RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 DEFA4P12838 97 aa7.39□□□□□ -1.23
BRCA1-221ENST00000493795 IDUAP35475 653 aa7.39□□□□□ -1.23
BRCA1-221ENST00000493795 PSMB10P40306 273 aa7.39□□□□□ -1.23
BRCA1-221ENST00000493795 RELAQ04206 551 aa7.39□□□□□ -1.23
BRCA1-221ENST00000493795 ACSM1Q08AH1 577 aa7.39□□□□□ -1.23
BRCA1-221ENST00000493795 DOC2AQ14183 400 aa7.39□□□□□ -1.23
BRCA1-221ENST00000493795 PLAG1Q6DJT9 500 aa7.39□□□□□ -1.23
BRCA1-221ENST00000493795 APOOLQ6UXV4 268 aa7.39□□□□□ -1.23
BRCA1-221ENST00000493795 FAM160A2Q8N612 972 aaPredicted RBP7.39□□□□□ -1.23
BRCA1-221ENST00000493795 SLC35G3Q8N808 338 aa7.39□□□□□ -1.23
BRCA1-221ENST00000493795 OR10K1Q8NGX5 313 aa7.39□□□□□ -1.23
BRCA1-221ENST00000493795 LILRB4Q8NHJ6 448 aa7.39□□□□□ -1.23
BRCA1-221ENST00000493795 NSUN5Q96P11 429 aaKnown RBP7.39□□□□□ -1.23
BRCA1-221ENST00000493795 FZD8Q9H461 694 aa7.39□□□□□ -1.23
BRCA1-221ENST00000493795 KDM4FA0A1W2PPD8 638 aa7.39□□□□□ -1.23
BRCA1-221ENST00000493795 A0A1W2PPH5 198 aa7.39□□□□□ -1.23
BRCA1-221ENST00000493795 BET1O15155 118 aa7.39□□□□□ -1.23
BRCA1-221ENST00000493795 TOX4O94842 621 aa7.39□□□□□ -1.23
BRCA1-221ENST00000493795 CT45A10P0DMU9 189 aa7.39□□□□□ -1.23
BRCA1-221ENST00000493795 HAPLN1P10915 354 aaPredicted RBP7.39□□□□□ -1.23
BRCA1-221ENST00000493795 DPP4P27487 766 aa7.39□□□□□ -1.23
BRCA1-221ENST00000493795 RBMS2Q15434 407 aaKnown RBP7.39□□□□□ -1.23
BRCA1-221ENST00000493795 LTC4SQ16873 150 aa7.39□□□□□ -1.23
BRCA1-221ENST00000493795 UNC50Q53HI1 259 aa7.39□□□□□ -1.23
BRCA1-221ENST00000493795 MANEALQ5VSG8 457 aa7.39□□□□□ -1.23
BRCA1-221ENST00000493795 OVCH1Q7RTY7 1134 aa7.39□□□□□ -1.23
BRCA1-221ENST00000493795 GRASPQ7Z6J2 395 aaPredicted RBP7.39□□□□□ -1.23
BRCA1-221ENST00000493795 RNF175Q8N4F7 328 aa7.39□□□□□ -1.23
BRCA1-221ENST00000493795 PXT1Q8NFP0 134 aa7.39□□□□□ -1.23
BRCA1-221ENST00000493795 OR56B1Q8NGI3 324 aa7.39□□□□□ -1.23
BRCA1-221ENST00000493795 DOK4Q8TEW6 326 aa7.39□□□□□ -1.23
BRCA1-221ENST00000493795 ATF6BQ99941 703 aa7.39□□□□□ -1.23
BRCA1-221ENST00000493795 ZNF251Q9BRH9 671 aa7.39□□□□□ -1.23
BRCA1-221ENST00000493795 EVA1AQ9H8M9 152 aa7.39□□□□□ -1.23
BRCA1-221ENST00000493795 ANKMY1Q9P2S6 941 aa7.39□□□□□ -1.23
BRCA1-221ENST00000493795 INSL5Q9Y5Q6 135 aa7.39□□□□□ -1.23
BRCA1-221ENST00000493795 TMEM82A0PJX8 343 aa7.39□□□□□ -1.23
BRCA1-221ENST00000493795 MCRIP1C9JLW8 97 aa7.39□□□□□ -1.23
BRCA1-221ENST00000493795 CHRM4P08173 479 aa7.39□□□□□ -1.23
BRCA1-221ENST00000493795 SYN1P17600 705 aa7.39□□□□□ -1.23
BRCA1-221ENST00000493795 MMP12P39900 470 aa7.39□□□□□ -1.23
BRCA1-221ENST00000493795 EIF2DP41214 584 aaKnown RBP7.39□□□□□ -1.23
BRCA1-221ENST00000493795 SIM1P81133 766 aaPredicted RBP7.39□□□□□ -1.23
BRCA1-221ENST00000493795 SLC25A11Q02978 314 aaKnown RBP7.39□□□□□ -1.23
BRCA1-221ENST00000493795 SQSTM1Q13501 440 aa7.39□□□□□ -1.23
BRCA1-221ENST00000493795 ZNF684Q5T5D7 378 aa7.39□□□□□ -1.23
BRCA1-221ENST00000493795 BTNL8Q6UX41 500 aa7.39□□□□□ -1.23
BRCA1-221ENST00000493795 CD300LGQ6UXG3 332 aa7.39□□□□□ -1.23
BRCA1-221ENST00000493795 WDR5BQ86VZ2 330 aa7.39□□□□□ -1.23
BRCA1-221ENST00000493795 KLHDC8AQ8IYD2 350 aa7.39□□□□□ -1.23
BRCA1-221ENST00000493795 ADGRF3Q8IZF5 1079 aa7.39□□□□□ -1.23
BRCA1-221ENST00000493795 SUMF1Q8NBK3 374 aa7.39□□□□□ -1.23
BRCA1-221ENST00000493795 TMEM239Q8WW34 195 aa7.39□□□□□ -1.23
BRCA1-221ENST00000493795 KLRG1Q96E93 195 aa7.39□□□□□ -1.23
BRCA1-221ENST00000493795 BOCQ9BWV1 1114 aa7.39□□□□□ -1.23
BRCA1-221ENST00000493795 PGAP2Q9UHJ9 254 aa7.39□□□□□ -1.23
BRCA1-221ENST00000493795 CEPT1Q9Y6K0 416 aa7.39□□□□□ -1.23
BRCA1-221ENST00000493795 NKX6-3A6NJ46 265 aa7.39□□□□□ -1.23
BRCA1-221ENST00000493795 ARHGAP33O14559 1287 aa7.39□□□□□ -1.23
BRCA1-221ENST00000493795 TERTO14746 1132 aaKnown RBP7.39□□□□□ -1.23
BRCA1-221ENST00000493795 F3P13726 295 aa7.39□□□□□ -1.23
BRCA1-221ENST00000493795 DMWDQ09019 674 aa7.39□□□□□ -1.23
BRCA1-221ENST00000493795 CRMP1Q14194 572 aa7.39□□□□□ -1.23
BRCA1-221ENST00000493795 ZMAT1Q5H9K5 638 aa7.39□□□□□ -1.23
BRCA1-221ENST00000493795 RPS26P11Q5JNZ5 115 aaPredicted RBP7.39□□□□□ -1.23
BRCA1-221ENST00000493795 FIGLAQ6QHK4 219 aa7.39□□□□□ -1.23
BRCA1-221ENST00000493795 ALKAL2Q6UX46 152 aa7.39□□□□□ -1.23
BRCA1-221ENST00000493795 CDRT4Q8N9R6 151 aa7.39□□□□□ -1.23
BRCA1-221ENST00000493795 YIPF5Q969M3 257 aa7.39□□□□□ -1.23
BRCA1-221ENST00000493795 ERVMER34-1Q9H9K5 563 aa7.39□□□□□ -1.23
BRCA1-221ENST00000493795 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.39□□□□□ -1.23
BRCA1-221ENST00000493795 TM7SF3Q9NS93 570 aa7.39□□□□□ -1.23
BRCA1-221ENST00000493795 GNG12Q9UBI6 72 aa7.39□□□□□ -1.23
BRCA1-221ENST00000493795 CHRNA9Q9UGM1 479 aa7.39□□□□□ -1.23
BRCA1-221ENST00000493795 MYO3AQ8NEV4 1616 aa7.39□□□□□ -1.23
BRCA1-221ENST00000493795 SERTM2A0A1B0GWG4 89 aa7.38□□□□□ -1.23
BRCA1-221ENST00000493795 TNFRSF10AO00220 468 aa7.38□□□□□ -1.23
BRCA1-221ENST00000493795 XRCC3O43542 346 aa7.38□□□□□ -1.23
BRCA1-221ENST00000493795 CIDEAO60543 219 aa7.38□□□□□ -1.23
BRCA1-221ENST00000493795 CYTIPO60759 359 aa7.38□□□□□ -1.23
BRCA1-221ENST00000493795 SCGB1C2P0DMR2 95 aa7.38□□□□□ -1.23
BRCA1-221ENST00000493795 ACKR3P25106 362 aa7.38□□□□□ -1.23
BRCA1-221ENST00000493795 SLC35A2P78381 396 aa7.38□□□□□ -1.23
BRCA1-221ENST00000493795 BAMBIQ13145 260 aa7.38□□□□□ -1.23
BRCA1-221ENST00000493795 KIAA0141Q14154 515 aaPredicted RBP7.38□□□□□ -1.23
BRCA1-221ENST00000493795 OPCMLQ14982 345 aa7.38□□□□□ -1.23
BRCA1-221ENST00000493795 HYAL4Q2M3T9 481 aa7.38□□□□□ -1.23
BRCA1-221ENST00000493795 FAM122BQ7Z309 247 aa7.38□□□□□ -1.23
BRCA1-221ENST00000493795 FAM185AQ8N0U4 392 aa7.38□□□□□ -1.23
BRCA1-221ENST00000493795 RANBP9Q96S59 729 aa7.38□□□□□ -1.23
BRCA1-221ENST00000493795 C1orf198Q9H425 327 aa7.38□□□□□ -1.23
BRCA1-221ENST00000493795 LIN7CQ9NUP9 197 aaKnown RBP7.38□□□□□ -1.23
BRCA1-221ENST00000493795 CNIH4Q9P003 139 aa7.38□□□□□ -1.23
BRCA1-221ENST00000493795 RASD1Q9Y272 281 aa7.38□□□□□ -1.23
BRCA1-221ENST00000493795 SLC35A3Q9Y2D2 325 aa7.38□□□□□ -1.23
BRCA1-221ENST00000493795 ADH4P08319 380 aa7.38□□□□□ -1.23
BRCA1-221ENST00000493795 HSD17B1P14061 328 aa7.38□□□□□ -1.23
BRCA1-221ENST00000493795 ELK1P19419 428 aa7.38□□□□□ -1.23
BRCA1-221ENST00000493795 DTYMKP23919 212 aa7.38□□□□□ -1.23
BRCA1-221ENST00000493795 PDE7AQ13946 482 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms