RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 HSPA2P54652 639 aa3.07□□□□□ -1.92
CCDC39-206ENST00000489868 PDZK1IP1Q13113 114 aa3.07□□□□□ -1.92
CCDC39-206ENST00000489868 KLF17Q5JT82 389 aaPredicted RBP3.07□□□□□ -1.92
CCDC39-206ENST00000489868 GPRC6AQ5T6X5 926 aa3.07□□□□□ -1.92
CCDC39-206ENST00000489868 LCE1CQ5T751 118 aa3.07□□□□□ -1.92
CCDC39-206ENST00000489868 LCE1BQ5T7P3 118 aa3.07□□□□□ -1.92
CCDC39-206ENST00000489868 C1orf146Q5VVC0 180 aa3.07□□□□□ -1.92
CCDC39-206ENST00000489868 ARSKQ6UWY0 536 aa3.07□□□□□ -1.92
CCDC39-206ENST00000489868 PP632Q6XCG6 107 aa3.07□□□□□ -1.92
CCDC39-206ENST00000489868 KIAA1328Q86T90 577 aa3.07□□□□□ -1.92
CCDC39-206ENST00000489868 ZNF429Q86V71 674 aa3.07□□□□□ -1.92
CCDC39-206ENST00000489868 GRAMD2AQ8IUY3 354 aa3.07□□□□□ -1.92
CCDC39-206ENST00000489868 MDS2Q8NDY4 140 aa3.07□□□□□ -1.92
CCDC39-206ENST00000489868 STARD4Q96DR4 205 aa3.07□□□□□ -1.92
CCDC39-206ENST00000489868 C12orf66Q96MD2 445 aa3.07□□□□□ -1.92
CCDC39-206ENST00000489868 NAT10Q9H0A0 1025 aaKnown RBP3.07□□□□□ -1.92
CCDC39-206ENST00000489868 RHBGQ9H310 441 aa3.07□□□□□ -1.92
CCDC39-206ENST00000489868 ZNF385DQ9H6B1 395 aa3.07□□□□□ -1.92
CCDC39-206ENST00000489868 SIGLEC8Q9NYZ4 499 aa3.07□□□□□ -1.92
CCDC39-206ENST00000489868 ATP10DQ9P241 1426 aa3.07□□□□□ -1.92
CCDC39-206ENST00000489868 IGKV1D-8A0A087WSZ0 117 aa3.06□□□□□ -1.92
CCDC39-206ENST00000489868 G3V4G9 280 aa3.06□□□□□ -1.92
CCDC39-206ENST00000489868 CLDN5O00501 218 aa3.06□□□□□ -1.92
CCDC39-206ENST00000489868 MSH4O15457 936 aa3.06□□□□□ -1.92
CCDC39-206ENST00000489868 MAGEB4O15481 346 aaPredicted RBP3.06□□□□□ -1.92
CCDC39-206ENST00000489868 OR10H3O60404 316 aa3.06□□□□□ -1.92
CCDC39-206ENST00000489868 LGI1O95970 557 aa3.06□□□□□ -1.92
CCDC39-206ENST00000489868 ARF4P18085 180 aaPredicted RBP3.06□□□□□ -1.92
CCDC39-206ENST00000489868 LEPP41159 167 aa3.06□□□□□ -1.92
CCDC39-206ENST00000489868 KLK7P49862 253 aa3.06□□□□□ -1.92
CCDC39-206ENST00000489868 PLK1P53350 603 aa3.06□□□□□ -1.92
CCDC39-206ENST00000489868 RPS14P62263 151 aaKnown RBP3.06□□□□□ -1.92
CCDC39-206ENST00000489868 MAP2K1Q02750 393 aaPredicted RBP3.06□□□□□ -1.92
CCDC39-206ENST00000489868 ZNF763Q0D2J5 394 aa3.06□□□□□ -1.92
CCDC39-206ENST00000489868 C12orf60Q5U649 245 aa3.06□□□□□ -1.92
CCDC39-206ENST00000489868 CNSTQ6PJW8 725 aa3.06□□□□□ -1.92
CCDC39-206ENST00000489868 PNKDQ8N490 385 aa3.06□□□□□ -1.92
CCDC39-206ENST00000489868 RPL3LQ92901 407 aaKnown RBP3.06□□□□□ -1.92
CCDC39-206ENST00000489868 UCN3Q969E3 161 aa3.06□□□□□ -1.92
CCDC39-206ENST00000489868 MYLPFQ96A32 169 aa3.06□□□□□ -1.92
CCDC39-206ENST00000489868 TSG101Q99816 390 aa3.06□□□□□ -1.92
CCDC39-206ENST00000489868 RASL11BQ9BPW5 248 aa3.06□□□□□ -1.92
CCDC39-206ENST00000489868 WDR76Q9H967 626 aa3.06□□□□□ -1.92
CCDC39-206ENST00000489868 TREM2Q9NZC2 230 aa3.06□□□□□ -1.92
CCDC39-206ENST00000489868 ALG6Q9Y672 507 aa3.06□□□□□ -1.92
CCDC39-206ENST00000489868 IGHV3OR16-13A0A075B7E8 117 aa3.05□□□□□ -1.92
CCDC39-206ENST00000489868 A0A0G2JLM5 398 aa3.05□□□□□ -1.92
CCDC39-206ENST00000489868 PRDX3P30048 256 aaKnown RBP3.05□□□□□ -1.92
CCDC39-206ENST00000489868 HPCAL1P37235 193 aa3.05□□□□□ -1.92
CCDC39-206ENST00000489868 ACADVLP49748 655 aa3.05□□□□□ -1.92
CCDC39-206ENST00000489868 CCR6P51684 374 aa3.05□□□□□ -1.92
CCDC39-206ENST00000489868 TGFBR3Q03167 851 aa3.05□□□□□ -1.92
CCDC39-206ENST00000489868 MADCAM1Q13477 382 aa3.05□□□□□ -1.92
CCDC39-206ENST00000489868 NSUN5P1Q3KNT7 163 aa3.05□□□□□ -1.92
CCDC39-206ENST00000489868 ATL3Q6DD88 541 aa3.05□□□□□ -1.92
CCDC39-206ENST00000489868 CCDC137Q6PK04 289 aaKnown RBP3.05□□□□□ -1.92
CCDC39-206ENST00000489868 COX15Q7KZN9 410 aa3.05□□□□□ -1.92
CCDC39-206ENST00000489868 TPRA1Q86W33 373 aa3.05□□□□□ -1.92
CCDC39-206ENST00000489868 RALGPS2Q86X27 583 aaPredicted RBP3.05□□□□□ -1.92
CCDC39-206ENST00000489868 C6orf223Q8N319 242 aa3.05□□□□□ -1.92
CCDC39-206ENST00000489868 CATSPER1Q8NEC5 780 aa3.05□□□□□ -1.92
CCDC39-206ENST00000489868 C4orf36Q96KX1 117 aa3.05□□□□□ -1.92
CCDC39-206ENST00000489868 OR2M2Q96R28 347 aa3.05□□□□□ -1.92
CCDC39-206ENST00000489868 SPATA16Q9BXB7 569 aa3.05□□□□□ -1.92
CCDC39-206ENST00000489868 C6orf203Q9P0P8 240 aaPredicted RBP3.05□□□□□ -1.92
CCDC39-206ENST00000489868 PRPF19Q9UMS4 504 aaKnown RBP3.05□□□□□ -1.92
CCDC39-206ENST00000489868 PLEKHH1Q9ULM0 1364 aa3.04□□□□□ -1.92
CCDC39-206ENST00000489868 HELTA6NFD8 242 aa3.04□□□□□ -1.92
CCDC39-206ENST00000489868 UGT2B17O75795 530 aa3.04□□□□□ -1.92
CCDC39-206ENST00000489868 TNFSF13O75888 250 aa3.04□□□□□ -1.92
CCDC39-206ENST00000489868 CSF2P04141 144 aa3.04□□□□□ -1.92
CCDC39-206ENST00000489868 MAPK3P27361 379 aaPredicted RBP3.04□□□□□ -1.92
CCDC39-206ENST00000489868 PLA2G16P53816 162 aa3.04□□□□□ -1.92
CCDC39-206ENST00000489868 PAX5Q02548 391 aa3.04□□□□□ -1.92
CCDC39-206ENST00000489868 ARFRP1Q13795 201 aa3.04□□□□□ -1.92
CCDC39-206ENST00000489868 RABGAP1LQ5R372 815 aa3.04□□□□□ -1.92
CCDC39-206ENST00000489868 ZFP2Q6ZN57 461 aa3.04□□□□□ -1.92
CCDC39-206ENST00000489868 LRRC43Q8N309 656 aa3.04□□□□□ -1.92
CCDC39-206ENST00000489868 TMEM158Q8WZ71 300 aa3.04□□□□□ -1.92
CCDC39-206ENST00000489868 CCNL2Q96S94 520 aaPredicted RBP3.04□□□□□ -1.92
CCDC39-206ENST00000489868 VCPKMTQ9H867 229 aa3.04□□□□□ -1.92
CCDC39-206ENST00000489868 SLC25A22Q9H936 323 aa3.04□□□□□ -1.92
CCDC39-206ENST00000489868 GNG12Q9UBI6 72 aa3.04□□□□□ -1.92
CCDC39-206ENST00000489868 PSG11Q9UQ72 335 aa3.04□□□□□ -1.92
CCDC39-206ENST00000489868 CHMP2BQ9UQN3 213 aa3.04□□□□□ -1.92
CCDC39-206ENST00000489868 MFHAS1Q9Y4C4 1052 aa3.04□□□□□ -1.92
CCDC39-206ENST00000489868 SCN2AQ99250 2005 aa3.03□□□□□ -1.92
CCDC39-206ENST00000489868 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.03□□□□□ -1.92
CCDC39-206ENST00000489868 IGHV3-64DA0A0J9YX35 117 aa3.03□□□□□ -1.92
CCDC39-206ENST00000489868 RPS2P15880 293 aaKnown RBP3.03□□□□□ -1.92
CCDC39-206ENST00000489868 NT5EP21589 574 aa3.03□□□□□ -1.92
CCDC39-206ENST00000489868 PSMA2P25787 234 aa3.03□□□□□ -1.92
CCDC39-206ENST00000489868 NUCB2P80303 420 aa3.03□□□□□ -1.92
CCDC39-206ENST00000489868 MXD4Q14582 209 aaPredicted RBP3.03□□□□□ -1.92
CCDC39-206ENST00000489868 C1orf100Q5SVJ3 147 aa3.03□□□□□ -1.92
CCDC39-206ENST00000489868 PRSS41Q7RTY9 318 aa3.03□□□□□ -1.92
CCDC39-206ENST00000489868 TPRX1Q8N7U7 411 aa3.03□□□□□ -1.92
CCDC39-206ENST00000489868 KCNA7Q96RP8 456 aa3.03□□□□□ -1.92
CCDC39-206ENST00000489868 ZNF670Q9BS34 389 aa3.03□□□□□ -1.92
CCDC39-206ENST00000489868 ASF1AQ9Y294 204 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 285.2 ms