RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 LRIF1Q5T3J3 769 aa15.78■□□□□ 0.12
HDAC4-211ENST00000494800 MRPL2Q5T653 305 aaKnown RBP15.78■□□□□ 0.12
HDAC4-211ENST00000494800 PRAMEF8Q5VWM4 474 aa15.78■□□□□ 0.12
HDAC4-211ENST00000494800 PRAMEF7Q5VXH5 474 aa15.78■□□□□ 0.12
HDAC4-211ENST00000494800 METTL21CQ5VZV1 264 aa15.78■□□□□ 0.12
HDAC4-211ENST00000494800 FCRLAQ7L513 359 aa15.78■□□□□ 0.12
HDAC4-211ENST00000494800 RNF128Q8TEB7 428 aa15.78■□□□□ 0.12
HDAC4-211ENST00000494800 ROBO4Q8WZ75 1007 aa15.78■□□□□ 0.12
HDAC4-211ENST00000494800 CNOT9Q92600 299 aaKnown RBP15.78■□□□□ 0.12
HDAC4-211ENST00000494800 ZHX1-C8orf76Q96EF9 292 aa15.78■□□□□ 0.12
HDAC4-211ENST00000494800 TMEM19Q96HH6 336 aa15.78■□□□□ 0.12
HDAC4-211ENST00000494800 CLEC4MQ9H2X3 399 aaPredicted RBP15.78■□□□□ 0.12
HDAC4-211ENST00000494800 PLSCR4Q9NRQ2 329 aa15.78■□□□□ 0.12
HDAC4-211ENST00000494800 CHRNA9Q9UGM1 479 aa15.78■□□□□ 0.12
HDAC4-211ENST00000494800 IFT52Q9Y366 437 aa15.78■□□□□ 0.12
HDAC4-211ENST00000494800 FBN2P35556 2912 aa15.78■□□□□ 0.12
HDAC4-211ENST00000494800 DSPPQ9NZW4 1301 aa15.77■□□□□ 0.12
HDAC4-211ENST00000494800 DCHS2Q6V1P9 2916 aa15.77■□□□□ 0.12
HDAC4-211ENST00000494800 ANGPT2O15123 496 aa15.77■□□□□ 0.12
HDAC4-211ENST00000494800 CGAP01215 116 aa15.77■□□□□ 0.12
HDAC4-211ENST00000494800 THBS1P07996 1170 aa15.77■□□□□ 0.12
HDAC4-211ENST00000494800 ENPP1P22413 925 aa15.77■□□□□ 0.12
HDAC4-211ENST00000494800 CLK1P49759 484 aaKnown RBP15.77■□□□□ 0.12
HDAC4-211ENST00000494800 COPZ1P61923 177 aa15.77■□□□□ 0.12
HDAC4-211ENST00000494800 SYT14P1Q58G82 188 aa15.77■□□□□ 0.12
HDAC4-211ENST00000494800 ZNF610Q8N9Z0 462 aa15.77■□□□□ 0.12
HDAC4-211ENST00000494800 BBS10Q8TAM1 723 aa15.77■□□□□ 0.12
HDAC4-211ENST00000494800 GPATCH1Q9BRR8 931 aaKnown RBP15.77■□□□□ 0.12
HDAC4-211ENST00000494800 CCDC106Q9BWC9 280 aa15.77■□□□□ 0.12
HDAC4-211ENST00000494800 SRXN1Q9BYN0 137 aa15.77■□□□□ 0.12
HDAC4-211ENST00000494800 COQ10BQ9H8M1 238 aa15.77■□□□□ 0.12
HDAC4-211ENST00000494800 A4GALTQ9NPC4 353 aa15.77■□□□□ 0.12
HDAC4-211ENST00000494800 MED4Q9NPJ6 270 aa15.77■□□□□ 0.12
HDAC4-211ENST00000494800 CTPS2Q9NRF8 586 aa15.77■□□□□ 0.12
HDAC4-211ENST00000494800 RASSF1Q9NS23 344 aa15.77■□□□□ 0.12
HDAC4-211ENST00000494800 ZNF446Q9NWS9 450 aa15.77■□□□□ 0.12
HDAC4-211ENST00000494800 ZNF226Q9NYT6 803 aa15.77■□□□□ 0.12
HDAC4-211ENST00000494800 KLHL9Q9P2J3 617 aa15.77■□□□□ 0.12
HDAC4-211ENST00000494800 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.77■□□□□ 0.12
HDAC4-211ENST00000494800 LEF1Q9UJU2 399 aaPredicted RBP15.77■□□□□ 0.12
HDAC4-211ENST00000494800 PCNX3Q9H6A9 2034 aa15.77■□□□□ 0.11
HDAC4-211ENST00000494800 ABCA12Q86UK0 2595 aa15.77■□□□□ 0.11
HDAC4-211ENST00000494800 A0A1W2PNR3 127 aa15.76■□□□□ 0.11
HDAC4-211ENST00000494800 C16orf97H3BN30 126 aa15.76■□□□□ 0.11
HDAC4-211ENST00000494800 SULT2B1O00204 365 aa15.76■□□□□ 0.11
HDAC4-211ENST00000494800 FAAHO00519 579 aa15.76■□□□□ 0.11
HDAC4-211ENST00000494800 BCAS1O75363 584 aaPredicted RBP15.76■□□□□ 0.11
HDAC4-211ENST00000494800 AGTR1P30556 359 aa15.76■□□□□ 0.11
HDAC4-211ENST00000494800 POLR2HP52434 150 aaKnown RBP15.76■□□□□ 0.11
HDAC4-211ENST00000494800 MAP2K6P52564 334 aa15.76■□□□□ 0.11
HDAC4-211ENST00000494800 FAM27E3Q08E93 113 aa15.76■□□□□ 0.11
HDAC4-211ENST00000494800 EXOC3L2Q2M3D2 409 aa15.76■□□□□ 0.11
HDAC4-211ENST00000494800 GCNT6Q5T4J0 391 aa15.76■□□□□ 0.11
HDAC4-211ENST00000494800 RNF220Q5VTB9 566 aa15.76■□□□□ 0.11
HDAC4-211ENST00000494800 ZNF474Q6S9Z5 364 aaPredicted RBP15.76■□□□□ 0.11
HDAC4-211ENST00000494800 BEND4Q6ZU67 534 aa15.76■□□□□ 0.11
HDAC4-211ENST00000494800 ZNF550Q7Z398 422 aa15.76■□□□□ 0.11
HDAC4-211ENST00000494800 MED18Q9BUE0 208 aa15.76■□□□□ 0.11
HDAC4-211ENST00000494800 KLHL13Q9P2N7 655 aa15.76■□□□□ 0.11
HDAC4-211ENST00000494800 ZNF443Q9Y2A4 671 aaPredicted RBP15.76■□□□□ 0.11
HDAC4-211ENST00000494800 NDUFAF1Q9Y375 327 aa15.76■□□□□ 0.11
HDAC4-211ENST00000494800 HDGFL3Q9Y3E1 203 aa15.76■□□□□ 0.11
HDAC4-211ENST00000494800 LRBAP50851 2863 aa15.76■□□□□ 0.11
HDAC4-211ENST00000494800 CDHR4A6H8M9 788 aa15.75■□□□□ 0.11
HDAC4-211ENST00000494800 YES1P07947 543 aa15.75■□□□□ 0.11
HDAC4-211ENST00000494800 VIMP08670 466 aaKnown RBP15.75■□□□□ 0.11
HDAC4-211ENST00000494800 BMP2P12643 396 aa15.75■□□□□ 0.11
HDAC4-211ENST00000494800 UGT2B10P36537 528 aa15.75■□□□□ 0.11
HDAC4-211ENST00000494800 SLC1A3P43003 542 aa15.75■□□□□ 0.11
HDAC4-211ENST00000494800 DIO1P49895 249 aa15.75■□□□□ 0.11
HDAC4-211ENST00000494800 EPS8Q12929 822 aa15.75■□□□□ 0.11
HDAC4-211ENST00000494800 MAPK11Q15759 364 aa15.75■□□□□ 0.11
HDAC4-211ENST00000494800 ZNF311Q5JNZ3 666 aa15.75■□□□□ 0.11
HDAC4-211ENST00000494800 RPS26P11Q5JNZ5 115 aaPredicted RBP15.75■□□□□ 0.11
HDAC4-211ENST00000494800 PAGE3Q5JUK9 113 aa15.75■□□□□ 0.11
HDAC4-211ENST00000494800 ZNF836Q6ZNA1 936 aa15.75■□□□□ 0.11
HDAC4-211ENST00000494800 TMPPEQ6ZT21 453 aa15.75■□□□□ 0.11
HDAC4-211ENST00000494800 VRK2Q86Y07 508 aa15.75■□□□□ 0.11
HDAC4-211ENST00000494800 KRT73Q86Y46 540 aa15.75■□□□□ 0.11
HDAC4-211ENST00000494800 TSPEARQ8WU66 669 aa15.75■□□□□ 0.11
HDAC4-211ENST00000494800 ABHD3Q8WU67 409 aa15.75■□□□□ 0.11
HDAC4-211ENST00000494800 ZNF524Q96C55 264 aa15.75■□□□□ 0.11
HDAC4-211ENST00000494800 DDIT4LQ96D03 193 aa15.75■□□□□ 0.11
HDAC4-211ENST00000494800 SPATA5L1Q9BVQ7 753 aa15.75■□□□□ 0.11
HDAC4-211ENST00000494800 SPATA9Q9BWV2 254 aa15.75■□□□□ 0.11
HDAC4-211ENST00000494800 KLHL4Q9C0H6 718 aa15.75■□□□□ 0.11
HDAC4-211ENST00000494800 BCL2L10Q9HD36 194 aa15.75■□□□□ 0.11
HDAC4-211ENST00000494800 SLC25A37Q9NYZ2 338 aa15.75■□□□□ 0.11
HDAC4-211ENST00000494800 FAM221AA4D161 298 aa15.74■□□□□ 0.11
HDAC4-211ENST00000494800 AP3D1O14617 1153 aa15.74■□□□□ 0.11
HDAC4-211ENST00000494800 DNPH1O43598 174 aa15.74■□□□□ 0.11
HDAC4-211ENST00000494800 HOXB9P17482 250 aaPredicted RBP15.74■□□□□ 0.11
HDAC4-211ENST00000494800 MAL2Q969L2 176 aa15.74■□□□□ 0.11
HDAC4-211ENST00000494800 TMEM120AQ9BXJ8 343 aa15.74■□□□□ 0.11
HDAC4-211ENST00000494800 C12orf49Q9H741 205 aa15.74■□□□□ 0.11
HDAC4-211ENST00000494800 SLC52A3Q9NQ40 469 aa15.74■□□□□ 0.11
HDAC4-211ENST00000494800 RLIMQ9NVW2 624 aa15.74■□□□□ 0.11
HDAC4-211ENST00000494800 VAPAQ9P0L0 249 aa15.74■□□□□ 0.11
HDAC4-211ENST00000494800 SLAMF8Q9P0V8 285 aa15.74■□□□□ 0.11
HDAC4-211ENST00000494800 ITGB1BP2Q9UKP3 347 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms