RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 NDUFA9Q16795 377 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 NKPD1Q17RQ9 610 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 C18orf21Q32NC0 220 aaPredicted RBP4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 ELOA3BQ3SY89 546 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 CRB2Q5IJ48 1285 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 PYY3Q5JQD4 70 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 EOGTQ5NDL2 527 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 THEM4Q5T1C6 240 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 ANXA8L1Q5VT79 327 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 LIPJQ5W064 366 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 OLFML2AQ68BL7 652 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 RAB12Q6IQ22 244 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 ADNP2Q6IQ32 1131 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 JMJD6Q6NYC1 403 aaPredicted RBP4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 ABHD17CQ6PCB6 329 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 B3GLCTQ6Y288 498 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 IL34Q6ZMJ4 242 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 GAREM2Q75VX8 874 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 SLC36A1Q7Z2H8 476 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 C6orf120Q7Z4R8 191 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 NUDT13Q86X67 352 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 C1QL4Q86Z23 238 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 NXPE1Q8N323 547 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 LRRC52Q8N7C0 313 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 ZFP41Q8N8Y5 198 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 TEX19Q8NA77 164 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 ELOA3Q8NG57 546 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 OR4F15Q8NGB8 312 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 OR5T3Q8NGG3 340 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 OR4Q3Q8NH05 313 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 ZNF461Q8TAF7 563 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 STOML3Q8TAV4 291 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 CSGALNACT1Q8TDX6 532 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 HASPINQ8TF76 798 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 BRI3BPQ8WY22 251 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 TFGQ92734 400 aaPredicted RBP4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 MAL2Q969L2 176 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 SLC25A28Q96A46 364 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 C3orf49Q96BT1 292 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 S100PBPQ96BU1 408 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 FUBP3Q96I24 572 aaKnown RBP eCLIP4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 OR1F2PQ96R84 312 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 ACPTQ9BZG2 426 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 SEC61A2Q9H9S3 476 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 TREM1Q9NP99 234 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 ACKR4Q9NPB9 350 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 TMEM100Q9NV29 134 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 DDIT4Q9NX09 232 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 RCC2Q9P258 522 aaKnown RBP4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 FBXL4Q9UKA2 621 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 ADAMTS5Q9UNA0 930 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 WASF3Q9UPY6 502 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 TMEM184BQ9Y519 407 aaPredicted RBP4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 TRPV2Q9Y5S1 764 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 SNX10Q9Y5X0 201 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 NUP214P35658 2090 aaPredicted RBP4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 TNRC18O15417 2968 aaPredicted RBP4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 A0A0G2JK05 382 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 KRTAP4-8A0A0G2JLE6 195 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 TRBC2A0A5B9 178 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 C1orf226A1L170 272 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 LOC730098B7Z3J9 87 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 ANHXE9PGG2 379 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 MKRN2OSH3BPM6 223 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 TAPBPO15533 448 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 FFAR2O15552 330 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 BCL2L11O43521 198 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 RNF13O43567 381 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 NDUFB6O95139 128 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 LRATO95237 230 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 WISP1O95388 367 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 C6orf47O95873 294 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 IFNA17P01571 189 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 FGF1P05230 155 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 ANXA2P07355 339 aaKnown RBP4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 MMP2P08253 660 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 IGFBP1P08833 259 aaPredicted RBP4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 MMP10P09238 476 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 TXNP10599 105 aaKnown RBP4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 EPXP11678 715 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 SLC25A4P12235 298 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 INSRRP14616 1297 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 RAB5AP20339 215 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 GLP1RP43220 463 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 ANXA11P50995 505 aaKnown RBP4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 DGKEP52429 567 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 AKR1C2P52895 323 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 ADPRHP54922 357 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 FKBP1AP62942 108 aaKnown RBP4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 CDK5Q00535 292 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 AKR1C1Q04828 323 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 PJVKQ0ZLH3 352 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 SKP2Q13309 424 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 PIN1Q13526 163 aaPredicted RBP4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 INPP5JQ15735 1006 aaPredicted RBP4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 MAPK14Q16539 360 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 AARDQ4LEZ3 155 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 AKIRIN2Q53H80 203 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 TRIM61Q5EBN2 209 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 SLC35D3Q5M8T2 416 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms