RNA–Protein interactions for RNA: ENST00000494411.5

PCMT1-209, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase, humanhuman

TSL 4

Gene PCMT1, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMT1-209ENST00000494411 ROBO4Q8WZ75 1007 aa17.08■□□□□ 0.32
PCMT1-209ENST00000494411 CPNE4Q96A23 557 aaPredicted RBP17.08■□□□□ 0.32
PCMT1-209ENST00000494411 GMPPAQ96IJ6 420 aaPredicted RBP17.08■□□□□ 0.32
PCMT1-209ENST00000494411 LURAP1Q96LR2 239 aa17.08■□□□□ 0.32
PCMT1-209ENST00000494411 CCDC106Q9BWC9 280 aa17.08■□□□□ 0.32
PCMT1-209ENST00000494411 MCCC2Q9HCC0 563 aa17.08■□□□□ 0.32
PCMT1-209ENST00000494411 TIGARQ9NQ88 270 aa17.08■□□□□ 0.32
PCMT1-209ENST00000494411 CTPS2Q9NRF8 586 aa17.08■□□□□ 0.32
PCMT1-209ENST00000494411 SERINC1Q9NRX5 453 aa17.08■□□□□ 0.32
PCMT1-209ENST00000494411 ZNF443Q9Y2A4 671 aaPredicted RBP17.08■□□□□ 0.32
PCMT1-209ENST00000494411 NDUFAF1Q9Y375 327 aa17.08■□□□□ 0.32
PCMT1-209ENST00000494411 GMEB1Q9Y692 573 aa17.08■□□□□ 0.32
PCMT1-209ENST00000494411 AKAP6Q13023 2319 aa17.08■□□□□ 0.32
PCMT1-209ENST00000494411 OTOGQ6ZRI0 2925 aa17.07■□□□□ 0.32
PCMT1-209ENST00000494411 ATP8B1O43520 1251 aa17.07■□□□□ 0.32
PCMT1-209ENST00000494411 SS18L1O75177 396 aaPredicted RBP17.07■□□□□ 0.32
PCMT1-209ENST00000494411 MDH1P40925 334 aaKnown RBP17.07■□□□□ 0.32
PCMT1-209ENST00000494411 IDH2P48735 452 aaKnown RBP17.07■□□□□ 0.32
PCMT1-209ENST00000494411 GRINAQ7Z429 371 aa17.07■□□□□ 0.32
PCMT1-209ENST00000494411 DHDDSQ86SQ9 333 aa17.07■□□□□ 0.32
PCMT1-209ENST00000494411 RETREG3Q86VR2 466 aa17.07■□□□□ 0.32
PCMT1-209ENST00000494411 LSRQ86X29 649 aaPredicted RBP17.07■□□□□ 0.32
PCMT1-209ENST00000494411 RNF128Q8TEB7 428 aa17.07■□□□□ 0.32
PCMT1-209ENST00000494411 OR5B2Q96R09 309 aa17.07■□□□□ 0.32
PCMT1-209ENST00000494411 CPPED1Q9BRF8 314 aaPredicted RBP17.07■□□□□ 0.32
PCMT1-209ENST00000494411 BCL2L10Q9HD36 194 aa17.07■□□□□ 0.32
PCMT1-209ENST00000494411 EMC9Q9Y3B6 208 aa17.07■□□□□ 0.32
PCMT1-209ENST00000494411 ABCA4P78363 2273 aa17.07■□□□□ 0.32
PCMT1-209ENST00000494411 CFAP73A6NFT4 308 aa17.06■□□□□ 0.32
PCMT1-209ENST00000494411 TUBAL3A6NHL2 446 aa17.06■□□□□ 0.32
PCMT1-209ENST00000494411 C5orf58C9J3I9 102 aa17.06■□□□□ 0.32
PCMT1-209ENST00000494411 CGAP01215 116 aa17.06■□□□□ 0.32
PCMT1-209ENST00000494411 THBS1P07996 1170 aa17.06■□□□□ 0.32
PCMT1-209ENST00000494411 ARAFP10398 606 aa17.06■□□□□ 0.32
PCMT1-209ENST00000494411 APOBEC1P41238 236 aaKnown RBP17.06■□□□□ 0.32
PCMT1-209ENST00000494411 CTBP2P56545 445 aa17.06■□□□□ 0.32
PCMT1-209ENST00000494411 EPS8Q12929 822 aa17.06■□□□□ 0.32
PCMT1-209ENST00000494411 LARS2Q15031 903 aaKnown RBP17.06■□□□□ 0.32
PCMT1-209ENST00000494411 SYT14P1Q58G82 188 aa17.06■□□□□ 0.32
PCMT1-209ENST00000494411 RNF220Q5VTB9 566 aa17.06■□□□□ 0.32
PCMT1-209ENST00000494411 PRAMEF8Q5VWM4 474 aa17.06■□□□□ 0.32
PCMT1-209ENST00000494411 PRAMEF7Q5VXH5 474 aa17.06■□□□□ 0.32
PCMT1-209ENST00000494411 ZNF474Q6S9Z5 364 aaPredicted RBP17.06■□□□□ 0.32
PCMT1-209ENST00000494411 DPP10Q8N608 796 aa17.06■□□□□ 0.32
PCMT1-209ENST00000494411 NFKBIDQ8NI38 313 aa17.06■□□□□ 0.32
PCMT1-209ENST00000494411 BBS10Q8TAM1 723 aa17.06■□□□□ 0.32
PCMT1-209ENST00000494411 ABHD3Q8WU67 409 aa17.06■□□□□ 0.32
PCMT1-209ENST00000494411 REXO5Q96IC2 774 aaKnown RBP17.06■□□□□ 0.32
PCMT1-209ENST00000494411 CACYBPQ9HB71 228 aaKnown RBP17.06■□□□□ 0.32
PCMT1-209ENST00000494411 CHRNA9Q9UGM1 479 aa17.06■□□□□ 0.32
PCMT1-209ENST00000494411 PROCRQ9UNN8 238 aa17.06■□□□□ 0.32
PCMT1-209ENST00000494411 CORO2BQ9UQ03 480 aa17.06■□□□□ 0.32
PCMT1-209ENST00000494411 CHST2Q9Y4C5 530 aa17.06■□□□□ 0.32
PCMT1-209ENST00000494411 AKAP9Q99996 3911 aa17.05■□□□□ 0.32
PCMT1-209ENST00000494411 IGHV3-15A0A0B4J1V0 119 aa17.05■□□□□ 0.32
PCMT1-209ENST00000494411 EVPLLA8MZ36 301 aa17.05■□□□□ 0.32
PCMT1-209ENST00000494411 FAAHO00519 579 aa17.05■□□□□ 0.32
PCMT1-209ENST00000494411 PGM3O95394 542 aa17.05■□□□□ 0.32
PCMT1-209ENST00000494411 PABPC4LP0CB38 370 aaKnown RBP17.05■□□□□ 0.32
PCMT1-209ENST00000494411 GKN3PP0CG01 181 aa17.05■□□□□ 0.32
PCMT1-209ENST00000494411 CD8BP10966 210 aa17.05■□□□□ 0.32
PCMT1-209ENST00000494411 UQCRBP14927 111 aa17.05■□□□□ 0.32
PCMT1-209ENST00000494411 GPX2P18283 190 aa17.05■□□□□ 0.32
PCMT1-209ENST00000494411 RUNDC3AQ59EK9 446 aa17.05■□□□□ 0.32
PCMT1-209ENST00000494411 FCRLAQ7L513 359 aa17.05■□□□□ 0.32
PCMT1-209ENST00000494411 TMEM200AQ86VY9 491 aa17.05■□□□□ 0.32
PCMT1-209ENST00000494411 ZNF440Q8IYI8 595 aa17.05■□□□□ 0.32
PCMT1-209ENST00000494411 CLIP4Q8N3C7 705 aa17.05■□□□□ 0.32
PCMT1-209ENST00000494411 OR6K3Q8NGY3 331 aa17.05■□□□□ 0.32
PCMT1-209ENST00000494411 LINC01560Q8TB33 94 aa17.05■□□□□ 0.32
PCMT1-209ENST00000494411 FAM222BQ8WU58 562 aa17.05■□□□□ 0.32
PCMT1-209ENST00000494411 TSPEARQ8WU66 669 aa17.05■□□□□ 0.32
PCMT1-209ENST00000494411 SLC25A43Q8WUT9 341 aaPredicted RBP17.05■□□□□ 0.32
PCMT1-209ENST00000494411 GLRX2Q9NS18 164 aa17.05■□□□□ 0.32
PCMT1-209ENST00000494411 ZNF232Q9UNY5 417 aa17.05■□□□□ 0.32
PCMT1-209ENST00000494411 SPIN1Q9Y657 262 aaPredicted RBP17.05■□□□□ 0.32
PCMT1-209ENST00000494411 FREM1Q5H8C1 2179 aa17.04■□□□□ 0.32
PCMT1-209ENST00000494411 TFPIP10646 304 aa17.04■□□□□ 0.32
PCMT1-209ENST00000494411 KLK2P20151 261 aa17.04■□□□□ 0.32
PCMT1-209ENST00000494411 CCNA2P20248 432 aa17.04■□□□□ 0.32
PCMT1-209ENST00000494411 ENPP1P22413 925 aa17.04■□□□□ 0.32
PCMT1-209ENST00000494411 AGTR1P30556 359 aa17.04■□□□□ 0.32
PCMT1-209ENST00000494411 SLC1A3P43003 542 aa17.04■□□□□ 0.32
PCMT1-209ENST00000494411 HTR3AP46098 478 aa17.04■□□□□ 0.32
PCMT1-209ENST00000494411 RAC3P60763 192 aa17.04■□□□□ 0.32
PCMT1-209ENST00000494411 CDK6Q00534 326 aa17.04■□□□□ 0.32
PCMT1-209ENST00000494411 FAM27E3Q08E93 113 aa17.04■□□□□ 0.32
PCMT1-209ENST00000494411 NFYCQ13952 458 aa17.04■□□□□ 0.32
PCMT1-209ENST00000494411 ZNF311Q5JNZ3 666 aa17.04■□□□□ 0.32
PCMT1-209ENST00000494411 ADGRG3Q86Y34 549 aa17.04■□□□□ 0.32
PCMT1-209ENST00000494411 ZNF610Q8N9Z0 462 aa17.04■□□□□ 0.32
PCMT1-209ENST00000494411 ANKRD27Q96NW4 1050 aa17.04■□□□□ 0.32
PCMT1-209ENST00000494411 CGREF1Q99674 301 aa17.04■□□□□ 0.32
PCMT1-209ENST00000494411 SPATA9Q9BWV2 254 aa17.04■□□□□ 0.32
PCMT1-209ENST00000494411 OR11A1Q9GZK7 315 aa17.04■□□□□ 0.32
PCMT1-209ENST00000494411 SAR1AQ9NR31 198 aa17.04■□□□□ 0.32
PCMT1-209ENST00000494411 IFT52Q9Y366 437 aa17.04■□□□□ 0.32
PCMT1-209ENST00000494411 TMED7-TICAM2A0A0A6YYA0 188 aa17.03■□□□□ 0.32
PCMT1-209ENST00000494411 SMAD9O15198 467 aaKnown RBP17.03■□□□□ 0.32
PCMT1-209ENST00000494411 PRG2P13727 222 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms