RNA–Protein interactions for RNA: ENST00000490192.1

TM9SF3-206, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 4

Gene TM9SF3, Length 884 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-206ENST00000490192 ZNF670Q9BS34 389 aa5.27□□□□□ -1.57
TM9SF3-206ENST00000490192 ILKAPQ9H0C8 392 aaPredicted RBP5.27□□□□□ -1.57
TM9SF3-206ENST00000490192 PPA2Q9H2U2 334 aa5.27□□□□□ -1.57
TM9SF3-206ENST00000490192 PPDPFQ9H3Y8 114 aa5.27□□□□□ -1.57
TM9SF3-206ENST00000490192 NHEJ1Q9H9Q4 299 aaPredicted RBP5.27□□□□□ -1.57
TM9SF3-206ENST00000490192 CYP3A43Q9HB55 503 aa5.27□□□□□ -1.57
TM9SF3-206ENST00000490192 EXOSC3Q9NQT5 275 aaKnown RBP5.27□□□□□ -1.57
TM9SF3-206ENST00000490192 PAK1IP1Q9NWT1 392 aaPredicted RBP5.27□□□□□ -1.57
TM9SF3-206ENST00000490192 CACNG5Q9UF02 275 aa5.27□□□□□ -1.57
TM9SF3-206ENST00000490192 SLC2A6Q9UGQ3 507 aa5.27□□□□□ -1.57
TM9SF3-206ENST00000490192 NAP1L2Q9ULW6 460 aaPredicted RBP5.27□□□□□ -1.57
TM9SF3-206ENST00000490192 IGHV3OR16-12A0A075B7B8 117 aa5.26□□□□□ -1.57
TM9SF3-206ENST00000490192 A0A087X002 238 aa5.26□□□□□ -1.57
TM9SF3-206ENST00000490192 TEX46H3BTG2 121 aa5.26□□□□□ -1.57
TM9SF3-206ENST00000490192 NTN3O00634 580 aaPredicted RBP5.26□□□□□ -1.57
TM9SF3-206ENST00000490192 OR10H3O60404 316 aa5.26□□□□□ -1.57
TM9SF3-206ENST00000490192 ZFAND5O76080 213 aa5.26□□□□□ -1.57
TM9SF3-206ENST00000490192 LGI1O95970 557 aa5.26□□□□□ -1.57
TM9SF3-206ENST00000490192 SERPIND1P05546 499 aa5.26□□□□□ -1.57
TM9SF3-206ENST00000490192 UMPSP11172 480 aa5.26□□□□□ -1.57
TM9SF3-206ENST00000490192 IGFBP5P24593 272 aa5.26□□□□□ -1.57
TM9SF3-206ENST00000490192 FGF9P31371 208 aaPredicted RBP5.26□□□□□ -1.57
TM9SF3-206ENST00000490192 OTX1P32242 354 aaPredicted RBP5.26□□□□□ -1.57
TM9SF3-206ENST00000490192 ETV5P41161 510 aa5.26□□□□□ -1.57
TM9SF3-206ENST00000490192 GSCP56915 257 aaPredicted RBP5.26□□□□□ -1.57
TM9SF3-206ENST00000490192 RPL36AP83881 106 aaKnown RBP5.26□□□□□ -1.57
TM9SF3-206ENST00000490192 MRPL23Q16540 153 aaKnown RBP5.26□□□□□ -1.57
TM9SF3-206ENST00000490192 CNPY1Q3B7I2 92 aa5.26□□□□□ -1.57
TM9SF3-206ENST00000490192 RFWD3Q6PCD5 774 aa5.26□□□□□ -1.57
TM9SF3-206ENST00000490192 LRRC31Q6UY01 552 aa5.26□□□□□ -1.57
TM9SF3-206ENST00000490192 DCUN1D3Q8IWE4 304 aa5.26□□□□□ -1.57
TM9SF3-206ENST00000490192 FLVCR1-AS1Q8TAF5 88 aa5.26□□□□□ -1.57
TM9SF3-206ENST00000490192 ADAMTS16Q8TE57 1224 aa5.26□□□□□ -1.57
TM9SF3-206ENST00000490192 TAF15Q92804 592 aaKnown RBP eCLIP5.26□□□□□ -1.57
TM9SF3-206ENST00000490192 TMEM80Q96HE8 168 aa5.26□□□□□ -1.57
TM9SF3-206ENST00000490192 PPP1R16AQ96I34 528 aa5.26□□□□□ -1.57
TM9SF3-206ENST00000490192 PLEKHA8Q96JA3 519 aa5.26□□□□□ -1.57
TM9SF3-206ENST00000490192 C9orf85Q96MD7 179 aa5.26□□□□□ -1.57
TM9SF3-206ENST00000490192 ZNF641Q96N77 438 aaPredicted RBP5.26□□□□□ -1.57
TM9SF3-206ENST00000490192 CYP2S1Q96SQ9 504 aa5.26□□□□□ -1.57
TM9SF3-206ENST00000490192 CNN2Q99439 309 aaKnown RBP5.26□□□□□ -1.57
TM9SF3-206ENST00000490192 WACQ9BTA9 647 aa5.26□□□□□ -1.57
TM9SF3-206ENST00000490192 TM2D1Q9BX74 207 aa5.26□□□□□ -1.57
TM9SF3-206ENST00000490192 OCR1Q9BZK8 76 aa5.26□□□□□ -1.57
TM9SF3-206ENST00000490192 FGF22Q9HCT0 170 aa5.26□□□□□ -1.57
TM9SF3-206ENST00000490192 CUTCQ9NTM9 273 aa5.26□□□□□ -1.57
TM9SF3-206ENST00000490192 CFAP45Q9UL16 551 aa5.26□□□□□ -1.57
TM9SF3-206ENST00000490192 TRBV11-1A0A0K0K1C0 115 aa5.25□□□□□ -1.57
TM9SF3-206ENST00000490192 LINC00854A0A1B0GVQ3 168 aa5.25□□□□□ -1.57
TM9SF3-206ENST00000490192 VSTM2BA6NLU5 285 aa5.25□□□□□ -1.57
TM9SF3-206ENST00000490192 FOXI3A8MTJ6 420 aaPredicted RBP5.25□□□□□ -1.57
TM9SF3-206ENST00000490192 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.25□□□□□ -1.57
TM9SF3-206ENST00000490192 TRDCB7Z8K6 153 aa5.25□□□□□ -1.57
TM9SF3-206ENST00000490192 M0QX08 132 aa5.25□□□□□ -1.57
TM9SF3-206ENST00000490192 PRKYO43930 277 aa5.25□□□□□ -1.57
TM9SF3-206ENST00000490192 NEMFO60524 1076 aa5.25□□□□□ -1.57
TM9SF3-206ENST00000490192 FLOT1O75955 427 aa5.25□□□□□ -1.57
TM9SF3-206ENST00000490192 OR2F2O95006 317 aa5.25□□□□□ -1.57
TM9SF3-206ENST00000490192 MMP1P03956 469 aa5.25□□□□□ -1.57
TM9SF3-206ENST00000490192 ERCC1P07992 297 aaPredicted RBP5.25□□□□□ -1.57
TM9SF3-206ENST00000490192 CT62P0C5K7 136 aa5.25□□□□□ -1.57
TM9SF3-206ENST00000490192 HOXB6P17509 224 aaKnown RBP5.25□□□□□ -1.57
TM9SF3-206ENST00000490192 BCL3P20749 454 aa5.25□□□□□ -1.57
TM9SF3-206ENST00000490192 CPN2P22792 545 aa5.25□□□□□ -1.57
TM9SF3-206ENST00000490192 TUBG1P23258 451 aa5.25□□□□□ -1.57
TM9SF3-206ENST00000490192 YWHABP31946 246 aaKnown RBP5.25□□□□□ -1.57
TM9SF3-206ENST00000490192 XCR1P46094 333 aa5.25□□□□□ -1.57
TM9SF3-206ENST00000490192 ATP4BP51164 291 aa5.25□□□□□ -1.57
TM9SF3-206ENST00000490192 DAP3P51398 398 aaKnown RBP5.25□□□□□ -1.57
TM9SF3-206ENST00000490192 PRKXP51817 358 aa5.25□□□□□ -1.57
TM9SF3-206ENST00000490192 SLC8A3P57103 927 aa5.25□□□□□ -1.57
TM9SF3-206ENST00000490192 CALCOCO2Q13137 446 aa5.25□□□□□ -1.57
TM9SF3-206ENST00000490192 PPIL2Q13356 520 aa5.25□□□□□ -1.57
TM9SF3-206ENST00000490192 ZNF77Q15935 545 aa5.25□□□□□ -1.57
TM9SF3-206ENST00000490192 ISXQ2M1V0 245 aa5.25□□□□□ -1.57
TM9SF3-206ENST00000490192 ARMCX5Q6P1M9 558 aa5.25□□□□□ -1.57
TM9SF3-206ENST00000490192 SSX9Q7RTT3 188 aa5.25□□□□□ -1.57
TM9SF3-206ENST00000490192 SCD5Q86SK9 330 aa5.25□□□□□ -1.57
TM9SF3-206ENST00000490192 FBXL16Q8N461 479 aa5.25□□□□□ -1.57
TM9SF3-206ENST00000490192 BEST4Q8NFU0 473 aa5.25□□□□□ -1.57
TM9SF3-206ENST00000490192 OR4F6Q8NGB9 312 aa5.25□□□□□ -1.57
TM9SF3-206ENST00000490192 OR52H1Q8NGJ2 320 aa5.25□□□□□ -1.57
TM9SF3-206ENST00000490192 ACMSDQ8TDX5 336 aa5.25□□□□□ -1.57
TM9SF3-206ENST00000490192 NRGNQ92686 78 aa5.25□□□□□ -1.57
TM9SF3-206ENST00000490192 ZNF707Q96C28 371 aaPredicted RBP5.25□□□□□ -1.57
TM9SF3-206ENST00000490192 PRRC1Q96M27 445 aa5.25□□□□□ -1.57
TM9SF3-206ENST00000490192 RNF2Q99496 336 aa5.25□□□□□ -1.57
TM9SF3-206ENST00000490192 NAT10Q9H0A0 1025 aaKnown RBP5.25□□□□□ -1.57
TM9SF3-206ENST00000490192 STMN4Q9H169 189 aaPredicted RBP5.25□□□□□ -1.57
TM9SF3-206ENST00000490192 BLZF1Q9H2G9 400 aa5.25□□□□□ -1.57
TM9SF3-206ENST00000490192 SDF2L1Q9HCN8 221 aa5.25□□□□□ -1.57
TM9SF3-206ENST00000490192 TUBG2Q9NRH3 451 aa5.25□□□□□ -1.57
TM9SF3-206ENST00000490192 INPP5EQ9NRR6 644 aa5.25□□□□□ -1.57
TM9SF3-206ENST00000490192 PEF1Q9UBV8 284 aaKnown RBP5.25□□□□□ -1.57
TM9SF3-206ENST00000490192 ERVW-1Q9UQF0 538 aa5.25□□□□□ -1.57
TM9SF3-206ENST00000490192 RNF24Q9Y225 148 aa5.25□□□□□ -1.57
TM9SF3-206ENST00000490192 KIF2AO00139 706 aaPredicted RBP5.24□□□□□ -1.57
TM9SF3-206ENST00000490192 CLOCKO15516 846 aa5.24□□□□□ -1.57
TM9SF3-206ENST00000490192 OR2J3O76001 311 aa5.24□□□□□ -1.57
TM9SF3-206ENST00000490192 SEMA4FO95754 770 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms