RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 SLC18B1Q6NT16 456 aa6.8□□□□□ -1.32
NPHP3-208ENST00000490993 ACSM5Q6NUN0 579 aa6.8□□□□□ -1.32
NPHP3-208ENST00000490993 CENPOQ9BU64 300 aa6.8□□□□□ -1.32
NPHP3-208ENST00000490993 SRA1Q9HD15 236 aaKnown RBP6.8□□□□□ -1.32
NPHP3-208ENST00000490993 ENAMQ9NRM1 1142 aa6.8□□□□□ -1.32
NPHP3-208ENST00000490993 MCUBQ9NWR8 336 aa6.8□□□□□ -1.32
NPHP3-208ENST00000490993 TXNL4BQ9NX01 149 aaKnown RBP6.8□□□□□ -1.32
NPHP3-208ENST00000490993 UPB1Q9UBR1 384 aa6.8□□□□□ -1.32
NPHP3-208ENST00000490993 N6AMT1Q9Y5N5 214 aa6.8□□□□□ -1.32
NPHP3-208ENST00000490993 NOX1Q9Y5S8 564 aa6.8□□□□□ -1.32
NPHP3-208ENST00000490993 PEX12O00623 359 aa6.8□□□□□ -1.32
NPHP3-208ENST00000490993 GPRIN2O60269 458 aa6.8□□□□□ -1.32
NPHP3-208ENST00000490993 PIP5K1CO60331 668 aa6.8□□□□□ -1.32
NPHP3-208ENST00000490993 OR7A10O76100 309 aa6.8□□□□□ -1.32
NPHP3-208ENST00000490993 CD53P19397 219 aa6.8□□□□□ -1.32
NPHP3-208ENST00000490993 MAOAP21397 527 aa6.8□□□□□ -1.32
NPHP3-208ENST00000490993 ACVR1BP36896 505 aa6.8□□□□□ -1.32
NPHP3-208ENST00000490993 CBX3Q13185 183 aa6.8□□□□□ -1.32
NPHP3-208ENST00000490993 CTF1Q16619 201 aa6.8□□□□□ -1.32
NPHP3-208ENST00000490993 RPL22L1Q6P5R6 122 aaKnown RBP6.8□□□□□ -1.32
NPHP3-208ENST00000490993 CCBE1Q6UXH8 406 aaPredicted RBP6.8□□□□□ -1.32
NPHP3-208ENST00000490993 CNOT9Q92600 299 aaKnown RBP6.8□□□□□ -1.32
NPHP3-208ENST00000490993 KIAA1143Q96AT1 154 aaPredicted RBP6.8□□□□□ -1.32
NPHP3-208ENST00000490993 SENP5Q96HI0 755 aaPredicted RBP6.8□□□□□ -1.32
NPHP3-208ENST00000490993 TNFRSF13CQ96RJ3 184 aa6.8□□□□□ -1.32
NPHP3-208ENST00000490993 ZNF222Q9UK12 451 aa6.8□□□□□ -1.32
NPHP3-208ENST00000490993 EXO1Q9UQ84 846 aaKnown RBP6.8□□□□□ -1.32
NPHP3-208ENST00000490993 C11orf98E9PRG8 122 aa6.79□□□□□ -1.32
NPHP3-208ENST00000490993 HOXB9P17482 250 aaPredicted RBP6.79□□□□□ -1.32
NPHP3-208ENST00000490993 TGFBR2P37173 567 aa6.79□□□□□ -1.32
NPHP3-208ENST00000490993 MAP2K3P46734 347 aa6.79□□□□□ -1.32
NPHP3-208ENST00000490993 DAP3P51398 398 aaKnown RBP6.79□□□□□ -1.32
NPHP3-208ENST00000490993 CAPZA1P52907 286 aa6.79□□□□□ -1.32
NPHP3-208ENST00000490993 UBE2IP63279 158 aaKnown RBP6.79□□□□□ -1.32
NPHP3-208ENST00000490993 CDK5Q00535 292 aa6.79□□□□□ -1.32
NPHP3-208ENST00000490993 SNTA1Q13424 505 aa6.79□□□□□ -1.32
NPHP3-208ENST00000490993 PDSS1Q5T2R2 415 aa6.79□□□□□ -1.32
NPHP3-208ENST00000490993 Q6ZS52 159 aa6.79□□□□□ -1.32
NPHP3-208ENST00000490993 BCORP1Q8N888 145 aa6.79□□□□□ -1.32
NPHP3-208ENST00000490993 SLC37A3Q8NCC5 494 aa6.79□□□□□ -1.32
NPHP3-208ENST00000490993 SDR9C7Q8NEX9 313 aa6.79□□□□□ -1.32
NPHP3-208ENST00000490993 C1orf216Q8TAB5 229 aa6.79□□□□□ -1.32
NPHP3-208ENST00000490993 CMC2Q9NRP2 79 aa6.79□□□□□ -1.32
NPHP3-208ENST00000490993 ERVK13-1Q9NX77 482 aa6.79□□□□□ -1.32
NPHP3-208ENST00000490993 MTCH2Q9Y6C9 303 aa6.79□□□□□ -1.32
NPHP3-208ENST00000490993 IGHV1OR15-9A0A0B4J2B8 117 aa6.79□□□□□ -1.32
NPHP3-208ENST00000490993 CDHR4A6H8M9 788 aa6.79□□□□□ -1.32
NPHP3-208ENST00000490993 GABRPO00591 440 aa6.79□□□□□ -1.32
NPHP3-208ENST00000490993 SURF4O15260 269 aa6.79□□□□□ -1.32
NPHP3-208ENST00000490993 GLB1P16278 677 aa6.79□□□□□ -1.32
NPHP3-208ENST00000490993 S1PR1P21453 382 aa6.79□□□□□ -1.32
NPHP3-208ENST00000490993 PTBP1P26599 531 aaKnown RBP eCLIP6.79□□□□□ -1.32
NPHP3-208ENST00000490993 PEBP1P30086 187 aaKnown RBP6.79□□□□□ -1.32
NPHP3-208ENST00000490993 TNFSF8P32971 234 aa6.79□□□□□ -1.32
NPHP3-208ENST00000490993 MTNR1BP49286 362 aa6.79□□□□□ -1.32
NPHP3-208ENST00000490993 POLR2HP52434 150 aaKnown RBP6.79□□□□□ -1.32
NPHP3-208ENST00000490993 OR1D5P58170 312 aa6.79□□□□□ -1.32
NPHP3-208ENST00000490993 OR12D2P58182 307 aa6.79□□□□□ -1.32
NPHP3-208ENST00000490993 OR2G6Q5TZ20 316 aa6.79□□□□□ -1.32
NPHP3-208ENST00000490993 NKAIN2Q5VXU1 208 aa6.79□□□□□ -1.32
NPHP3-208ENST00000490993 ATCAYQ86WG3 371 aa6.79□□□□□ -1.32
NPHP3-208ENST00000490993 PPP1R3BQ86XI6 285 aa6.79□□□□□ -1.32
NPHP3-208ENST00000490993 CYB561A3Q8NBI2 242 aa6.79□□□□□ -1.32
NPHP3-208ENST00000490993 FBLIM1Q8WUP2 373 aa6.79□□□□□ -1.32
NPHP3-208ENST00000490993 PHYHIPQ92561 330 aa6.79□□□□□ -1.32
NPHP3-208ENST00000490993 ZMYND19Q96E35 227 aaPredicted RBP6.79□□□□□ -1.32
NPHP3-208ENST00000490993 PRR14Q9BWN1 585 aa6.79□□□□□ -1.32
NPHP3-208ENST00000490993 INIPQ9NRY2 104 aa6.79□□□□□ -1.32
NPHP3-208ENST00000490993 FGF21Q9NSA1 209 aa6.79□□□□□ -1.32
NPHP3-208ENST00000490993 C14orf119Q9NWQ9 140 aa6.79□□□□□ -1.32
NPHP3-208ENST00000490993 TAS2R16Q9NYV7 291 aa6.79□□□□□ -1.32
NPHP3-208ENST00000490993 NXT1Q9UKK6 140 aaKnown RBP6.79□□□□□ -1.32
NPHP3-208ENST00000490993 CES1P1Q9UKY3 287 aa6.79□□□□□ -1.32
NPHP3-208ENST00000490993 KCNE3Q9Y6H6 103 aa6.79□□□□□ -1.32
NPHP3-208ENST00000490993 WASHC1A8K0Z3 465 aa6.79□□□□□ -1.32
NPHP3-208ENST00000490993 DSCR3O14972 297 aa6.79□□□□□ -1.32
NPHP3-208ENST00000490993 NARSO43776 548 aaKnown RBP6.79□□□□□ -1.32
NPHP3-208ENST00000490993 ERVK-25P63136 954 aa6.79□□□□□ -1.32
NPHP3-208ENST00000490993 PRICKLE4Q2TBC4 344 aa6.79□□□□□ -1.32
NPHP3-208ENST00000490993 RNLSQ5VYX0 342 aa6.79□□□□□ -1.32
NPHP3-208ENST00000490993 GLT8D1Q68CQ7 371 aa6.79□□□□□ -1.32
NPHP3-208ENST00000490993 FCRLBQ6BAA4 426 aa6.79□□□□□ -1.32
NPHP3-208ENST00000490993 HEPHL1Q6MZM0 1159 aa6.79□□□□□ -1.32
NPHP3-208ENST00000490993 FAM160A2Q8N612 972 aaPredicted RBP6.79□□□□□ -1.32
NPHP3-208ENST00000490993 SGCDQ92629 289 aa6.79□□□□□ -1.32
NPHP3-208ENST00000490993 DIO2Q92813 273 aa6.79□□□□□ -1.32
NPHP3-208ENST00000490993 C4orf36Q96KX1 117 aa6.79□□□□□ -1.32
NPHP3-208ENST00000490993 JSRP1Q96MG2 331 aaPredicted RBP6.79□□□□□ -1.32
NPHP3-208ENST00000490993 CRB3Q9BUF7 120 aa6.79□□□□□ -1.32
NPHP3-208ENST00000490993 TCEAL2Q9H3H9 227 aaPredicted RBP6.79□□□□□ -1.32
NPHP3-208ENST00000490993 MRPL39Q9NYK5 338 aaKnown RBP6.79□□□□□ -1.32
NPHP3-208ENST00000490993 TAS2R10Q9NYW0 307 aa6.79□□□□□ -1.32
NPHP3-208ENST00000490993 DKKL1Q9UK85 242 aa6.79□□□□□ -1.32
NPHP3-208ENST00000490993 TRIM64A6NGJ6 449 aa6.79□□□□□ -1.32
NPHP3-208ENST00000490993 EPOPA6NHQ4 379 aa6.79□□□□□ -1.32
NPHP3-208ENST00000490993 FAM183AA6NL82 134 aa6.79□□□□□ -1.32
NPHP3-208ENST00000490993 KDM4EB2RXH2 506 aaPredicted RBP6.79□□□□□ -1.32
NPHP3-208ENST00000490993 CDC40O60508 579 aaKnown RBP eCLIP6.79□□□□□ -1.32
NPHP3-208ENST00000490993 GATBO75879 557 aaKnown RBP6.79□□□□□ -1.32
NPHP3-208ENST00000490993 SNAPC5O75971 98 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms