RNA–Protein interactions for RNA: ENST00000493648.1

TOP3A-207, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 503 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-207ENST00000493648 RAC3P60763 192 aa6.25□□□□□ -1.41
TOP3A-207ENST00000493648 COPZ1P61923 177 aa6.25□□□□□ -1.41
TOP3A-207ENST00000493648 CSNK2A1P68400 391 aaPredicted RBP6.25□□□□□ -1.41
TOP3A-207ENST00000493648 SORDQ00796 357 aa6.25□□□□□ -1.41
TOP3A-207ENST00000493648 SNTB1Q13884 538 aaKnown RBP6.25□□□□□ -1.41
TOP3A-207ENST00000493648 CYLC2Q14093 348 aaPredicted RBP6.25□□□□□ -1.41
TOP3A-207ENST00000493648 RNPS1Q15287 305 aaKnown RBP6.25□□□□□ -1.41
TOP3A-207ENST00000493648 MAPK11Q15759 364 aa6.25□□□□□ -1.41
TOP3A-207ENST00000493648 MMEL1Q495T6 779 aa6.25□□□□□ -1.41
TOP3A-207ENST00000493648 RUNDC3AQ59EK9 446 aa6.25□□□□□ -1.41
TOP3A-207ENST00000493648 ZNF311Q5JNZ3 666 aa6.25□□□□□ -1.41
TOP3A-207ENST00000493648 TMEM201Q5SNT2 666 aa6.25□□□□□ -1.41
TOP3A-207ENST00000493648 GCNT6Q5T4J0 391 aa6.25□□□□□ -1.41
TOP3A-207ENST00000493648 MRPL2Q5T653 305 aaKnown RBP6.25□□□□□ -1.41
TOP3A-207ENST00000493648 REEP3Q6NUK4 255 aa6.25□□□□□ -1.41
TOP3A-207ENST00000493648 DLEU7Q6UYE1 221 aa6.25□□□□□ -1.41
TOP3A-207ENST00000493648 ZNF550Q7Z398 422 aa6.25□□□□□ -1.41
TOP3A-207ENST00000493648 GRINAQ7Z429 371 aa6.25□□□□□ -1.41
TOP3A-207ENST00000493648 BTLAQ7Z6A9 289 aa6.25□□□□□ -1.41
TOP3A-207ENST00000493648 VRK2Q86Y07 508 aa6.25□□□□□ -1.41
TOP3A-207ENST00000493648 KRT73Q86Y46 540 aa6.25□□□□□ -1.41
TOP3A-207ENST00000493648 SLC43A2Q8N370 569 aa6.25□□□□□ -1.41
TOP3A-207ENST00000493648 DPP10Q8N608 796 aa6.25□□□□□ -1.41
TOP3A-207ENST00000493648 ZNF610Q8N9Z0 462 aa6.25□□□□□ -1.41
TOP3A-207ENST00000493648 OR6K3Q8NGY3 331 aa6.25□□□□□ -1.41
TOP3A-207ENST00000493648 BBS10Q8TAM1 723 aa6.25□□□□□ -1.41
TOP3A-207ENST00000493648 FAM222BQ8WU58 562 aa6.25□□□□□ -1.41
TOP3A-207ENST00000493648 SLC25A43Q8WUT9 341 aaPredicted RBP6.25□□□□□ -1.41
TOP3A-207ENST00000493648 ROBO4Q8WZ75 1007 aa6.25□□□□□ -1.41
TOP3A-207ENST00000493648 ZNF524Q96C55 264 aa6.25□□□□□ -1.41
TOP3A-207ENST00000493648 OR5B2Q96R09 309 aa6.25□□□□□ -1.41
TOP3A-207ENST00000493648 SPATA5L1Q9BVQ7 753 aa6.25□□□□□ -1.41
TOP3A-207ENST00000493648 CCDC106Q9BWC9 280 aa6.25□□□□□ -1.41
TOP3A-207ENST00000493648 SPATA9Q9BWV2 254 aa6.25□□□□□ -1.41
TOP3A-207ENST00000493648 ZNF385DQ9H6B1 395 aa6.25□□□□□ -1.41
TOP3A-207ENST00000493648 CCDC134Q9H6E4 229 aa6.25□□□□□ -1.41
TOP3A-207ENST00000493648 BCL2L10Q9HD36 194 aa6.25□□□□□ -1.41
TOP3A-207ENST00000493648 CTPS2Q9NRF8 586 aa6.25□□□□□ -1.41
TOP3A-207ENST00000493648 PLSCR4Q9NRQ2 329 aa6.25□□□□□ -1.41
TOP3A-207ENST00000493648 RLIMQ9NVW2 624 aa6.25□□□□□ -1.41
TOP3A-207ENST00000493648 DNAJB12Q9NXW2 375 aaKnown RBP6.25□□□□□ -1.41
TOP3A-207ENST00000493648 GALNT8Q9NY28 637 aa6.25□□□□□ -1.41
TOP3A-207ENST00000493648 SLC25A37Q9NYZ2 338 aa6.25□□□□□ -1.41
TOP3A-207ENST00000493648 CRIM1Q9NZV1 1036 aa6.25□□□□□ -1.41
TOP3A-207ENST00000493648 VAPAQ9P0L0 249 aa6.25□□□□□ -1.41
TOP3A-207ENST00000493648 CHRNA9Q9UGM1 479 aa6.25□□□□□ -1.41
TOP3A-207ENST00000493648 NDRG3Q9UGV2 375 aa6.25□□□□□ -1.41
TOP3A-207ENST00000493648 DSPPQ9NZW4 1301 aa6.25□□□□□ -1.41
TOP3A-207ENST00000493648 TRBV5-3A0A0A0MS03 114 aa6.24□□□□□ -1.41
TOP3A-207ENST00000493648 A0A1W2PNR3 127 aa6.24□□□□□ -1.41
TOP3A-207ENST00000493648 SS18L1O75177 396 aaPredicted RBP6.24□□□□□ -1.41
TOP3A-207ENST00000493648 SERPINB7O75635 380 aa6.24□□□□□ -1.41
TOP3A-207ENST00000493648 CGAP01215 116 aa6.24□□□□□ -1.41
TOP3A-207ENST00000493648 YES1P07947 543 aa6.24□□□□□ -1.41
TOP3A-207ENST00000493648 ARAFP10398 606 aa6.24□□□□□ -1.41
TOP3A-207ENST00000493648 EPXP11678 715 aa6.24□□□□□ -1.41
TOP3A-207ENST00000493648 POU2F1P14859 743 aa6.24□□□□□ -1.41
TOP3A-207ENST00000493648 CD1EP15812 388 aa6.24□□□□□ -1.41
TOP3A-207ENST00000493648 CCNA2P20248 432 aa6.24□□□□□ -1.41
TOP3A-207ENST00000493648 ENPP1P22413 925 aa6.24□□□□□ -1.41
TOP3A-207ENST00000493648 CXCR1P25024 350 aa6.24□□□□□ -1.41
TOP3A-207ENST00000493648 TACR3P29371 465 aa6.24□□□□□ -1.41
TOP3A-207ENST00000493648 ADSLP30566 484 aaPredicted RBP6.24□□□□□ -1.41
TOP3A-207ENST00000493648 CPOXP36551 454 aa6.24□□□□□ -1.41
TOP3A-207ENST00000493648 CD79BP40259 229 aa6.24□□□□□ -1.41
TOP3A-207ENST00000493648 ACAA2P42765 397 aaKnown RBP6.24□□□□□ -1.41
TOP3A-207ENST00000493648 SLC1A3P43003 542 aa6.24□□□□□ -1.41
TOP3A-207ENST00000493648 POLR2HP52434 150 aaKnown RBP6.24□□□□□ -1.41
TOP3A-207ENST00000493648 CDK6Q00534 326 aa6.24□□□□□ -1.41
TOP3A-207ENST00000493648 SF3A3Q12874 501 aaKnown RBP eCLIP6.24□□□□□ -1.41
TOP3A-207ENST00000493648 EPS8Q12929 822 aa6.24□□□□□ -1.41
TOP3A-207ENST00000493648 NFYCQ13952 458 aa6.24□□□□□ -1.41
TOP3A-207ENST00000493648 DAZAP2Q15038 168 aaPredicted RBP6.24□□□□□ -1.41
TOP3A-207ENST00000493648 GUSBP1Q15486 140 aa6.24□□□□□ -1.41
TOP3A-207ENST00000493648 MAPRE2Q15555 327 aa6.24□□□□□ -1.41
TOP3A-207ENST00000493648 ZNF239Q16600 458 aaKnown RBP6.24□□□□□ -1.41
TOP3A-207ENST00000493648 SYT14P1Q58G82 188 aa6.24□□□□□ -1.41
TOP3A-207ENST00000493648 RPS26P11Q5JNZ5 115 aaPredicted RBP6.24□□□□□ -1.41
TOP3A-207ENST00000493648 RNF220Q5VTB9 566 aa6.24□□□□□ -1.41
TOP3A-207ENST00000493648 DMRTA1Q5VZB9 504 aa6.24□□□□□ -1.41
TOP3A-207ENST00000493648 WBP2NLQ6ICG8 309 aa6.24□□□□□ -1.41
TOP3A-207ENST00000493648 VWA1Q6PCB0 445 aa6.24□□□□□ -1.41
TOP3A-207ENST00000493648 ZNF836Q6ZNA1 936 aa6.24□□□□□ -1.41
TOP3A-207ENST00000493648 TMPPEQ6ZT21 453 aa6.24□□□□□ -1.41
TOP3A-207ENST00000493648 BEND4Q6ZU67 534 aa6.24□□□□□ -1.41
TOP3A-207ENST00000493648 FCRLAQ7L513 359 aa6.24□□□□□ -1.41
TOP3A-207ENST00000493648 DHDDSQ86SQ9 333 aa6.24□□□□□ -1.41
TOP3A-207ENST00000493648 STK32CQ86UX6 486 aa6.24□□□□□ -1.41
TOP3A-207ENST00000493648 TMEM200AQ86VY9 491 aa6.24□□□□□ -1.41
TOP3A-207ENST00000493648 ADGRG3Q86Y34 549 aa6.24□□□□□ -1.41
TOP3A-207ENST00000493648 MSRB3Q8IXL7 192 aa6.24□□□□□ -1.41
TOP3A-207ENST00000493648 ZZZ3Q8IYH5 903 aa6.24□□□□□ -1.41
TOP3A-207ENST00000493648 CLIP4Q8N3C7 705 aa6.24□□□□□ -1.41
TOP3A-207ENST00000493648 NFKBIDQ8NI38 313 aa6.24□□□□□ -1.41
TOP3A-207ENST00000493648 LINC01560Q8TB33 94 aa6.24□□□□□ -1.41
TOP3A-207ENST00000493648 MAL2Q969L2 176 aa6.24□□□□□ -1.41
TOP3A-207ENST00000493648 SLC35B4Q969S0 331 aa6.24□□□□□ -1.41
TOP3A-207ENST00000493648 DDIT4LQ96D03 193 aa6.24□□□□□ -1.41
TOP3A-207ENST00000493648 ZHX1-C8orf76Q96EF9 292 aa6.24□□□□□ -1.41
TOP3A-207ENST00000493648 LURAP1Q96LR2 239 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms