RNA–Protein interactions for RNA: ENST00000494674.1

PRPF4B-209, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 5

Gene PRPF4B, Length 1,727 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-209ENST00000494674 TMEM221A6NGB7 291 aa9.72□□□□□ -0.85
PRPF4B-209ENST00000494674 SNTNA6NMZ2 147 aa9.72□□□□□ -0.85
PRPF4B-209ENST00000494674 C17orf51A8MQB3 221 aa9.72□□□□□ -0.85
PRPF4B-209ENST00000494674 IDSB3KWA1 339 aa9.72□□□□□ -0.85
PRPF4B-209ENST00000494674 D6RAR5 112 aa9.72□□□□□ -0.85
PRPF4B-209ENST00000494674 M0R296 226 aa9.72□□□□□ -0.85
PRPF4B-209ENST00000494674 SCDO00767 359 aa9.72□□□□□ -0.85
PRPF4B-209ENST00000494674 GNB5O14775 395 aa9.72□□□□□ -0.85
PRPF4B-209ENST00000494674 ZNF264O43296 627 aa9.72□□□□□ -0.85
PRPF4B-209ENST00000494674 GDF9O60383 454 aa9.72□□□□□ -0.85
PRPF4B-209ENST00000494674 ABCD3P28288 659 aa9.72□□□□□ -0.85
PRPF4B-209ENST00000494674 CLK1P49759 484 aaKnown RBP9.72□□□□□ -0.85
PRPF4B-209ENST00000494674 NR0B1P51843 470 aaKnown RBP9.72□□□□□ -0.85
PRPF4B-209ENST00000494674 FOXK2Q01167 660 aa9.72□□□□□ -0.85
PRPF4B-209ENST00000494674 DBPQ10586 325 aaPredicted RBP9.72□□□□□ -0.85
PRPF4B-209ENST00000494674 CLPPQ16740 277 aaPredicted RBP9.72□□□□□ -0.85
PRPF4B-209ENST00000494674 ZNF829Q3KNS6 432 aaPredicted RBP9.72□□□□□ -0.85
PRPF4B-209ENST00000494674 ANKDD1AQ495B1 522 aa9.72□□□□□ -0.85
PRPF4B-209ENST00000494674 FAAH2Q6GMR7 532 aa9.72□□□□□ -0.85
PRPF4B-209ENST00000494674 LCN10Q6JVE6 187 aa9.72□□□□□ -0.85
PRPF4B-209ENST00000494674 PLBD1Q6P4A8 553 aa9.72□□□□□ -0.85
PRPF4B-209ENST00000494674 LINC00299Q6ZSB3 139 aa9.72□□□□□ -0.85
PRPF4B-209ENST00000494674 SLC15A4Q8N697 577 aa9.72□□□□□ -0.85
PRPF4B-209ENST00000494674 SIRT6Q8N6T7 355 aa9.72□□□□□ -0.85
PRPF4B-209ENST00000494674 BMPERQ8N8U9 685 aa9.72□□□□□ -0.85
PRPF4B-209ENST00000494674 APCDD1LQ8NCL9 501 aa9.72□□□□□ -0.85
PRPF4B-209ENST00000494674 OR4F15Q8NGB8 312 aa9.72□□□□□ -0.85
PRPF4B-209ENST00000494674 PHOSPHO1Q8TCT1 267 aa9.72□□□□□ -0.85
PRPF4B-209ENST00000494674 TM9SF4Q92544 642 aa9.72□□□□□ -0.85
PRPF4B-209ENST00000494674 RFKQ969G6 155 aa9.72□□□□□ -0.85
PRPF4B-209ENST00000494674 OMA1Q96E52 524 aa9.72□□□□□ -0.85
PRPF4B-209ENST00000494674 WDR77Q9BQA1 342 aaPredicted RBP9.72□□□□□ -0.85
PRPF4B-209ENST00000494674 CHCHD6Q9BRQ6 235 aa9.72□□□□□ -0.85
PRPF4B-209ENST00000494674 IFT27Q9BW83 186 aa9.72□□□□□ -0.85
PRPF4B-209ENST00000494674 JAM3Q9BX67 310 aa9.72□□□□□ -0.85
PRPF4B-209ENST00000494674 MED20Q9H944 212 aa9.72□□□□□ -0.85
PRPF4B-209ENST00000494674 AKIP1Q9NQ31 210 aa9.72□□□□□ -0.85
PRPF4B-209ENST00000494674 NDUFB11Q9NX14 153 aa9.72□□□□□ -0.85
PRPF4B-209ENST00000494674 RPS6KB2Q9UBS0 482 aa9.72□□□□□ -0.85
PRPF4B-209ENST00000494674 COPS7AQ9UBW8 275 aa9.72□□□□□ -0.85
PRPF4B-209ENST00000494674 CORINQ9Y5Q5 1042 aa9.72□□□□□ -0.85
PRPF4B-209ENST00000494674 LOC100506127A0A0U1RQW1 187 aa9.71□□□□□ -0.85
PRPF4B-209ENST00000494674 A0A1W2PQD3 144 aa9.71□□□□□ -0.85
PRPF4B-209ENST00000494674 SYNDIG1LA6NDD5 238 aa9.71□□□□□ -0.85
PRPF4B-209ENST00000494674 CCDC182A6NF36 153 aa9.71□□□□□ -0.85
PRPF4B-209ENST00000494674 LRRN3E7EW58 273 aa9.71□□□□□ -0.85
PRPF4B-209ENST00000494674 MYL12BO14950 172 aa9.71□□□□□ -0.85
PRPF4B-209ENST00000494674 REM1O75628 298 aa9.71□□□□□ -0.85
PRPF4B-209ENST00000494674 PPP1R3DO95685 299 aa9.71□□□□□ -0.85
PRPF4B-209ENST00000494674 FGF5P12034 268 aa9.71□□□□□ -0.85
PRPF4B-209ENST00000494674 BMP7P18075 431 aa9.71□□□□□ -0.85
PRPF4B-209ENST00000494674 SLC2A5P22732 501 aa9.71□□□□□ -0.85
PRPF4B-209ENST00000494674 RPS3AP61247 264 aaKnown RBP9.71□□□□□ -0.85
PRPF4B-209ENST00000494674 RPS4XP62701 263 aaKnown RBP9.71□□□□□ -0.85
PRPF4B-209ENST00000494674 ZNF117Q03924 483 aa9.71□□□□□ -0.85
PRPF4B-209ENST00000494674 PLCXD2Q0VAA5 305 aa9.71□□□□□ -0.85
PRPF4B-209ENST00000494674 DGUOKQ16854 277 aa9.71□□□□□ -0.85
PRPF4B-209ENST00000494674 SLC35F1Q5T1Q4 408 aa9.71□□□□□ -0.85
PRPF4B-209ENST00000494674 OR2G6Q5TZ20 316 aa9.71□□□□□ -0.85
PRPF4B-209ENST00000494674 WBP2NLQ6ICG8 309 aa9.71□□□□□ -0.85
PRPF4B-209ENST00000494674 SLC29A4Q7RTT9 530 aa9.71□□□□□ -0.85
PRPF4B-209ENST00000494674 OVCH1Q7RTY7 1134 aa9.71□□□□□ -0.85
PRPF4B-209ENST00000494674 OAFQ86UD1 273 aa9.71□□□□□ -0.85
PRPF4B-209ENST00000494674 SLC43A2Q8N370 569 aa9.71□□□□□ -0.85
PRPF4B-209ENST00000494674 MFSD4AQ8N468 514 aa9.71□□□□□ -0.85
PRPF4B-209ENST00000494674 LRRC17Q8N6Y2 441 aa9.71□□□□□ -0.85
PRPF4B-209ENST00000494674 ZBTB44Q8NCP5 570 aa9.71□□□□□ -0.85
PRPF4B-209ENST00000494674 PTP4A1Q93096 173 aa9.71□□□□□ -0.85
PRPF4B-209ENST00000494674 SGTBQ96EQ0 304 aa9.71□□□□□ -0.85
PRPF4B-209ENST00000494674 HSPBAP1Q96EW2 488 aa9.71□□□□□ -0.85
PRPF4B-209ENST00000494674 TRMT61AQ96FX7 289 aaKnown RBP9.71□□□□□ -0.85
PRPF4B-209ENST00000494674 SH3YL1Q96HL8 342 aaPredicted RBP9.71□□□□□ -0.85
PRPF4B-209ENST00000494674 GFM1Q96RP9 751 aaKnown RBP9.71□□□□□ -0.85
PRPF4B-209ENST00000494674 CCNL2Q96S94 520 aaPredicted RBP9.71□□□□□ -0.85
PRPF4B-209ENST00000494674 SPSB2Q99619 263 aa9.71□□□□□ -0.85
PRPF4B-209ENST00000494674 SLC19A3Q9BZV2 496 aa9.71□□□□□ -0.85
PRPF4B-209ENST00000494674 LAT2Q9GZY6 243 aa9.71□□□□□ -0.85
PRPF4B-209ENST00000494674 SMOC1Q9H4F8 434 aa9.71□□□□□ -0.85
PRPF4B-209ENST00000494674 FBXO8Q9NRD0 319 aa9.71□□□□□ -0.85
PRPF4B-209ENST00000494674 CHRNA9Q9UGM1 479 aa9.71□□□□□ -0.85
PRPF4B-209ENST00000494674 MRTO4Q9UKD2 239 aaKnown RBP9.71□□□□□ -0.85
PRPF4B-209ENST00000494674 EXOSC1Q9Y3B2 195 aaKnown RBP9.71□□□□□ -0.85
PRPF4B-209ENST00000494674 GPR179Q6PRD1 2367 aa9.71□□□□□ -0.86
PRPF4B-209ENST00000494674 ZC3H12DA2A288 527 aaKnown RBP9.7□□□□□ -0.86
PRPF4B-209ENST00000494674 METTL15A6NJ78 407 aa9.7□□□□□ -0.86
PRPF4B-209ENST00000494674 SAGE2PA6NJ88 616 aa9.7□□□□□ -0.86
PRPF4B-209ENST00000494674 ALG1L2C9J202 215 aa9.7□□□□□ -0.86
PRPF4B-209ENST00000494674 WWP2O00308 870 aa9.7□□□□□ -0.86
PRPF4B-209ENST00000494674 FADS1O60427 444 aa9.7□□□□□ -0.86
PRPF4B-209ENST00000494674 ZNF354AO60765 605 aaPredicted RBP9.7□□□□□ -0.86
PRPF4B-209ENST00000494674 ALOX12BO75342 701 aa9.7□□□□□ -0.86
PRPF4B-209ENST00000494674 IGF2P01344 180 aa9.7□□□□□ -0.86
PRPF4B-209ENST00000494674 PEPDP12955 493 aa9.7□□□□□ -0.86
PRPF4B-209ENST00000494674 CPEP16870 476 aa9.7□□□□□ -0.86
PRPF4B-209ENST00000494674 MYL12AP19105 171 aa9.7□□□□□ -0.86
PRPF4B-209ENST00000494674 NOS3P29474 1203 aa9.7□□□□□ -0.86
PRPF4B-209ENST00000494674 IDUAP35475 653 aa9.7□□□□□ -0.86
PRPF4B-209ENST00000494674 SLC1A3P43003 542 aa9.7□□□□□ -0.86
PRPF4B-209ENST00000494674 CRYBB2P43320 205 aa9.7□□□□□ -0.86
PRPF4B-209ENST00000494674 PNLIPRP2P54317 469 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms