RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 PDCD4Q53EL6 469 aaKnown RBP15.99■□□□□ 0.15
HMGN1-219ENST00000491183 BEX5Q5H9J7 111 aa15.99■□□□□ 0.15
HMGN1-219ENST00000491183 TMPPEQ6ZT21 453 aa15.99■□□□□ 0.15
HMGN1-219ENST00000491183 LSRQ86X29 649 aaPredicted RBP15.99■□□□□ 0.15
HMGN1-219ENST00000491183 WFDC8Q8IUA0 241 aa15.99■□□□□ 0.15
HMGN1-219ENST00000491183 TRIML2Q8N7C3 387 aa15.99■□□□□ 0.15
HMGN1-219ENST00000491183 GLB1L3Q8NCI6 653 aaPredicted RBP15.99■□□□□ 0.15
HMGN1-219ENST00000491183 PNPT1Q8TCS8 783 aaKnown RBP15.99■□□□□ 0.15
HMGN1-219ENST00000491183 ZNF75CPQ92670 426 aaPredicted RBP15.99■□□□□ 0.15
HMGN1-219ENST00000491183 ARL8AQ96BM9 186 aa15.99■□□□□ 0.15
HMGN1-219ENST00000491183 ZNF775Q96BV0 537 aaPredicted RBP15.99■□□□□ 0.15
HMGN1-219ENST00000491183 TRNT1Q96Q11 434 aaKnown RBP15.99■□□□□ 0.15
HMGN1-219ENST00000491183 OR52B2Q96RD2 323 aa15.99■□□□□ 0.15
HMGN1-219ENST00000491183 ZBTB18Q99592 522 aa15.99■□□□□ 0.15
HMGN1-219ENST00000491183 PIP5K1AQ99755 562 aa15.99■□□□□ 0.15
HMGN1-219ENST00000491183 GSX1Q9H4S2 264 aaPredicted RBP15.99■□□□□ 0.15
HMGN1-219ENST00000491183 CTPS2Q9NRF8 586 aa15.99■□□□□ 0.15
HMGN1-219ENST00000491183 LIPT1Q9Y234 373 aa15.99■□□□□ 0.15
HMGN1-219ENST00000491183 SETD2Q9BYW2 2564 aaPredicted RBP15.98■□□□□ 0.15
HMGN1-219ENST00000491183 AGAP5A6NIR3 686 aa15.98■□□□□ 0.15
HMGN1-219ENST00000491183 SLC22A3O75751 556 aa15.98■□□□□ 0.15
HMGN1-219ENST00000491183 PLAUP00749 431 aa15.98■□□□□ 0.15
HMGN1-219ENST00000491183 IDO1P14902 403 aa15.98■□□□□ 0.15
HMGN1-219ENST00000491183 FPR1P21462 350 aa15.98■□□□□ 0.15
HMGN1-219ENST00000491183 EDNRAP25101 427 aa15.98■□□□□ 0.15
HMGN1-219ENST00000491183 APOBEC1P41238 236 aaKnown RBP15.98■□□□□ 0.15
HMGN1-219ENST00000491183 DIO1P49895 249 aa15.98■□□□□ 0.15
HMGN1-219ENST00000491183 MVDP53602 400 aa15.98■□□□□ 0.15
HMGN1-219ENST00000491183 LRRC74AQ0VAA2 488 aa15.98■□□□□ 0.15
HMGN1-219ENST00000491183 RASGEF1BQ0VAM2 473 aa15.98■□□□□ 0.15
HMGN1-219ENST00000491183 SYT14P1Q58G82 188 aa15.98■□□□□ 0.15
HMGN1-219ENST00000491183 SFRP5Q5T4F7 317 aa15.98■□□□□ 0.15
HMGN1-219ENST00000491183 LRRC74BQ6ZQY2 392 aa15.98■□□□□ 0.15
HMGN1-219ENST00000491183 ADGRG3Q86Y34 549 aa15.98■□□□□ 0.15
HMGN1-219ENST00000491183 STEAP2Q8NFT2 490 aa15.98■□□□□ 0.15
HMGN1-219ENST00000491183 ZNF563Q8TA94 476 aa15.98■□□□□ 0.15
HMGN1-219ENST00000491183 PIWIL2Q8TC59 973 aaKnown RBP15.98■□□□□ 0.15
HMGN1-219ENST00000491183 PIGTQ969N2 578 aa15.98■□□□□ 0.15
HMGN1-219ENST00000491183 S100PBPQ96BU1 408 aa15.98■□□□□ 0.15
HMGN1-219ENST00000491183 ZNF300Q96RE9 604 aaPredicted RBP15.98■□□□□ 0.15
HMGN1-219ENST00000491183 HDHD5Q9BXW7 423 aa15.98■□□□□ 0.15
HMGN1-219ENST00000491183 EXOSC3Q9NQT5 275 aaKnown RBP15.98■□□□□ 0.15
HMGN1-219ENST00000491183 KLHL9Q9P2J3 617 aa15.98■□□□□ 0.15
HMGN1-219ENST00000491183 PRSS50Q9UI38 385 aa15.98■□□□□ 0.15
HMGN1-219ENST00000491183 SULT2B1O00204 365 aa15.97■□□□□ 0.15
HMGN1-219ENST00000491183 RFXANKO14593 260 aa15.97■□□□□ 0.15
HMGN1-219ENST00000491183 AP3D1O14617 1153 aa15.97■□□□□ 0.15
HMGN1-219ENST00000491183 KLF11O14901 512 aa15.97■□□□□ 0.15
HMGN1-219ENST00000491183 ADAP00813 363 aa15.97■□□□□ 0.15
HMGN1-219ENST00000491183 IL6P05231 212 aa15.97■□□□□ 0.15
HMGN1-219ENST00000491183 FESP07332 822 aa15.97■□□□□ 0.15
HMGN1-219ENST00000491183 FOSL1P15407 271 aa15.97■□□□□ 0.15
HMGN1-219ENST00000491183 OR3A2P47893 321 aa15.97■□□□□ 0.15
HMGN1-219ENST00000491183 TXNL4AP83876 142 aaKnown RBP15.97■□□□□ 0.15
HMGN1-219ENST00000491183 HPCAP84074 193 aa15.97■□□□□ 0.15
HMGN1-219ENST00000491183 GRINAQ7Z429 371 aa15.97■□□□□ 0.15
HMGN1-219ENST00000491183 ARFGAP2Q8N6H7 521 aa15.97■□□□□ 0.15
HMGN1-219ENST00000491183 SLC25A43Q8WUT9 341 aaPredicted RBP15.97■□□□□ 0.15
HMGN1-219ENST00000491183 PLPPR2Q96GM1 343 aa15.97■□□□□ 0.15
HMGN1-219ENST00000491183 ARL5BQ96KC2 179 aa15.97■□□□□ 0.15
HMGN1-219ENST00000491183 TACO1Q9BSH4 297 aaKnown RBP15.97■□□□□ 0.15
HMGN1-219ENST00000491183 TMEM204Q9BSN7 226 aa15.97■□□□□ 0.15
HMGN1-219ENST00000491183 MTHFD2LQ9H903 347 aaPredicted RBP15.97■□□□□ 0.15
HMGN1-219ENST00000491183 SDR39U1Q9NRG7 319 aaPredicted RBP15.97■□□□□ 0.15
HMGN1-219ENST00000491183 CHRNA9Q9UGM1 479 aa15.97■□□□□ 0.15
HMGN1-219ENST00000491183 VPS13CQ709C8 3753 aa15.97■□□□□ 0.15
HMGN1-219ENST00000491183 ROS1P08922 2347 aa15.96■□□□□ 0.15
HMGN1-219ENST00000491183 ZNF724A8MTY0 619 aa15.96■□□□□ 0.15
HMGN1-219ENST00000491183 SMPD2O60906 423 aa15.96■□□□□ 0.15
HMGN1-219ENST00000491183 NR2F1P10589 423 aa15.96■□□□□ 0.15
HMGN1-219ENST00000491183 TFPIP10646 304 aa15.96■□□□□ 0.15
HMGN1-219ENST00000491183 RPS4Y1P22090 263 aaKnown RBP15.96■□□□□ 0.15
HMGN1-219ENST00000491183 IDH2P48735 452 aaKnown RBP15.96■□□□□ 0.15
HMGN1-219ENST00000491183 ANXA11P50995 505 aaKnown RBP15.96■□□□□ 0.15
HMGN1-219ENST00000491183 GSTA3Q16772 222 aa15.96■□□□□ 0.15
HMGN1-219ENST00000491183 SHEQ5VZ18 495 aa15.96■□□□□ 0.15
HMGN1-219ENST00000491183 ALKBH2Q6NS38 261 aa15.96■□□□□ 0.15
HMGN1-219ENST00000491183 DNAJC14Q6Y2X3 702 aaPredicted RBP15.96■□□□□ 0.15
HMGN1-219ENST00000491183 ZNF704Q6ZNC4 412 aaPredicted RBP15.96■□□□□ 0.15
HMGN1-219ENST00000491183 C20orf204Q6ZNR8 217 aa15.96■□□□□ 0.15
HMGN1-219ENST00000491183 MTDHQ86UE4 582 aaKnown RBP15.96■□□□□ 0.15
HMGN1-219ENST00000491183 LRRC75A-AS1Q8N1F1 130 aa15.96■□□□□ 0.15
HMGN1-219ENST00000491183 IGFBPL1Q8WX77 278 aa15.96■□□□□ 0.15
HMGN1-219ENST00000491183 DNAJA3Q96EY1 480 aa15.96■□□□□ 0.15
HMGN1-219ENST00000491183 CCL19Q99731 98 aa15.96■□□□□ 0.15
HMGN1-219ENST00000491183 OR11A1Q9GZK7 315 aa15.96■□□□□ 0.15
HMGN1-219ENST00000491183 ZIM2Q9NZV7 527 aa15.96■□□□□ 0.15
HMGN1-219ENST00000491183 ARID1AO14497 2285 aa15.96■□□□□ 0.14
HMGN1-219ENST00000491183 KRT75O95678 551 aa15.95■□□□□ 0.14
HMGN1-219ENST00000491183 ZCCHC18P0CG32 403 aa15.95■□□□□ 0.14
HMGN1-219ENST00000491183 CCNA2P20248 432 aa15.95■□□□□ 0.14
HMGN1-219ENST00000491183 NR1H2P55055 460 aa15.95■□□□□ 0.14
HMGN1-219ENST00000491183 CSNK2A1P68400 391 aaPredicted RBP15.95■□□□□ 0.14
HMGN1-219ENST00000491183 ITGADQ13349 1161 aa15.95■□□□□ 0.14
HMGN1-219ENST00000491183 P2RY6Q15077 328 aa15.95■□□□□ 0.14
HMGN1-219ENST00000491183 TAB1Q15750 504 aa15.95■□□□□ 0.14
HMGN1-219ENST00000491183 GTDC1Q4AE62 458 aa15.95■□□□□ 0.14
HMGN1-219ENST00000491183 AGBL2Q5U5Z8 902 aa15.95■□□□□ 0.14
HMGN1-219ENST00000491183 Q6ZT83 130 aa15.95■□□□□ 0.14
HMGN1-219ENST00000491183 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms