RNA–Protein interactions for RNA: ENST00000493006.1

PLD3-215, Transcript of phospholipase D family member 3, humanhuman

TSL 2

Gene PLD3, Length 694 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLD3-215ENST00000493006 NUFIP2Q7Z417 695 aaKnown RBP16.31■□□□□ 0.2
PLD3-215ENST00000493006 CMIPQ8IY22 773 aa16.31■□□□□ 0.2
PLD3-215ENST00000493006 SLC25A43Q8WUT9 341 aaPredicted RBP16.31■□□□□ 0.2
PLD3-215ENST00000493006 WDR60Q8WVS4 1066 aa16.31■□□□□ 0.2
PLD3-215ENST00000493006 VPS33AQ96AX1 596 aa16.31■□□□□ 0.2
PLD3-215ENST00000493006 ITCHQ96J02 903 aa16.31■□□□□ 0.2
PLD3-215ENST00000493006 CCDC106Q9BWC9 280 aa16.31■□□□□ 0.2
PLD3-215ENST00000493006 MTHFD2LQ9H903 347 aaPredicted RBP16.31■□□□□ 0.2
PLD3-215ENST00000493006 CTPS2Q9NRF8 586 aa16.31■□□□□ 0.2
PLD3-215ENST00000493006 KLHL9Q9P2J3 617 aa16.31■□□□□ 0.2
PLD3-215ENST00000493006 SPIN1Q9Y657 262 aaPredicted RBP16.31■□□□□ 0.2
PLD3-215ENST00000493006 FAM234BA2RU67 622 aa16.3■□□□□ 0.2
PLD3-215ENST00000493006 SMAD9O15198 467 aaKnown RBP16.3■□□□□ 0.2
PLD3-215ENST00000493006 POLR3GO15318 223 aaPredicted RBP16.3■□□□□ 0.2
PLD3-215ENST00000493006 ADAM11O75078 769 aa16.3■□□□□ 0.2
PLD3-215ENST00000493006 THBDP07204 575 aa16.3■□□□□ 0.2
PLD3-215ENST00000493006 YES1P07947 543 aa16.3■□□□□ 0.2
PLD3-215ENST00000493006 ETFAP13804 333 aa16.3■□□□□ 0.2
PLD3-215ENST00000493006 KLK2P20151 261 aa16.3■□□□□ 0.2
PLD3-215ENST00000493006 APOBEC1P41238 236 aaKnown RBP16.3■□□□□ 0.2
PLD3-215ENST00000493006 DIO1P49895 249 aa16.3■□□□□ 0.2
PLD3-215ENST00000493006 DEFB113Q30KQ7 82 aa16.3■□□□□ 0.2
PLD3-215ENST00000493006 C6orf10Q5SRN2 563 aa16.3■□□□□ 0.2
PLD3-215ENST00000493006 GRINAQ7Z429 371 aa16.3■□□□□ 0.2
PLD3-215ENST00000493006 AURKBQ96GD4 344 aaPredicted RBP16.3■□□□□ 0.2
PLD3-215ENST00000493006 PSD2Q9BQI7 771 aa16.3■□□□□ 0.2
PLD3-215ENST00000493006 TACO1Q9BSH4 297 aaKnown RBP16.3■□□□□ 0.2
PLD3-215ENST00000493006 TPT1P8Q9HAU6 139 aa16.3■□□□□ 0.2
PLD3-215ENST00000493006 TCF7L2Q9NQB0 619 aa16.3■□□□□ 0.2
PLD3-215ENST00000493006 P2RX2Q9UBL9 471 aa16.3■□□□□ 0.2
PLD3-215ENST00000493006 CHRNA9Q9UGM1 479 aa16.3■□□□□ 0.2
PLD3-215ENST00000493006 AP3D1O14617 1153 aa16.29■□□□□ 0.2
PLD3-215ENST00000493006 CYTIPO60759 359 aa16.29■□□□□ 0.2
PLD3-215ENST00000493006 TGDSO95455 350 aa16.29■□□□□ 0.2
PLD3-215ENST00000493006 DBIP07108 87 aaKnown RBP16.29■□□□□ 0.2
PLD3-215ENST00000493006 FESP07332 822 aa16.29■□□□□ 0.2
PLD3-215ENST00000493006 TFPIP10646 304 aa16.29■□□□□ 0.2
PLD3-215ENST00000493006 IL7RP16871 459 aa16.29■□□□□ 0.2
PLD3-215ENST00000493006 PSMB1P20618 241 aaKnown RBP16.29■□□□□ 0.2
PLD3-215ENST00000493006 CRATP43155 626 aa16.29■□□□□ 0.2
PLD3-215ENST00000493006 IDH2P48735 452 aaKnown RBP16.29■□□□□ 0.2
PLD3-215ENST00000493006 STX1BP61266 288 aa16.29■□□□□ 0.2
PLD3-215ENST00000493006 CSNK2A1P68400 391 aaPredicted RBP16.29■□□□□ 0.2
PLD3-215ENST00000493006 GNA13Q14344 377 aa16.29■□□□□ 0.2
PLD3-215ENST00000493006 MAPK11Q15759 364 aa16.29■□□□□ 0.2
PLD3-215ENST00000493006 MRPL2Q5T653 305 aaKnown RBP16.29■□□□□ 0.2
PLD3-215ENST00000493006 TMPPEQ6ZT21 453 aa16.29■□□□□ 0.2
PLD3-215ENST00000493006 DYDC1Q8WWB3 177 aa16.29■□□□□ 0.2
PLD3-215ENST00000493006 PMM1Q92871 262 aa16.29■□□□□ 0.2
PLD3-215ENST00000493006 HS3ST6Q96QI5 342 aa16.29■□□□□ 0.2
PLD3-215ENST00000493006 ACTR6Q9GZN1 396 aa16.29■□□□□ 0.2
PLD3-215ENST00000493006 BCO1Q9HAY6 547 aa16.29■□□□□ 0.2
PLD3-215ENST00000493006 ING1Q9UK53 422 aaPredicted RBP16.29■□□□□ 0.2
PLD3-215ENST00000493006 DSPPQ9NZW4 1301 aa16.28■□□□□ 0.2
PLD3-215ENST00000493006 SULT2B1O00204 365 aa16.28■□□□□ 0.2
PLD3-215ENST00000493006 GCM2O75603 506 aaPredicted RBP16.28■□□□□ 0.2
PLD3-215ENST00000493006 BCHEP06276 602 aa16.28■□□□□ 0.2
PLD3-215ENST00000493006 CD53P19397 219 aa16.28■□□□□ 0.2
PLD3-215ENST00000493006 LOXP28300 417 aaPredicted RBP16.28■□□□□ 0.2
PLD3-215ENST00000493006 MRPL19P49406 292 aaKnown RBP16.28■□□□□ 0.2
PLD3-215ENST00000493006 IDH3AP50213 366 aa16.28■□□□□ 0.2
PLD3-215ENST00000493006 DSTNP60981 165 aa16.28■□□□□ 0.2
PLD3-215ENST00000493006 RASGEF1BQ0VAM2 473 aa16.28■□□□□ 0.2
PLD3-215ENST00000493006 CXorf67Q86X51 503 aaPredicted RBP16.28■□□□□ 0.2
PLD3-215ENST00000493006 PEX5LQ8IYB4 626 aa16.28■□□□□ 0.2
PLD3-215ENST00000493006 GABRG1Q8N1C3 465 aa16.28■□□□□ 0.2
PLD3-215ENST00000493006 GTF2H4Q92759 462 aa16.28■□□□□ 0.2
PLD3-215ENST00000493006 EBF4Q9BQW3 602 aa16.28■□□□□ 0.2
PLD3-215ENST00000493006 OR10A4Q9H209 315 aa16.28■□□□□ 0.2
PLD3-215ENST00000493006 CALML5Q9NZT1 146 aa16.28■□□□□ 0.2
PLD3-215ENST00000493006 GPR52Q9Y2T5 361 aa16.28■□□□□ 0.2
PLD3-215ENST00000493006 FREM1Q5H8C1 2179 aa16.27■□□□□ 0.2
PLD3-215ENST00000493006 MAP1AP78559 2803 aaPredicted RBP16.27■□□□□ 0.2
PLD3-215ENST00000493006 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.27■□□□□ 0.2
PLD3-215ENST00000493006 HMGB1P1B2RPK0 211 aaPredicted RBP16.27■□□□□ 0.2
PLD3-215ENST00000493006 HTR3AP46098 478 aa16.27■□□□□ 0.2
PLD3-215ENST00000493006 CRISP3P54108 245 aa16.27■□□□□ 0.2
PLD3-215ENST00000493006 BEX5Q5H9J7 111 aa16.27■□□□□ 0.2
PLD3-215ENST00000493006 SLC2A7Q6PXP3 512 aa16.27■□□□□ 0.2
PLD3-215ENST00000493006 HDXQ7Z353 690 aa16.27■□□□□ 0.2
PLD3-215ENST00000493006 ADGRG3Q86Y34 549 aa16.27■□□□□ 0.2
PLD3-215ENST00000493006 TGIF2LYQ8IUE0 185 aa16.27■□□□□ 0.2
PLD3-215ENST00000493006 GOLGA6L1Q8N7Z2 621 aa16.27■□□□□ 0.2
PLD3-215ENST00000493006 STEAP2Q8NFT2 490 aa16.27■□□□□ 0.2
PLD3-215ENST00000493006 DNAJA3Q96EY1 480 aa16.27■□□□□ 0.2
PLD3-215ENST00000493006 ARL5BQ96KC2 179 aa16.27■□□□□ 0.2
PLD3-215ENST00000493006 ZNF300Q96RE9 604 aaPredicted RBP16.27■□□□□ 0.2
PLD3-215ENST00000493006 CCDC28BQ9BUN5 200 aa16.27■□□□□ 0.2
PLD3-215ENST00000493006 OR11A1Q9GZK7 315 aa16.27■□□□□ 0.2
PLD3-215ENST00000493006 PAIP1Q9H074 479 aaKnown RBP16.27■□□□□ 0.2
PLD3-215ENST00000493006 UBTD1Q9HAC8 227 aa16.27■□□□□ 0.2
PLD3-215ENST00000493006 HDGFL3Q9Y3E1 203 aa16.27■□□□□ 0.2
PLD3-215ENST00000493006 CFAP73A6NFT4 308 aa16.26■□□□□ 0.19
PLD3-215ENST00000493006 ZNF724A8MTY0 619 aa16.26■□□□□ 0.19
PLD3-215ENST00000493006 FAAHO00519 579 aa16.26■□□□□ 0.19
PLD3-215ENST00000493006 KLF4O43474 513 aa16.26■□□□□ 0.19
PLD3-215ENST00000493006 TFPTP0C1Z6 253 aa16.26■□□□□ 0.19
PLD3-215ENST00000493006 CCNA2P20248 432 aa16.26■□□□□ 0.19
PLD3-215ENST00000493006 FKBP2P26885 142 aaKnown RBP16.26■□□□□ 0.19
PLD3-215ENST00000493006 OR3A2P47893 321 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms