RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 MTDHQ86UE4 582 aaKnown RBP11.56□□□□□ -0.56
USF1-206ENST00000491629 LCA5Q86VQ0 697 aa11.56□□□□□ -0.56
USF1-206ENST00000491629 CCDC103Q8IW40 242 aa11.56□□□□□ -0.56
USF1-206ENST00000491629 UBE2J2Q8N2K1 259 aa11.56□□□□□ -0.56
USF1-206ENST00000491629 C17orf53Q8N3J3 647 aaPredicted RBP11.56□□□□□ -0.56
USF1-206ENST00000491629 ANKS4BQ8N8V4 417 aa11.56□□□□□ -0.56
USF1-206ENST00000491629 OR7A2PQ8NGA2 310 aa11.56□□□□□ -0.56
USF1-206ENST00000491629 FBXO17Q96EF6 278 aa11.56□□□□□ -0.56
USF1-206ENST00000491629 ARL5BQ96KC2 179 aa11.56□□□□□ -0.56
USF1-206ENST00000491629 THUMPD3Q9BV44 507 aaKnown RBP11.56□□□□□ -0.56
USF1-206ENST00000491629 HOXD1Q9GZZ0 328 aa11.56□□□□□ -0.56
USF1-206ENST00000491629 C12orf65Q9H3J6 166 aaKnown RBP11.56□□□□□ -0.56
USF1-206ENST00000491629 TAS2R16Q9NYV7 291 aa11.56□□□□□ -0.56
USF1-206ENST00000491629 DTNAQ9Y4J8 743 aa11.56□□□□□ -0.56
USF1-206ENST00000491629 A0A087WUV0 522 aaPredicted RBP11.55□□□□□ -0.56
USF1-206ENST00000491629 EXOC1LA0A1B0GW35 172 aa11.55□□□□□ -0.56
USF1-206ENST00000491629 SULT2B1O00204 365 aa11.55□□□□□ -0.56
USF1-206ENST00000491629 ZNF264O43296 627 aa11.55□□□□□ -0.56
USF1-206ENST00000491629 KCNAB3O43448 404 aa11.55□□□□□ -0.56
USF1-206ENST00000491629 EIF4E2O60573 245 aaKnown RBP11.55□□□□□ -0.56
USF1-206ENST00000491629 SLU7O95391 586 aaKnown RBP11.55□□□□□ -0.56
USF1-206ENST00000491629 UROSP10746 265 aa11.55□□□□□ -0.56
USF1-206ENST00000491629 ZNF23P17027 643 aa11.55□□□□□ -0.56
USF1-206ENST00000491629 PHC1P78364 1004 aa11.55□□□□□ -0.56
USF1-206ENST00000491629 CHRNB3Q05901 458 aa11.55□□□□□ -0.56
USF1-206ENST00000491629 SQLEQ14534 574 aa11.55□□□□□ -0.56
USF1-206ENST00000491629 MLC1Q15049 377 aa11.55□□□□□ -0.56
USF1-206ENST00000491629 SYT14P1Q58G82 188 aa11.55□□□□□ -0.56
USF1-206ENST00000491629 LIPNQ5VXI9 398 aa11.55□□□□□ -0.56
USF1-206ENST00000491629 ZYG11AQ6WRX3 759 aa11.55□□□□□ -0.56
USF1-206ENST00000491629 TMCO5AQ8N6Q1 288 aa11.55□□□□□ -0.56
USF1-206ENST00000491629 ZNF614Q8N883 585 aa11.55□□□□□ -0.56
USF1-206ENST00000491629 PSMA8Q8TAA3 256 aa11.55□□□□□ -0.56
USF1-206ENST00000491629 APH1AQ96BI3 265 aa11.55□□□□□ -0.56
USF1-206ENST00000491629 CHMP6Q96FZ7 201 aa11.55□□□□□ -0.56
USF1-206ENST00000491629 PIMREGQ9BSJ6 248 aa11.55□□□□□ -0.56
USF1-206ENST00000491629 ACTRT3Q9BYD9 372 aa11.55□□□□□ -0.56
USF1-206ENST00000491629 BPESC1Q9GZL8 116 aa11.55□□□□□ -0.56
USF1-206ENST00000491629 ADAM19Q9H013 955 aa11.55□□□□□ -0.56
USF1-206ENST00000491629 SERHL2Q9H4I8 314 aa11.55□□□□□ -0.56
USF1-206ENST00000491629 SLC17A5Q9NRA2 495 aa11.55□□□□□ -0.56
USF1-206ENST00000491629 ASB6Q9NWX5 421 aa11.55□□□□□ -0.56
USF1-206ENST00000491629 GIMAP2Q9UG22 337 aa11.55□□□□□ -0.56
USF1-206ENST00000491629 MOKQ9UQ07 419 aa11.55□□□□□ -0.56
USF1-206ENST00000491629 NOSIPQ9Y314 301 aaKnown RBP11.55□□□□□ -0.56
USF1-206ENST00000491629 PMF1-BGLAPU3KQ54 211 aa11.55□□□□□ -0.56
USF1-206ENST00000491629 A0A1W2PPM1 405 aa11.54□□□□□ -0.56
USF1-206ENST00000491629 LRP5LA4QPB2 252 aa11.54□□□□□ -0.56
USF1-206ENST00000491629 NDUFS8O00217 210 aa11.54□□□□□ -0.56
USF1-206ENST00000491629 LSM1O15116 133 aaKnown RBP11.54□□□□□ -0.56
USF1-206ENST00000491629 KIAA0513O60268 411 aa11.54□□□□□ -0.56
USF1-206ENST00000491629 FCMRO60667 390 aa11.54□□□□□ -0.56
USF1-206ENST00000491629 PROCP04070 461 aa11.54□□□□□ -0.56
USF1-206ENST00000491629 GSTA1P08263 222 aa11.54□□□□□ -0.56
USF1-206ENST00000491629 LAMP1P11279 417 aa11.54□□□□□ -0.56
USF1-206ENST00000491629 UBL4AP11441 157 aa11.54□□□□□ -0.56
USF1-206ENST00000491629 BCKDHAP12694 445 aa11.54□□□□□ -0.56
USF1-206ENST00000491629 ATP6V1C1P21283 382 aa11.54□□□□□ -0.56
USF1-206ENST00000491629 CCT3P49368 545 aaKnown RBP11.54□□□□□ -0.56
USF1-206ENST00000491629 CCR4P51679 360 aa11.54□□□□□ -0.56
USF1-206ENST00000491629 SLC16A1P53985 500 aa11.54□□□□□ -0.56
USF1-206ENST00000491629 RPL38P63173 70 aaKnown RBP11.54□□□□□ -0.56
USF1-206ENST00000491629 PLAURQ03405 335 aa11.54□□□□□ -0.56
USF1-206ENST00000491629 MERTKQ12866 999 aa11.54□□□□□ -0.56
USF1-206ENST00000491629 CBFBQ13951 182 aa11.54□□□□□ -0.56
USF1-206ENST00000491629 ZSWIM7Q19AV6 140 aa11.54□□□□□ -0.56
USF1-206ENST00000491629 LIPMQ5VYY2 423 aa11.54□□□□□ -0.56
USF1-206ENST00000491629 SYT10Q6XYQ8 523 aa11.54□□□□□ -0.56
USF1-206ENST00000491629 DEPDC4Q8N2C3 294 aa11.54□□□□□ -0.56
USF1-206ENST00000491629 RFLNBQ8N5W9 214 aa11.54□□□□□ -0.56
USF1-206ENST00000491629 TOR1AIP2Q8NFQ8 470 aa11.54□□□□□ -0.56
USF1-206ENST00000491629 OR5D16Q8NGK9 328 aa11.54□□□□□ -0.56
USF1-206ENST00000491629 ST8SIA1Q92185 356 aa11.54□□□□□ -0.56
USF1-206ENST00000491629 SDF2Q99470 211 aa11.54□□□□□ -0.56
USF1-206ENST00000491629 FMO2Q99518 471 aa11.54□□□□□ -0.56
USF1-206ENST00000491629 CCDC106Q9BWC9 280 aa11.54□□□□□ -0.56
USF1-206ENST00000491629 LAT2Q9GZY6 243 aa11.54□□□□□ -0.56
USF1-206ENST00000491629 CTPS2Q9NRF8 586 aa11.54□□□□□ -0.56
USF1-206ENST00000491629 SLC7A10Q9NS82 523 aa11.54□□□□□ -0.56
USF1-206ENST00000491629 ATP6V1HQ9UI12 483 aa11.54□□□□□ -0.56
USF1-206ENST00000491629 WNK2Q9Y3S1 2297 aa11.53□□□□□ -0.56
USF1-206ENST00000491629 LOC390937A0A1W2PQ73 354 aa11.53□□□□□ -0.56
USF1-206ENST00000491629 SERINC4A6NH21 518 aa11.53□□□□□ -0.56
USF1-206ENST00000491629 H3BNH8 94 aa11.53□□□□□ -0.56
USF1-206ENST00000491629 SLC28A1O00337 649 aa11.53□□□□□ -0.56
USF1-206ENST00000491629 SCAMP2O15127 329 aaKnown RBP11.53□□□□□ -0.56
USF1-206ENST00000491629 SPRY1O43609 319 aaPredicted RBP11.53□□□□□ -0.56
USF1-206ENST00000491629 TCF21O43680 179 aa11.53□□□□□ -0.56
USF1-206ENST00000491629 LINC00032P0C843 101 aa11.53□□□□□ -0.56
USF1-206ENST00000491629 MYL2P10916 166 aa11.53□□□□□ -0.56
USF1-206ENST00000491629 EGR1P18146 543 aa11.53□□□□□ -0.56
USF1-206ENST00000491629 HNF1AP20823 631 aa11.53□□□□□ -0.56
USF1-206ENST00000491629 CASQ1P31415 396 aa11.53□□□□□ -0.56
USF1-206ENST00000491629 H3F3AP84243 136 aa11.53□□□□□ -0.56
USF1-206ENST00000491629 TP53BP2Q13625 1128 aa11.53□□□□□ -0.56
USF1-206ENST00000491629 ZNF141Q15928 474 aa11.53□□□□□ -0.56
USF1-206ENST00000491629 MAPK14Q16539 360 aa11.53□□□□□ -0.56
USF1-206ENST00000491629 TSPO2Q5TGU0 170 aa11.53□□□□□ -0.56
USF1-206ENST00000491629 OR7E24Q6IFN5 339 aa11.53□□□□□ -0.56
USF1-206ENST00000491629 NOA1Q8NC60 698 aaKnown RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms