RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 NADK2Q4G0N4 442 aa11.27□□□□□ -0.61
SNX17-208ENST00000493711 KRTCAP3Q53RY4 240 aa11.27□□□□□ -0.61
SNX17-208ENST00000493711 ARSKQ6UWY0 536 aa11.27□□□□□ -0.61
SNX17-208ENST00000493711 LACC1Q8IV20 430 aa11.27□□□□□ -0.61
SNX17-208ENST00000493711 OFCC1Q8IZS5 231 aa11.27□□□□□ -0.61
SNX17-208ENST00000493711 PIK3C3Q8NEB9 887 aa11.27□□□□□ -0.61
SNX17-208ENST00000493711 FAM83FQ8NEG4 500 aaPredicted RBP11.27□□□□□ -0.61
SNX17-208ENST00000493711 OR4D11Q8NGI4 311 aa11.27□□□□□ -0.61
SNX17-208ENST00000493711 SLC25A43Q8WUT9 341 aaPredicted RBP11.27□□□□□ -0.61
SNX17-208ENST00000493711 HS6ST2Q96MM7 605 aa11.27□□□□□ -0.61
SNX17-208ENST00000493711 AGPAT4Q9NRZ5 378 aa11.27□□□□□ -0.61
SNX17-208ENST00000493711 DNAJB9Q9UBS3 223 aa11.27□□□□□ -0.61
SNX17-208ENST00000493711 RIMS3Q9UJD0 308 aa11.27□□□□□ -0.61
SNX17-208ENST00000493711 ACAD8Q9UKU7 415 aa11.27□□□□□ -0.61
SNX17-208ENST00000493711 A0A1B0GWA3 101 aa11.26□□□□□ -0.61
SNX17-208ENST00000493711 A0A1W2PRQ8 180 aa11.26□□□□□ -0.61
SNX17-208ENST00000493711 ELOA3DA6NLF2 546 aaPredicted RBP11.26□□□□□ -0.61
SNX17-208ENST00000493711 CPSF4LA6NMK7 179 aaKnown RBP11.26□□□□□ -0.61
SNX17-208ENST00000493711 GJE1A6NN92 205 aa11.26□□□□□ -0.61
SNX17-208ENST00000493711 FAM166BA8MTA8 275 aa11.26□□□□□ -0.61
SNX17-208ENST00000493711 hCG_2039718K7EN88 272 aa11.26□□□□□ -0.61
SNX17-208ENST00000493711 GNGT2O14610 69 aa11.26□□□□□ -0.61
SNX17-208ENST00000493711 CHP2O43745 196 aa11.26□□□□□ -0.61
SNX17-208ENST00000493711 GMFGO60234 142 aa11.26□□□□□ -0.61
SNX17-208ENST00000493711 SUSD5O60279 629 aa11.26□□□□□ -0.61
SNX17-208ENST00000493711 ZIC3O60481 467 aa11.26□□□□□ -0.61
SNX17-208ENST00000493711 DEAF1O75398 565 aaPredicted RBP11.26□□□□□ -0.61
SNX17-208ENST00000493711 NTN1O95631 604 aa11.26□□□□□ -0.61
SNX17-208ENST00000493711 CST1P01037 141 aa11.26□□□□□ -0.61
SNX17-208ENST00000493711 IGHG3P01860 377 aa11.26□□□□□ -0.61
SNX17-208ENST00000493711 H1F0P07305 194 aaKnown RBP11.26□□□□□ -0.61
SNX17-208ENST00000493711 PLA2G2AP14555 144 aa11.26□□□□□ -0.61
SNX17-208ENST00000493711 FASP25445 335 aa11.26□□□□□ -0.61
SNX17-208ENST00000493711 HTR2AP28223 471 aa11.26□□□□□ -0.61
SNX17-208ENST00000493711 RBM34P42696 430 aaKnown RBP11.26□□□□□ -0.61
SNX17-208ENST00000493711 MAGEA5P43359 124 aa11.26□□□□□ -0.61
SNX17-208ENST00000493711 HOXC5Q00444 222 aa11.26□□□□□ -0.61
SNX17-208ENST00000493711 MERTKQ12866 999 aa11.26□□□□□ -0.61
SNX17-208ENST00000493711 DGCR6Q14129 220 aa11.26□□□□□ -0.61
SNX17-208ENST00000493711 TRAM2Q15035 370 aa11.26□□□□□ -0.61
SNX17-208ENST00000493711 TMEM44Q2T9K0 475 aa11.26□□□□□ -0.61
SNX17-208ENST00000493711 ELOA3BQ3SY89 546 aa11.26□□□□□ -0.61
SNX17-208ENST00000493711 ALG10BQ5I7T1 473 aa11.26□□□□□ -0.61
SNX17-208ENST00000493711 RAET1LQ5VY80 246 aa11.26□□□□□ -0.61
SNX17-208ENST00000493711 ZNF605Q86T29 641 aa11.26□□□□□ -0.61
SNX17-208ENST00000493711 RBM45Q8IUH3 476 aaKnown RBP11.26□□□□□ -0.61
SNX17-208ENST00000493711 LINC00471Q8N535 108 aa11.26□□□□□ -0.61
SNX17-208ENST00000493711 ELOA3Q8NG57 546 aa11.26□□□□□ -0.61
SNX17-208ENST00000493711 ADAMTS16Q8TE57 1224 aa11.26□□□□□ -0.61
SNX17-208ENST00000493711 SLC38A4Q969I6 547 aa11.26□□□□□ -0.61
SNX17-208ENST00000493711 C3orf49Q96BT1 292 aa11.26□□□□□ -0.61
SNX17-208ENST00000493711 SLC41A3Q96GZ6 507 aa11.26□□□□□ -0.61
SNX17-208ENST00000493711 SLC19A3Q9BZV2 496 aa11.26□□□□□ -0.61
SNX17-208ENST00000493711 VDAC3Q9Y277 283 aa11.26□□□□□ -0.61
SNX17-208ENST00000493711 C17orf51A8MQB3 221 aa11.25□□□□□ -0.61
SNX17-208ENST00000493711 CLOCKO15516 846 aa11.25□□□□□ -0.61
SNX17-208ENST00000493711 ZNF208O43345 1280 aa11.25□□□□□ -0.61
SNX17-208ENST00000493711 TPST2O60704 377 aa11.25□□□□□ -0.61
SNX17-208ENST00000493711 ADAM11O75078 769 aa11.25□□□□□ -0.61
SNX17-208ENST00000493711 ENTPD5O75356 428 aa11.25□□□□□ -0.61
SNX17-208ENST00000493711 ACTL6AO96019 429 aa11.25□□□□□ -0.61
SNX17-208ENST00000493711 LDLRP01130 860 aa11.25□□□□□ -0.61
SNX17-208ENST00000493711 TACR3P29371 465 aa11.25□□□□□ -0.61
SNX17-208ENST00000493711 RFC3P40938 356 aa11.25□□□□□ -0.61
SNX17-208ENST00000493711 ELF3P78545 371 aaPredicted RBP11.25□□□□□ -0.61
SNX17-208ENST00000493711 SELENBP1Q13228 472 aa11.25□□□□□ -0.61
SNX17-208ENST00000493711 PIN1Q13526 163 aaPredicted RBP11.25□□□□□ -0.61
SNX17-208ENST00000493711 TOMM34Q15785 309 aaPredicted RBP11.25□□□□□ -0.61
SNX17-208ENST00000493711 BCL2A1Q16548 175 aa11.25□□□□□ -0.61
SNX17-208ENST00000493711 IQCCQ4KMZ1 466 aa11.25□□□□□ -0.61
SNX17-208ENST00000493711 COLEC12Q5KU26 742 aa11.25□□□□□ -0.61
SNX17-208ENST00000493711 OR2T5Q6IEZ7 315 aa11.25□□□□□ -0.61
SNX17-208ENST00000493711 C3orf33Q6P1S2 294 aa11.25□□□□□ -0.61
SNX17-208ENST00000493711 ATG4DQ86TL0 474 aaPredicted RBP11.25□□□□□ -0.61
SNX17-208ENST00000493711 Q8NA96 180 aa11.25□□□□□ -0.61
SNX17-208ENST00000493711 OR2T29Q8NH02 315 aa11.25□□□□□ -0.61
SNX17-208ENST00000493711 NEIL3Q8TAT5 605 aa11.25□□□□□ -0.61
SNX17-208ENST00000493711 SLCO4A1Q96BD0 722 aa11.25□□□□□ -0.61
SNX17-208ENST00000493711 DDIT4LQ96D03 193 aa11.25□□□□□ -0.61
SNX17-208ENST00000493711 DHRS1Q96LJ7 313 aa11.25□□□□□ -0.61
SNX17-208ENST00000493711 SFXN2Q96NB2 322 aa11.25□□□□□ -0.61
SNX17-208ENST00000493711 TAAR6Q96RI8 345 aa11.25□□□□□ -0.61
SNX17-208ENST00000493711 EPYCQ99645 322 aa11.25□□□□□ -0.61
SNX17-208ENST00000493711 WFDC6Q9BQY6 131 aa11.25□□□□□ -0.61
SNX17-208ENST00000493711 TMEM43Q9BTV4 400 aa11.25□□□□□ -0.61
SNX17-208ENST00000493711 BDH2Q9BUT1 245 aa11.25□□□□□ -0.61
SNX17-208ENST00000493711 LDAHQ9H6V9 325 aa11.25□□□□□ -0.61
SNX17-208ENST00000493711 REEP1Q9H902 201 aa11.25□□□□□ -0.61
SNX17-208ENST00000493711 NMNAT1Q9HAN9 279 aaPredicted RBP11.25□□□□□ -0.61
SNX17-208ENST00000493711 S100A14Q9HCY8 104 aa11.25□□□□□ -0.61
SNX17-208ENST00000493711 KRCC1Q9NPI7 259 aaPredicted RBP11.25□□□□□ -0.61
SNX17-208ENST00000493711 OSGIN1Q9UJX0 560 aa11.25□□□□□ -0.61
SNX17-208ENST00000493711 TMCC3Q9ULS5 477 aa11.25□□□□□ -0.61
SNX17-208ENST00000493711 SLC7A7Q9UM01 511 aa11.25□□□□□ -0.61
SNX17-208ENST00000493711 A4GNTQ9UNA3 340 aa11.25□□□□□ -0.61
SNX17-208ENST00000493711 HRH3Q9Y5N1 445 aa11.25□□□□□ -0.61
SNX17-208ENST00000493711 AP4B1Q9Y6B7 739 aa11.25□□□□□ -0.61
SNX17-208ENST00000493711 CFAP46Q8IYW2 2715 aa11.24□□□□□ -0.61
SNX17-208ENST00000493711 A0A087WUJ7 227 aa11.24□□□□□ -0.61
SNX17-208ENST00000493711 TMED7-TICAM2A0A0A6YYA0 188 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms