12.41	□□□□□ -0.42
SUPT20H-222	ENST00000495071	ZFP64	Q9NPA5	681 aa		12.41	□□□□□ -0.42
SUPT20H-222	ENST00000495071	ABRACL	Q9P1F3	81 aa		12.41	□□□□□ -0.42
SUPT20H-222	ENST00000495071	C19orf53	Q9UNZ5	99 aa	Predicted RBP	12.41	□□□□□ -0.42
SUPT20H-222	ENST00000495071	SLC17A4	Q9Y2C5	497 aa		12.41	□□□□□ -0.42
SUPT20H-222	ENST00000495071	SPEF1	Q9Y4P9	236 aa		12.41	□□□□□ -0.42
SUPT20H-222	ENST00000495071	KNL1	Q8NG31	2342 aa		12.4	□□□□□ -0.42
SUPT20H-222	ENST00000495071	GXYLT2	A0PJZ3	443 aa		12.4	□□□□□ -0.42
SUPT20H-222	ENST00000495071	P2RX6	O15547	441 aa		12.4	□□□□□ -0.42
SUPT20H-222	ENST00000495071	RAF1	P04049	648 aa		12.4	□□□□□ -0.42
SUPT20H-222	ENST00000495071	APOD	P05090	189 aa		12.4	□□□□□ -0.42
SUPT20H-222	ENST00000495071	EPX	P11678	715 aa		12.4	□□□□□ -0.42
SUPT20H-222	ENST00000495071	IL9	P15248	144 aa		12.4	□□□□□ -0.42
SUPT20H-222	ENST00000495071	IGFALS	P35858	605 aa		12.4	□□□□□ -0.42
SUPT20H-222	ENST00000495071	RPL6	Q02878	288 aa	Known RBP	12.4	□□□□□ -0.42
SUPT20H-222	ENST00000495071	SNTA1	Q13424	505 aa		12.4	□□□□□ -0.42
SUPT20H-222	ENST00000495071	PRRT3	Q5FWE3	981 aa		12.4	□□□□□ -0.42
SUPT20H-222	ENST00000495071	ALG10B	Q5I7T1	473 aa		12.4	□□□□□ -0.42
SUPT20H-222	ENST00000495071	HES5	Q5TA89	166 aa		12.4	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms