RNA–Protein interactions for RNA: ENST00000492772.1

SND1-215, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-215ENST00000492772 CLHC1Q8NHS4 586 aa9.66□□□□□ -0.86
SND1-215ENST00000492772 PIGXQ8TBF5 258 aa9.66□□□□□ -0.86
SND1-215ENST00000492772 TMEM234Q8WY98 164 aa9.66□□□□□ -0.86
SND1-215ENST00000492772 IFT81Q8WYA0 676 aa9.66□□□□□ -0.86
SND1-215ENST00000492772 MOAP1Q96BY2 351 aa9.66□□□□□ -0.86
SND1-215ENST00000492772 MSI2Q96DH6 328 aaKnown RBP9.66□□□□□ -0.86
SND1-215ENST00000492772 MUS81Q96NY9 551 aa9.66□□□□□ -0.86
SND1-215ENST00000492772 PRR14Q9BWN1 585 aa9.66□□□□□ -0.86
SND1-215ENST00000492772 EML4Q9HC35 981 aaKnown RBP9.66□□□□□ -0.86
SND1-215ENST00000492772 DCDC2Q9UHG0 476 aa9.66□□□□□ -0.86
SND1-215ENST00000492772 TRAF6Q9Y4K3 522 aa9.66□□□□□ -0.86
SND1-215ENST00000492772 PTGDR2Q9Y5Y4 395 aa9.66□□□□□ -0.86
SND1-215ENST00000492772 A0A1W2PR80 420 aa9.65□□□□□ -0.86
SND1-215ENST00000492772 SERINC4A6NH21 518 aa9.65□□□□□ -0.86
SND1-215ENST00000492772 ZNF716A6NP11 495 aa9.65□□□□□ -0.86
SND1-215ENST00000492772 ESPNB1AK53 854 aa9.65□□□□□ -0.86
SND1-215ENST00000492772 SCAMP2O15127 329 aaKnown RBP9.65□□□□□ -0.86
SND1-215ENST00000492772 DNPH1O43598 174 aa9.65□□□□□ -0.86
SND1-215ENST00000492772 TCF21O43680 179 aa9.65□□□□□ -0.86
SND1-215ENST00000492772 KIAA0513O60268 411 aa9.65□□□□□ -0.86
SND1-215ENST00000492772 DNAJA2O60884 412 aa9.65□□□□□ -0.86
SND1-215ENST00000492772 GLRA3O75311 464 aa9.65□□□□□ -0.86
SND1-215ENST00000492772 MRPL33O75394 65 aaKnown RBP9.65□□□□□ -0.86
SND1-215ENST00000492772 LY6HO94772 140 aa9.65□□□□□ -0.86
SND1-215ENST00000492772 CHEK2O96017 543 aa9.65□□□□□ -0.86
SND1-215ENST00000492772 PGCP20142 388 aa9.65□□□□□ -0.86
SND1-215ENST00000492772 EFNA1P20827 205 aaPredicted RBP9.65□□□□□ -0.86
SND1-215ENST00000492772 ECHS1P30084 290 aa9.65□□□□□ -0.86
SND1-215ENST00000492772 SLC16A1P53985 500 aa9.65□□□□□ -0.86
SND1-215ENST00000492772 DNAJB13P59910 316 aa9.65□□□□□ -0.86
SND1-215ENST00000492772 SNRPD2P62316 118 aaKnown RBP9.65□□□□□ -0.86
SND1-215ENST00000492772 MERTKQ12866 999 aa9.65□□□□□ -0.86
SND1-215ENST00000492772 SKP2Q13309 424 aa9.65□□□□□ -0.86
SND1-215ENST00000492772 SPDYE7PQ495Y7 208 aa9.65□□□□□ -0.86
SND1-215ENST00000492772 CLEC6AQ6EIG7 209 aa9.65□□□□□ -0.86
SND1-215ENST00000492772 SYT10Q6XYQ8 523 aa9.65□□□□□ -0.86
SND1-215ENST00000492772 HOMEZQ8IX15 550 aa9.65□□□□□ -0.86
SND1-215ENST00000492772 OR2T11Q8NH01 316 aa9.65□□□□□ -0.86
SND1-215ENST00000492772 PSMA8Q8TAA3 256 aa9.65□□□□□ -0.86
SND1-215ENST00000492772 SFXN5Q8TD22 340 aa9.65□□□□□ -0.86
SND1-215ENST00000492772 ZNF524Q96C55 264 aa9.65□□□□□ -0.86
SND1-215ENST00000492772 NMUR2Q9GZQ4 415 aa9.65□□□□□ -0.86
SND1-215ENST00000492772 LAT2Q9GZY6 243 aa9.65□□□□□ -0.86
SND1-215ENST00000492772 QRSL1Q9H0R6 528 aaKnown RBP9.65□□□□□ -0.86
SND1-215ENST00000492772 TNFRSF12AQ9NP84 129 aa9.65□□□□□ -0.86
SND1-215ENST00000492772 GPATCH2Q9NW75 528 aa9.65□□□□□ -0.86
SND1-215ENST00000492772 PSMC3IPQ9P2W1 217 aaPredicted RBP9.65□□□□□ -0.86
SND1-215ENST00000492772 BAIAP2L1Q9UHR4 511 aa9.65□□□□□ -0.86
SND1-215ENST00000492772 ATP6V1HQ9UI12 483 aa9.65□□□□□ -0.86
SND1-215ENST00000492772 DCTN4Q9UJW0 460 aa9.65□□□□□ -0.86
SND1-215ENST00000492772 EMCNQ9ULC0 261 aa9.65□□□□□ -0.86
SND1-215ENST00000492772 LOC390937A0A1W2PQ73 354 aa9.64□□□□□ -0.87
SND1-215ENST00000492772 TMEM114B3SHH9 223 aa9.64□□□□□ -0.87
SND1-215ENST00000492772 ATP6V1G2-DDX39BF2Z307 99 aa9.64□□□□□ -0.87
SND1-215ENST00000492772 AZIN1O14977 448 aa9.64□□□□□ -0.87
SND1-215ENST00000492772 ANKRD28O15084 1053 aa9.64□□□□□ -0.87
SND1-215ENST00000492772 LSM1O15116 133 aaKnown RBP9.64□□□□□ -0.87
SND1-215ENST00000492772 PMS2P2O95744 297 aa9.64□□□□□ -0.87
SND1-215ENST00000492772 AK1P00568 194 aa9.64□□□□□ -0.87
SND1-215ENST00000492772 PROCP04070 461 aa9.64□□□□□ -0.87
SND1-215ENST00000492772 ITGA5P08648 1049 aa9.64□□□□□ -0.87
SND1-215ENST00000492772 ZNF23P17027 643 aa9.64□□□□□ -0.87
SND1-215ENST00000492772 MAPK1P28482 360 aa9.64□□□□□ -0.87
SND1-215ENST00000492772 CCT3P49368 545 aaKnown RBP9.64□□□□□ -0.87
SND1-215ENST00000492772 SESN3P58005 492 aa9.64□□□□□ -0.87
SND1-215ENST00000492772 TGFBR3Q03167 851 aa9.64□□□□□ -0.87
SND1-215ENST00000492772 RUNX1T1Q06455 604 aa9.64□□□□□ -0.87
SND1-215ENST00000492772 SWI5Q1ZZU3 235 aa9.64□□□□□ -0.87
SND1-215ENST00000492772 CCDC153Q494R4 210 aa9.64□□□□□ -0.87
SND1-215ENST00000492772 RFTN2Q52LD8 501 aaPredicted RBP9.64□□□□□ -0.87
SND1-215ENST00000492772 PDZK1Q5T2W1 519 aa9.64□□□□□ -0.87
SND1-215ENST00000492772 CASP12Q6UXS9 341 aa9.64□□□□□ -0.87
SND1-215ENST00000492772 MEX3DQ86XN8 651 aaKnown RBP9.64□□□□□ -0.87
SND1-215ENST00000492772 NATD1Q8N6N6 113 aa9.64□□□□□ -0.87
SND1-215ENST00000492772 ZNF540Q8NDQ6 660 aa9.64□□□□□ -0.87
SND1-215ENST00000492772 OR5P2Q8WZ92 322 aa9.64□□□□□ -0.87
SND1-215ENST00000492772 C3orf49Q96BT1 292 aa9.64□□□□□ -0.87
SND1-215ENST00000492772 FBXO17Q96EF6 278 aa9.64□□□□□ -0.87
SND1-215ENST00000492772 SORCS2Q96PQ0 1159 aa9.64□□□□□ -0.87
SND1-215ENST00000492772 THUMPD3Q9BV44 507 aaKnown RBP9.64□□□□□ -0.87
SND1-215ENST00000492772 SLC17A5Q9NRA2 495 aa9.64□□□□□ -0.87
SND1-215ENST00000492772 ACER3Q9NUN7 267 aa9.64□□□□□ -0.87
SND1-215ENST00000492772 ATAD3AQ9NVI7 634 aa9.64□□□□□ -0.87
SND1-215ENST00000492772 HDGFL3Q9Y3E1 203 aa9.64□□□□□ -0.87
SND1-215ENST00000492772 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.64□□□□□ -0.872e-13■□□□□ 10.4
SND1-215ENST00000492772 ARFGEF3Q5TH69 2177 aa9.64□□□□□ -0.87
SND1-215ENST00000492772 IGHV4-61A0A0C4DH41 118 aa9.63□□□□□ -0.87
SND1-215ENST00000492772 PDLIM1O00151 329 aa9.63□□□□□ -0.87
SND1-215ENST00000492772 CYP7B1O75881 506 aa9.63□□□□□ -0.87
SND1-215ENST00000492772 WNT11O96014 354 aa9.63□□□□□ -0.87
SND1-215ENST00000492772 CSTAP01040 98 aa9.63□□□□□ -0.87
SND1-215ENST00000492772 TGFAP01135 160 aa9.63□□□□□ -0.87
SND1-215ENST00000492772 TFPIP10646 304 aa9.63□□□□□ -0.87
SND1-215ENST00000492772 BCKDHAP12694 445 aa9.63□□□□□ -0.87
SND1-215ENST00000492772 FKBP2P26885 142 aaKnown RBP9.63□□□□□ -0.87
SND1-215ENST00000492772 APOBEC1P41238 236 aaKnown RBP9.63□□□□□ -0.87
SND1-215ENST00000492772 MAGEA8P43361 318 aa9.63□□□□□ -0.87
SND1-215ENST00000492772 CLK1P49759 484 aaKnown RBP9.63□□□□□ -0.87
SND1-215ENST00000492772 ZNF141Q15928 474 aa9.63□□□□□ -0.87
SND1-215ENST00000492772 CARTPTQ16568 116 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms