RNA–Protein interactions for RNA: ENST00000491421.5

LSM2-213, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-213ENST00000491421 NKIRAS1Q9NYS0 192 aa7.35□□□□□ -1.23
LSM2-213ENST00000491421 SPIN1Q9Y657 262 aaPredicted RBP7.35□□□□□ -1.23
LSM2-213ENST00000491421 NIPBLQ6KC79 2804 aaeCLIP7.35□□□□□ -1.23
LSM2-213ENST00000491421 MED13LQ71F56 2210 aa7.35□□□□□ -1.23
LSM2-213ENST00000491421 PRAMEF27A3QJZ7 478 aa7.34□□□□□ -1.23
LSM2-213ENST00000491421 CLDN24A6NM45 220 aa7.34□□□□□ -1.23
LSM2-213ENST00000491421 SLCO1B7G3V0H7 640 aa7.34□□□□□ -1.23
LSM2-213ENST00000491421 SULT2B1O00204 365 aa7.34□□□□□ -1.23
LSM2-213ENST00000491421 CYTIPO60759 359 aa7.34□□□□□ -1.23
LSM2-213ENST00000491421 BCAS1O75363 584 aaPredicted RBP7.34□□□□□ -1.23
LSM2-213ENST00000491421 ERLIN1O75477 346 aa7.34□□□□□ -1.23
LSM2-213ENST00000491421 ADAP00813 363 aa7.34□□□□□ -1.23
LSM2-213ENST00000491421 C1QCP02747 245 aa7.34□□□□□ -1.23
LSM2-213ENST00000491421 GSNP06396 782 aa7.34□□□□□ -1.23
LSM2-213ENST00000491421 FESP07332 822 aa7.34□□□□□ -1.23
LSM2-213ENST00000491421 TFPIP10646 304 aa7.34□□□□□ -1.23
LSM2-213ENST00000491421 IDO1P14902 403 aa7.34□□□□□ -1.23
LSM2-213ENST00000491421 IL12AP29459 219 aa7.34□□□□□ -1.23
LSM2-213ENST00000491421 ADSLP30566 484 aaPredicted RBP7.34□□□□□ -1.23
LSM2-213ENST00000491421 PGM1P36871 562 aa7.34□□□□□ -1.23
LSM2-213ENST00000491421 APOBEC1P41238 236 aaKnown RBP7.34□□□□□ -1.23
LSM2-213ENST00000491421 CDKN2CP42773 168 aa7.34□□□□□ -1.23
LSM2-213ENST00000491421 DIO1P49895 249 aa7.34□□□□□ -1.23
LSM2-213ENST00000491421 MAGOHP61326 146 aaKnown RBP7.34□□□□□ -1.23
LSM2-213ENST00000491421 CSNK2A1P68400 391 aaPredicted RBP7.34□□□□□ -1.23
LSM2-213ENST00000491421 KCNJ10P78508 379 aa7.34□□□□□ -1.23
LSM2-213ENST00000491421 TXNL4AP83876 142 aaKnown RBP7.34□□□□□ -1.23
LSM2-213ENST00000491421 CHRNEQ04844 493 aa7.34□□□□□ -1.23
LSM2-213ENST00000491421 RASGEF1BQ0VAM2 473 aa7.34□□□□□ -1.23
LSM2-213ENST00000491421 P2RY6Q15077 328 aa7.34□□□□□ -1.23
LSM2-213ENST00000491421 TSC22D1Q15714 1073 aa7.34□□□□□ -1.23
LSM2-213ENST00000491421 SFRP5Q5T4F7 317 aa7.34□□□□□ -1.23
LSM2-213ENST00000491421 AP1ARQ63HQ0 302 aa7.34□□□□□ -1.23
LSM2-213ENST00000491421 ZNF621Q6ZSS3 439 aa7.34□□□□□ -1.23
LSM2-213ENST00000491421 BIVMQ86UB2 503 aa7.34□□□□□ -1.23
LSM2-213ENST00000491421 ARFGAP2Q8N6H7 521 aa7.34□□□□□ -1.23
LSM2-213ENST00000491421 ANKFN1Q8N957 763 aa7.34□□□□□ -1.23
LSM2-213ENST00000491421 GLB1L3Q8NCI6 653 aaPredicted RBP7.34□□□□□ -1.23
LSM2-213ENST00000491421 RAB3IL1Q8TBN0 382 aa7.34□□□□□ -1.23
LSM2-213ENST00000491421 PNPT1Q8TCS8 783 aaKnown RBP7.34□□□□□ -1.23
LSM2-213ENST00000491421 ZG16BQ96DA0 208 aa7.34□□□□□ -1.23
LSM2-213ENST00000491421 PERPQ96FX8 193 aa7.34□□□□□ -1.23
LSM2-213ENST00000491421 C18orf12Q96KH6 178 aa7.34□□□□□ -1.23
LSM2-213ENST00000491421 TRNT1Q96Q11 434 aaKnown RBP7.34□□□□□ -1.23
LSM2-213ENST00000491421 INPP5KQ9BT40 448 aa7.34□□□□□ -1.23
LSM2-213ENST00000491421 CCDC106Q9BWC9 280 aa7.34□□□□□ -1.23
LSM2-213ENST00000491421 BCO1Q9HAY6 547 aa7.34□□□□□ -1.23
LSM2-213ENST00000491421 EXOSC3Q9NQT5 275 aaKnown RBP7.34□□□□□ -1.23
LSM2-213ENST00000491421 CTPS2Q9NRF8 586 aa7.34□□□□□ -1.23
LSM2-213ENST00000491421 CHRNA9Q9UGM1 479 aa7.34□□□□□ -1.23
LSM2-213ENST00000491421 ING1Q9UK53 422 aaPredicted RBP7.34□□□□□ -1.23
LSM2-213ENST00000491421 LIPT1Q9Y234 373 aa7.34□□□□□ -1.23
LSM2-213ENST00000491421 GPR45Q9Y5Y3 372 aa7.34□□□□□ -1.23
LSM2-213ENST00000491421 ACANP16112 2415 aa7.34□□□□□ -1.23
LSM2-213ENST00000491421 MPDZO75970 2070 aa7.33□□□□□ -1.24
LSM2-213ENST00000491421 AGAP5A6NIR3 686 aa7.33□□□□□ -1.24
LSM2-213ENST00000491421 ZNF724A8MTY0 619 aa7.33□□□□□ -1.24
LSM2-213ENST00000491421 ZNF814B7Z6K7 855 aa7.33□□□□□ -1.24
LSM2-213ENST00000491421 RFXANKO14593 260 aa7.33□□□□□ -1.24
LSM2-213ENST00000491421 HS3ST1O14792 307 aa7.33□□□□□ -1.24
LSM2-213ENST00000491421 SLC22A3O75751 556 aa7.33□□□□□ -1.24
LSM2-213ENST00000491421 KRT75O95678 551 aa7.33□□□□□ -1.24
LSM2-213ENST00000491421 PLAUP00749 431 aa7.33□□□□□ -1.24
LSM2-213ENST00000491421 IL6P05231 212 aa7.33□□□□□ -1.24
LSM2-213ENST00000491421 CHRM4P08173 479 aa7.33□□□□□ -1.24
LSM2-213ENST00000491421 INHBBP09529 407 aa7.33□□□□□ -1.24
LSM2-213ENST00000491421 NR2F1P10589 423 aa7.33□□□□□ -1.24
LSM2-213ENST00000491421 OR3A2P47893 321 aa7.33□□□□□ -1.24
LSM2-213ENST00000491421 IDH2P48735 452 aaKnown RBP7.33□□□□□ -1.24
LSM2-213ENST00000491421 SLC18A1P54219 525 aa7.33□□□□□ -1.24
LSM2-213ENST00000491421 ITGADQ13349 1161 aa7.33□□□□□ -1.24
LSM2-213ENST00000491421 GNA13Q14344 377 aa7.33□□□□□ -1.24
LSM2-213ENST00000491421 CAPRIN1Q14444 709 aaKnown RBP7.33□□□□□ -1.24
LSM2-213ENST00000491421 TAB1Q15750 504 aa7.33□□□□□ -1.24
LSM2-213ENST00000491421 SYPL1Q16563 259 aa7.33□□□□□ -1.24
LSM2-213ENST00000491421 PDCD4Q53EL6 469 aaKnown RBP7.33□□□□□ -1.24
LSM2-213ENST00000491421 COX20Q5RI15 118 aa7.33□□□□□ -1.24
LSM2-213ENST00000491421 ABLIM2Q6H8Q1 611 aa7.33□□□□□ -1.24
LSM2-213ENST00000491421 TMPPEQ6ZT21 453 aa7.33□□□□□ -1.24
LSM2-213ENST00000491421 Q6ZT83 130 aa7.33□□□□□ -1.24
LSM2-213ENST00000491421 GRINAQ7Z429 371 aa7.33□□□□□ -1.24
LSM2-213ENST00000491421 YTHDF3Q7Z739 585 aaKnown RBP7.33□□□□□ -1.24
LSM2-213ENST00000491421 GALNT5Q7Z7M9 940 aa7.33□□□□□ -1.24
LSM2-213ENST00000491421 MTDHQ86UE4 582 aaKnown RBP7.33□□□□□ -1.24
LSM2-213ENST00000491421 CMIPQ8IY22 773 aa7.33□□□□□ -1.24
LSM2-213ENST00000491421 ZNF100Q8IYN0 542 aa7.33□□□□□ -1.24
LSM2-213ENST00000491421 TMEM171Q8WVE6 324 aa7.33□□□□□ -1.24
LSM2-213ENST00000491421 HSD17B8Q92506 261 aa7.33□□□□□ -1.24
LSM2-213ENST00000491421 CNOT9Q92600 299 aaKnown RBP7.33□□□□□ -1.24
LSM2-213ENST00000491421 ZNF775Q96BV0 537 aaPredicted RBP7.33□□□□□ -1.24
LSM2-213ENST00000491421 ZHX1-C8orf76Q96EF9 292 aa7.33□□□□□ -1.24
LSM2-213ENST00000491421 Q96MF0 132 aa7.33□□□□□ -1.24
LSM2-213ENST00000491421 ZNF300Q96RE9 604 aaPredicted RBP7.33□□□□□ -1.24
LSM2-213ENST00000491421 USB1Q9BQ65 265 aaKnown RBP7.33□□□□□ -1.24
LSM2-213ENST00000491421 TMEM204Q9BSN7 226 aa7.33□□□□□ -1.24
LSM2-213ENST00000491421 POTEKPQ9BYX7 375 aa7.33□□□□□ -1.24
LSM2-213ENST00000491421 SLC38A1Q9H2H9 487 aa7.33□□□□□ -1.24
LSM2-213ENST00000491421 MANSC1Q9H8J5 431 aa7.33□□□□□ -1.24
LSM2-213ENST00000491421 MTHFD2LQ9H903 347 aaPredicted RBP7.33□□□□□ -1.24
LSM2-213ENST00000491421 NGBQ9NPG2 151 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms