RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 C17orf47Q8NEP4 570 aa12.7□□□□□ -0.38
SMPD4-219ENST00000491128 ATP6V1C2Q8NEY4 427 aa12.7□□□□□ -0.38
SMPD4-219ENST00000491128 OR5M1Q8NGP8 315 aa12.7□□□□□ -0.38
SMPD4-219ENST00000491128 OR52D1Q9H346 318 aa12.7□□□□□ -0.38
SMPD4-219ENST00000491128 IGKV1D-42A0A075B6H8 117 aa12.69□□□□□ -0.38
SMPD4-219ENST00000491128 ZC3H12DA2A288 527 aaKnown RBP12.69□□□□□ -0.38
SMPD4-219ENST00000491128 ELOA3DA6NLF2 546 aaPredicted RBP12.69□□□□□ -0.38
SMPD4-219ENST00000491128 TMX2-CTNND1H3BSU7 103 aa12.69□□□□□ -0.38
SMPD4-219ENST00000491128 NUP107P57740 925 aa12.69□□□□□ -0.38
SMPD4-219ENST00000491128 DNASE1L3Q13609 305 aa12.69□□□□□ -0.38
SMPD4-219ENST00000491128 ELOA3BQ3SY89 546 aa12.69□□□□□ -0.38
SMPD4-219ENST00000491128 NDUFAF7Q7L592 441 aa12.69□□□□□ -0.38
SMPD4-219ENST00000491128 NLGN4YQ8NFZ3 816 aaPredicted RBP12.69□□□□□ -0.38
SMPD4-219ENST00000491128 ELOA3Q8NG57 546 aa12.69□□□□□ -0.38
SMPD4-219ENST00000491128 FANK1Q8TC84 345 aa12.69□□□□□ -0.38
SMPD4-219ENST00000491128 NR4A3Q92570 626 aa12.69□□□□□ -0.38
SMPD4-219ENST00000491128 ZPBPQ9BS86 351 aa12.69□□□□□ -0.38
SMPD4-219ENST00000491128 P4HTMQ9NXG6 502 aa12.69□□□□□ -0.38
SMPD4-219ENST00000491128 ALPK2Q86TB3 2170 aa12.69□□□□□ -0.38
SMPD4-219ENST00000491128 PCSK5Q92824 1860 aa12.69□□□□□ -0.38
SMPD4-219ENST00000491128 A0A087WUJ7 227 aa12.69□□□□□ -0.38
SMPD4-219ENST00000491128 TRIM64A6NGJ6 449 aa12.69□□□□□ -0.38
SMPD4-219ENST00000491128 EFCAB9A8MZ26 197 aa12.69□□□□□ -0.38
SMPD4-219ENST00000491128 MT-ND2P03891 347 aa12.69□□□□□ -0.38
SMPD4-219ENST00000491128 STSP08842 583 aa12.69□□□□□ -0.38
SMPD4-219ENST00000491128 NOVA1P51513 510 aaKnown RBP12.69□□□□□ -0.38
SMPD4-219ENST00000491128 PRKCDQ05655 676 aa12.69□□□□□ -0.38
SMPD4-219ENST00000491128 ATP1A4Q13733 1029 aa12.69□□□□□ -0.38
SMPD4-219ENST00000491128 PLAG1Q6DJT9 500 aa12.69□□□□□ -0.38
SMPD4-219ENST00000491128 WBP2NLQ6ICG8 309 aa12.69□□□□□ -0.38
SMPD4-219ENST00000491128 SLC27A4Q6P1M0 643 aa12.69□□□□□ -0.38
SMPD4-219ENST00000491128 CD300LDQ6UXZ3 194 aa12.69□□□□□ -0.38
SMPD4-219ENST00000491128 RASSF6Q6ZTQ3 369 aa12.69□□□□□ -0.38
SMPD4-219ENST00000491128 OAFQ86UD1 273 aa12.69□□□□□ -0.38
SMPD4-219ENST00000491128 LINC00471Q8N535 108 aa12.69□□□□□ -0.38
SMPD4-219ENST00000491128 IL22RA1Q8N6P7 574 aa12.69□□□□□ -0.38
SMPD4-219ENST00000491128 GGHQ92820 318 aa12.69□□□□□ -0.38
SMPD4-219ENST00000491128 HGDQ93099 445 aa12.69□□□□□ -0.38
SMPD4-219ENST00000491128 KTI12Q96EK9 354 aaPredicted RBP12.69□□□□□ -0.38
SMPD4-219ENST00000491128 MOGAT1Q96PD6 335 aa12.69□□□□□ -0.38
SMPD4-219ENST00000491128 LAT2Q9GZY6 243 aa12.69□□□□□ -0.38
SMPD4-219ENST00000491128 METTL7AQ9H8H3 244 aa12.69□□□□□ -0.38
SMPD4-219ENST00000491128 SEC14L4Q9UDX3 406 aa12.69□□□□□ -0.38
SMPD4-219ENST00000491128 RAD1O60671 282 aa12.68□□□□□ -0.38
SMPD4-219ENST00000491128 SERPINI2O75830 405 aa12.68□□□□□ -0.38
SMPD4-219ENST00000491128 GSTM3P21266 225 aa12.68□□□□□ -0.38
SMPD4-219ENST00000491128 NR4A1P22736 598 aa12.68□□□□□ -0.38
SMPD4-219ENST00000491128 ADH7P40394 386 aa12.68□□□□□ -0.38
SMPD4-219ENST00000491128 NR1H2P55055 460 aa12.68□□□□□ -0.38
SMPD4-219ENST00000491128 SLC35A2P78381 396 aa12.68□□□□□ -0.38
SMPD4-219ENST00000491128 CDK5Q00535 292 aa12.68□□□□□ -0.38
SMPD4-219ENST00000491128 EGR4Q05215 589 aa12.68□□□□□ -0.38
SMPD4-219ENST00000491128 QPRTQ15274 297 aa12.68□□□□□ -0.38
SMPD4-219ENST00000491128 C12orf73Q69YU5 71 aa12.68□□□□□ -0.38
SMPD4-219ENST00000491128 XAF1Q6GPH4 301 aa12.68□□□□□ -0.38
SMPD4-219ENST00000491128 ZNF773Q6PK81 442 aa12.68□□□□□ -0.38
SMPD4-219ENST00000491128 LINC00114Q6XXX2 140 aa12.68□□□□□ -0.38
SMPD4-219ENST00000491128 SHFQ7M4L6 423 aa12.68□□□□□ -0.38
SMPD4-219ENST00000491128 ATG4DQ86TL0 474 aaPredicted RBP12.68□□□□□ -0.38
SMPD4-219ENST00000491128 C7orf57Q8NEG2 295 aa12.68□□□□□ -0.38
SMPD4-219ENST00000491128 BBS1Q8NFJ9 593 aa12.68□□□□□ -0.38
SMPD4-219ENST00000491128 LRR1Q96L50 414 aa12.68□□□□□ -0.38
SMPD4-219ENST00000491128 OR11A1Q9GZK7 315 aa12.68□□□□□ -0.38
SMPD4-219ENST00000491128 MED20Q9H944 212 aa12.68□□□□□ -0.38
SMPD4-219ENST00000491128 HHATLQ9HCP6 504 aa12.68□□□□□ -0.38
SMPD4-219ENST00000491128 LRP3O75074 770 aa12.68□□□□□ -0.38
SMPD4-219ENST00000491128 INMTO95050 263 aa12.68□□□□□ -0.38
SMPD4-219ENST00000491128 STAT5AP42229 794 aa12.68□□□□□ -0.38
SMPD4-219ENST00000491128 RPS5P46782 204 aaKnown RBP12.68□□□□□ -0.38
SMPD4-219ENST00000491128 BROXQ5VW32 411 aa12.68□□□□□ -0.38
SMPD4-219ENST00000491128 MDGA2Q7Z553 956 aa12.68□□□□□ -0.38
SMPD4-219ENST00000491128 GLRX5Q86SX6 157 aa12.68□□□□□ -0.38
SMPD4-219ENST00000491128 CDK20Q8IZL9 346 aa12.68□□□□□ -0.38
SMPD4-219ENST00000491128 DEPDC4Q8N2C3 294 aa12.68□□□□□ -0.38
SMPD4-219ENST00000491128 COPS4Q9BT78 406 aa12.68□□□□□ -0.38
SMPD4-219ENST00000491128 ZNF426Q9BUY5 554 aa12.68□□□□□ -0.38
SMPD4-219ENST00000491128 NAA50Q9GZZ1 169 aaKnown RBP12.68□□□□□ -0.38
SMPD4-219ENST00000491128 UBQLN3Q9H347 655 aa12.68□□□□□ -0.38
SMPD4-219ENST00000491128 SCN3BQ9NY72 215 aa12.68□□□□□ -0.38
SMPD4-219ENST00000491128 IL20Q9NYY1 176 aa12.68□□□□□ -0.38
SMPD4-219ENST00000491128 OSGIN1Q9UJX0 560 aa12.68□□□□□ -0.38
SMPD4-219ENST00000491128 SIGLEC7Q9Y286 467 aa12.68□□□□□ -0.38
SMPD4-219ENST00000491128 HSPE1-MOB4S4R3N1 261 aa12.68□□□□□ -0.38
SMPD4-219ENST00000491128 DMXL2Q8TDJ6 3036 aa12.67□□□□□ -0.38
SMPD4-219ENST00000491128 BLOC1S5-TXNDC5H3BN57 136 aa12.67□□□□□ -0.38
SMPD4-219ENST00000491128 IMPA2O14732 288 aa12.67□□□□□ -0.38
SMPD4-219ENST00000491128 MASP1P48740 699 aa12.67□□□□□ -0.38
SMPD4-219ENST00000491128 PCYT1AP49585 367 aa12.67□□□□□ -0.38
SMPD4-219ENST00000491128 SMSP52788 366 aa12.67□□□□□ -0.38
SMPD4-219ENST00000491128 EMX1Q04741 257 aaPredicted RBP12.67□□□□□ -0.38
SMPD4-219ENST00000491128 VASH2Q86V25 355 aa12.67□□□□□ -0.38
SMPD4-219ENST00000491128 ESX1Q8N693 406 aa12.67□□□□□ -0.38
SMPD4-219ENST00000491128 B4GALNT2Q8NHY0 566 aa12.67□□□□□ -0.38
SMPD4-219ENST00000491128 BRIX1Q8TDN6 353 aaKnown RBP12.67□□□□□ -0.38
SMPD4-219ENST00000491128 TMCO6Q96DC7 493 aa12.67□□□□□ -0.38
SMPD4-219ENST00000491128 SPACA9Q96E40 222 aaPredicted RBP12.67□□□□□ -0.38
SMPD4-219ENST00000491128 HS6ST2Q96MM7 605 aa12.67□□□□□ -0.38
SMPD4-219ENST00000491128 IFT27Q9BW83 186 aa12.67□□□□□ -0.38
SMPD4-219ENST00000491128 ENOPH1Q9UHY7 261 aa12.67□□□□□ -0.38
SMPD4-219ENST00000491128 FBXL2Q9UKC9 423 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms