RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 FAM32AQ9Y421 112 aaKnown RBP15.56■□□□□ 0.08
LIME1-208ENST00000493265 HEATR5AQ86XA9 2040 aa15.55■□□□□ 0.08
LIME1-208ENST00000493265 TRGV5A0A0B4J1U4 118 aa15.55■□□□□ 0.08
LIME1-208ENST00000493265 OR2M5A3KFT3 312 aa15.55■□□□□ 0.08
LIME1-208ENST00000493265 H3BML4 177 aa15.55■□□□□ 0.08
LIME1-208ENST00000493265 ZNHIT1O43257 154 aa15.55■□□□□ 0.08
LIME1-208ENST00000493265 GPIP06744 558 aa15.55■□□□□ 0.08
LIME1-208ENST00000493265 UMPSP11172 480 aa15.55■□□□□ 0.08
LIME1-208ENST00000493265 TACR3P29371 465 aa15.55■□□□□ 0.08
LIME1-208ENST00000493265 SLC1A3P43003 542 aa15.55■□□□□ 0.08
LIME1-208ENST00000493265 ACTR3P61158 418 aa15.55■□□□□ 0.08
LIME1-208ENST00000493265 HSF1Q00613 529 aa15.55■□□□□ 0.08
LIME1-208ENST00000493265 CYP4Z1Q86W10 505 aa15.55■□□□□ 0.08
LIME1-208ENST00000493265 SIAH3Q8IW03 269 aa15.55■□□□□ 0.08
LIME1-208ENST00000493265 ADAMTS16Q8TE57 1224 aa15.55■□□□□ 0.08
LIME1-208ENST00000493265 SMPDL3BQ92485 455 aa15.55■□□□□ 0.08
LIME1-208ENST00000493265 C7orf34Q96L11 122 aa15.55■□□□□ 0.08
LIME1-208ENST00000493265 PIGQQ9BRB3 760 aa15.55■□□□□ 0.08
LIME1-208ENST00000493265 TMEM185BQ9H7F4 350 aa15.55■□□□□ 0.08
LIME1-208ENST00000493265 ZDHHC11Q9H8X9 412 aa15.55■□□□□ 0.08
LIME1-208ENST00000493265 QPCTLQ9NXS2 382 aa15.55■□□□□ 0.08
LIME1-208ENST00000493265 NDUFAF4Q9P032 175 aa15.55■□□□□ 0.08
LIME1-208ENST00000493265 TNFRSF10DQ9UBN6 386 aa15.55■□□□□ 0.08
LIME1-208ENST00000493265 ENPP4Q9Y6X5 453 aa15.55■□□□□ 0.08
LIME1-208ENST00000493265 FAAHO00519 579 aa15.54■□□□□ 0.08
LIME1-208ENST00000493265 FMO6PO60774 539 aa15.54■□□□□ 0.08
LIME1-208ENST00000493265 SEMA7AO75326 666 aa15.54■□□□□ 0.08
LIME1-208ENST00000493265 ENTPD5O75356 428 aa15.54■□□□□ 0.08
LIME1-208ENST00000493265 RAP2AP10114 183 aa15.54■□□□□ 0.08
LIME1-208ENST00000493265 PEPDP12955 493 aa15.54■□□□□ 0.08
LIME1-208ENST00000493265 IL11P20809 199 aa15.54■□□□□ 0.08
LIME1-208ENST00000493265 CXCR1P25024 350 aa15.54■□□□□ 0.08
LIME1-208ENST00000493265 GCKP35557 465 aa15.54■□□□□ 0.08
LIME1-208ENST00000493265 STARP49675 285 aa15.54■□□□□ 0.08
LIME1-208ENST00000493265 POLR2HP52434 150 aaKnown RBP15.54■□□□□ 0.08
LIME1-208ENST00000493265 CDH12P55289 794 aa15.54■□□□□ 0.08
LIME1-208ENST00000493265 ALG10BQ5I7T1 473 aa15.54■□□□□ 0.08
LIME1-208ENST00000493265 GRINAQ7Z429 371 aa15.54■□□□□ 0.08
LIME1-208ENST00000493265 TSEN54Q7Z6J9 526 aaKnown RBP15.54■□□□□ 0.08
LIME1-208ENST00000493265 GTPBP8Q8N3Z3 284 aaPredicted RBP15.54■□□□□ 0.08
LIME1-208ENST00000493265 FAR1Q8WVX9 515 aa15.54■□□□□ 0.08
LIME1-208ENST00000493265 NR4A3Q92570 626 aa15.54■□□□□ 0.08
LIME1-208ENST00000493265 POP5Q969H6 163 aaKnown RBP15.54■□□□□ 0.08
LIME1-208ENST00000493265 C3orf49Q96BT1 292 aa15.54■□□□□ 0.08
LIME1-208ENST00000493265 DNAJA3Q96EY1 480 aa15.54■□□□□ 0.08
LIME1-208ENST00000493265 SLC41A3Q96GZ6 507 aa15.54■□□□□ 0.08
LIME1-208ENST00000493265 MRGPRX4Q96LA9 322 aa15.54■□□□□ 0.08
LIME1-208ENST00000493265 ZNF300Q96RE9 604 aaPredicted RBP15.54■□□□□ 0.08
LIME1-208ENST00000493265 FNDC11Q9BVV2 318 aa15.54■□□□□ 0.08
LIME1-208ENST00000493265 CHID1Q9BWS9 393 aa15.54■□□□□ 0.08
LIME1-208ENST00000493265 MAGIXQ9H6Y5 334 aa15.54■□□□□ 0.08
LIME1-208ENST00000493265 IL1RAPQ9NPH3 570 aa15.54■□□□□ 0.08
LIME1-208ENST00000493265 AGPAT4Q9NRZ5 378 aa15.54■□□□□ 0.08
LIME1-208ENST00000493265 RIMS3Q9UJD0 308 aa15.54■□□□□ 0.08
LIME1-208ENST00000493265 SLC7A7Q9UM01 511 aa15.54■□□□□ 0.08
LIME1-208ENST00000493265 MRPS18CQ9Y3D5 142 aaKnown RBP15.54■□□□□ 0.08
LIME1-208ENST00000493265 ZNF337Q9Y3M9 751 aa15.54■□□□□ 0.08
LIME1-208ENST00000493265 TESMINQ9Y4I5 508 aa15.54■□□□□ 0.08
LIME1-208ENST00000493265 TMED7-TICAM2A0A0A6YYA0 188 aa15.53■□□□□ 0.08
LIME1-208ENST00000493265 TRAPPC13A5PLN9 417 aa15.53■□□□□ 0.08
LIME1-208ENST00000493265 ELOA3DA6NLF2 546 aaPredicted RBP15.53■□□□□ 0.08
LIME1-208ENST00000493265 FKBP6O75344 327 aa15.53■□□□□ 0.08
LIME1-208ENST00000493265 AGFG2O95081 481 aa15.53■□□□□ 0.08
LIME1-208ENST00000493265 NTN1O95631 604 aa15.53■□□□□ 0.08
LIME1-208ENST00000493265 ITGA2P17301 1181 aa15.53■□□□□ 0.08
LIME1-208ENST00000493265 GNLYP22749 145 aa15.53■□□□□ 0.08
LIME1-208ENST00000493265 EIF1P41567 113 aaKnown RBP15.53■□□□□ 0.08
LIME1-208ENST00000493265 B3GALT5-AS1P59052 145 aa15.53■□□□□ 0.08
LIME1-208ENST00000493265 ELOA3BQ3SY89 546 aa15.53■□□□□ 0.08
LIME1-208ENST00000493265 GLYR1Q49A26 553 aaPredicted RBP15.53■□□□□ 0.08
LIME1-208ENST00000493265 ULK3Q6PHR2 472 aa15.53■□□□□ 0.08
LIME1-208ENST00000493265 TRILQ7L0X0 811 aa15.53■□□□□ 0.08
LIME1-208ENST00000493265 GDF7Q7Z4P5 450 aa15.53■□□□□ 0.08
LIME1-208ENST00000493265 LSMEM1Q8N8F7 131 aa15.53■□□□□ 0.08
LIME1-208ENST00000493265 ELOA3Q8NG57 546 aa15.53■□□□□ 0.08
LIME1-208ENST00000493265 NEIL3Q8TAT5 605 aa15.53■□□□□ 0.08
LIME1-208ENST00000493265 PHF10Q8WUB8 498 aaKnown RBP15.53■□□□□ 0.08
LIME1-208ENST00000493265 PYDC1Q8WXC3 89 aa15.53■□□□□ 0.08
LIME1-208ENST00000493265 SLCO4A1Q96BD0 722 aa15.53■□□□□ 0.08
LIME1-208ENST00000493265 PRRC1Q96M27 445 aa15.53■□□□□ 0.08
LIME1-208ENST00000493265 ACKR4Q9NPB9 350 aa15.53■□□□□ 0.08
LIME1-208ENST00000493265 OSGIN1Q9UJX0 560 aa15.53■□□□□ 0.08
LIME1-208ENST00000493265 A4GNTQ9UNA3 340 aa15.53■□□□□ 0.08
LIME1-208ENST00000493265 TMED7Q9Y3B3 224 aa15.53■□□□□ 0.08
LIME1-208ENST00000493265 RP1L1Q8IWN7 2480 aaPredicted RBP15.52■□□□□ 0.08
LIME1-208ENST00000493265 A0A0B4J2E0 115 aa15.52■□□□□ 0.08
LIME1-208ENST00000493265 A0A1B0GTH9 108 aa15.52■□□□□ 0.08
LIME1-208ENST00000493265 A0A1B0GX12 115 aa15.52■□□□□ 0.08
LIME1-208ENST00000493265 FFAR1O14842 300 aa15.52■□□□□ 0.08
LIME1-208ENST00000493265 TIPRLO75663 272 aa15.52■□□□□ 0.08
LIME1-208ENST00000493265 OR5F1O95221 314 aa15.52■□□□□ 0.08
LIME1-208ENST00000493265 THY1P04216 161 aa15.52■□□□□ 0.08
LIME1-208ENST00000493265 TFPIP10646 304 aa15.52■□□□□ 0.08
LIME1-208ENST00000493265 RHCEP18577 417 aa15.52■□□□□ 0.08
LIME1-208ENST00000493265 POU3F2P20265 443 aaPredicted RBP15.52■□□□□ 0.08
LIME1-208ENST00000493265 FUT4P22083 530 aa15.52■□□□□ 0.08
LIME1-208ENST00000493265 IFNA8P32881 189 aa15.52■□□□□ 0.08
LIME1-208ENST00000493265 SFTPDP35247 375 aa15.52■□□□□ 0.08
LIME1-208ENST00000493265 APOBEC1P41238 236 aaKnown RBP15.52■□□□□ 0.08
LIME1-208ENST00000493265 HTR3AP46098 478 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms