RNA–Protein interactions for RNA: ENST00000489451.1

ACTN4-206, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-206ENST00000489451 TMEM120BA0PK00 339 aa10.38□□□□□ -0.75
ACTN4-206ENST00000489451 PRAMEF27A3QJZ7 478 aa10.38□□□□□ -0.75
ACTN4-206ENST00000489451 GOLGA8OA6NCC3 632 aa10.38□□□□□ -0.75
ACTN4-206ENST00000489451 GJE1A6NN92 205 aa10.38□□□□□ -0.75
ACTN4-206ENST00000489451 GOLGA8NF8WBI6 632 aa10.38□□□□□ -0.75
ACTN4-206ENST00000489451 EIF4E2O60573 245 aaKnown RBP10.38□□□□□ -0.75
ACTN4-206ENST00000489451 SCN2BO60939 215 aa10.38□□□□□ -0.75
ACTN4-206ENST00000489451 PGM3O95394 542 aa10.38□□□□□ -0.75
ACTN4-206ENST00000489451 G6PDP11413 515 aa10.38□□□□□ -0.75
ACTN4-206ENST00000489451 UBL4AP11441 157 aa10.38□□□□□ -0.75
ACTN4-206ENST00000489451 PTNP21246 168 aa10.38□□□□□ -0.75
ACTN4-206ENST00000489451 SLC18A1P54219 525 aa10.38□□□□□ -0.75
ACTN4-206ENST00000489451 CASP9P55211 416 aa10.38□□□□□ -0.75
ACTN4-206ENST00000489451 FOXG1P55316 489 aaPredicted RBP10.38□□□□□ -0.75
ACTN4-206ENST00000489451 SESN3P58005 492 aa10.38□□□□□ -0.75
ACTN4-206ENST00000489451 PHC1P78364 1004 aa10.38□□□□□ -0.75
ACTN4-206ENST00000489451 SPOCK1Q08629 439 aa10.38□□□□□ -0.75
ACTN4-206ENST00000489451 FAPQ12884 760 aa10.38□□□□□ -0.75
ACTN4-206ENST00000489451 P2RY6Q15077 328 aa10.38□□□□□ -0.75
ACTN4-206ENST00000489451 PDCD2Q16342 344 aaPredicted RBP10.38□□□□□ -0.75
ACTN4-206ENST00000489451 SMU1Q2TAY7 513 aa10.38□□□□□ -0.75
ACTN4-206ENST00000489451 TIGD2Q4W5G0 525 aa10.38□□□□□ -0.75
ACTN4-206ENST00000489451 HEPHL1Q6MZM0 1159 aa10.38□□□□□ -0.75
ACTN4-206ENST00000489451 DTX2Q86UW9 622 aa10.38□□□□□ -0.75
ACTN4-206ENST00000489451 SLC43A2Q8N370 569 aa10.38□□□□□ -0.75
ACTN4-206ENST00000489451 TMCO5AQ8N6Q1 288 aa10.38□□□□□ -0.75
ACTN4-206ENST00000489451 HSD17B8Q92506 261 aa10.38□□□□□ -0.75
ACTN4-206ENST00000489451 REXO5Q96IC2 774 aaKnown RBP10.38□□□□□ -0.75
ACTN4-206ENST00000489451 OR5B2Q96R09 309 aa10.38□□□□□ -0.75
ACTN4-206ENST00000489451 THUMPD3Q9BV44 507 aaKnown RBP10.38□□□□□ -0.75
ACTN4-206ENST00000489451 DUSP26Q9BV47 211 aa10.38□□□□□ -0.75
ACTN4-206ENST00000489451 REG4Q9BYZ8 158 aa10.38□□□□□ -0.75
ACTN4-206ENST00000489451 NMUR2Q9GZQ4 415 aa10.38□□□□□ -0.75
ACTN4-206ENST00000489451 LAT2Q9GZY6 243 aa10.38□□□□□ -0.75
ACTN4-206ENST00000489451 ESRP2Q9H6T0 727 aaKnown RBP10.38□□□□□ -0.75
ACTN4-206ENST00000489451 FANCFQ9NPI8 374 aa10.38□□□□□ -0.75
ACTN4-206ENST00000489451 TIGARQ9NQ88 270 aa10.38□□□□□ -0.75
ACTN4-206ENST00000489451 NOP53Q9NZM5 478 aaKnown RBP10.38□□□□□ -0.75
ACTN4-206ENST00000489451 KLHL9Q9P2J3 617 aa10.38□□□□□ -0.75
ACTN4-206ENST00000489451 FAF1Q9UNN5 650 aaPredicted RBP10.38□□□□□ -0.75
ACTN4-206ENST00000489451 ALPK2Q86TB3 2170 aa10.38□□□□□ -0.75
ACTN4-206ENST00000489451 PLCE1Q9P212 2302 aa10.38□□□□□ -0.75
ACTN4-206ENST00000489451 ZNF716A6NP11 495 aa10.37□□□□□ -0.75
ACTN4-206ENST00000489451 ZNF724A8MTY0 619 aa10.37□□□□□ -0.75
ACTN4-206ENST00000489451 H3BNH8 94 aa10.37□□□□□ -0.75
ACTN4-206ENST00000489451 GTPBP1O00178 669 aaKnown RBP10.37□□□□□ -0.75
ACTN4-206ENST00000489451 ITM2AO43736 263 aa10.37□□□□□ -0.75
ACTN4-206ENST00000489451 FESP07332 822 aa10.37□□□□□ -0.75
ACTN4-206ENST00000489451 BGNP21810 368 aa10.37□□□□□ -0.75
ACTN4-206ENST00000489451 SOAT1P35610 550 aa10.37□□□□□ -0.75
ACTN4-206ENST00000489451 PGM1P36871 562 aa10.37□□□□□ -0.75
ACTN4-206ENST00000489451 DIO1P49895 249 aa10.37□□□□□ -0.75
ACTN4-206ENST00000489451 CCR4P51679 360 aa10.37□□□□□ -0.75
ACTN4-206ENST00000489451 CLDN8P56748 225 aa10.37□□□□□ -0.75
ACTN4-206ENST00000489451 MAGOHP61326 146 aaKnown RBP10.37□□□□□ -0.75
ACTN4-206ENST00000489451 EMX2Q04743 252 aa10.37□□□□□ -0.75
ACTN4-206ENST00000489451 DMTNQ08495 405 aa10.37□□□□□ -0.75
ACTN4-206ENST00000489451 RASGEF1BQ0VAM2 473 aa10.37□□□□□ -0.75
ACTN4-206ENST00000489451 CBFBQ13951 182 aa10.37□□□□□ -0.75
ACTN4-206ENST00000489451 MPP2Q14168 576 aa10.37□□□□□ -0.75
ACTN4-206ENST00000489451 GPR68Q15743 365 aa10.37□□□□□ -0.75
ACTN4-206ENST00000489451 LSM12Q3MHD2 195 aaKnown RBP10.37□□□□□ -0.75
ACTN4-206ENST00000489451 SPDYE7PQ495Y7 208 aa10.37□□□□□ -0.75
ACTN4-206ENST00000489451 ATG16L1Q676U5 607 aa10.37□□□□□ -0.75
ACTN4-206ENST00000489451 OR4F3Q6IEY1 312 aa10.37□□□□□ -0.75
ACTN4-206ENST00000489451 C11orf71Q6IPW1 123 aa10.37□□□□□ -0.75
ACTN4-206ENST00000489451 C3orf33Q6P1S2 294 aa10.37□□□□□ -0.75
ACTN4-206ENST00000489451 PODNL1Q6PEZ8 512 aa10.37□□□□□ -0.75
ACTN4-206ENST00000489451 B3GLCTQ6Y288 498 aa10.37□□□□□ -0.75
ACTN4-206ENST00000489451 C6orf120Q7Z4R8 191 aa10.37□□□□□ -0.75
ACTN4-206ENST00000489451 HMGN2P46Q86SG4 172 aa10.37□□□□□ -0.75
ACTN4-206ENST00000489451 ZNF433Q8N7K0 673 aaPredicted RBP10.37□□□□□ -0.75
ACTN4-206ENST00000489451 ZNF781Q8N8C0 355 aa10.37□□□□□ -0.75
ACTN4-206ENST00000489451 TOR1AIP2Q8NFQ8 470 aa10.37□□□□□ -0.75
ACTN4-206ENST00000489451 ZG16BQ96DA0 208 aa10.37□□□□□ -0.75
ACTN4-206ENST00000489451 DNAJA3Q96EY1 480 aa10.37□□□□□ -0.75
ACTN4-206ENST00000489451 ARL5BQ96KC2 179 aa10.37□□□□□ -0.75
ACTN4-206ENST00000489451 C20orf27Q9GZN8 174 aa10.37□□□□□ -0.75
ACTN4-206ENST00000489451 ARGLU1Q9NWB6 273 aaPredicted RBP10.37□□□□□ -0.75
ACTN4-206ENST00000489451 MKLN1Q9UL63 735 aa10.37□□□□□ -0.75
ACTN4-206ENST00000489451 IGKV3D-15A0A087WSY6 115 aa10.36□□□□□ -0.75
ACTN4-206ENST00000489451 RNF103-CHMP3A0A140T963 221 aa10.36□□□□□ -0.75
ACTN4-206ENST00000489451 A0A1W2PP18 115 aa10.36□□□□□ -0.75
ACTN4-206ENST00000489451 CLDN24A6NM45 220 aa10.36□□□□□ -0.75
ACTN4-206ENST00000489451 E7EQL1 145 aa10.36□□□□□ -0.75
ACTN4-206ENST00000489451 ANKRD28O15084 1053 aa10.36□□□□□ -0.75
ACTN4-206ENST00000489451 KIAA0513O60268 411 aa10.36□□□□□ -0.75
ACTN4-206ENST00000489451 IFNA2P01563 188 aa10.36□□□□□ -0.75
ACTN4-206ENST00000489451 IGHV3-9P01782 118 aa10.36□□□□□ -0.75
ACTN4-206ENST00000489451 KRT16P08779 473 aa10.36□□□□□ -0.75
ACTN4-206ENST00000489451 UBTFL6P0CB48 400 aaPredicted RBP10.36□□□□□ -0.75
ACTN4-206ENST00000489451 MATN1P21941 496 aa10.36□□□□□ -0.75
ACTN4-206ENST00000489451 SLC7A1P30825 629 aa10.36□□□□□ -0.75
ACTN4-206ENST00000489451 IRX1P78414 480 aaPredicted RBP10.36□□□□□ -0.75
ACTN4-206ENST00000489451 CASP8Q14790 479 aa10.36□□□□□ -0.75
ACTN4-206ENST00000489451 PPA1Q15181 289 aa10.36□□□□□ -0.75
ACTN4-206ENST00000489451 STK11Q15831 433 aa10.36□□□□□ -0.75
ACTN4-206ENST00000489451 ETFDHQ16134 617 aa10.36□□□□□ -0.75
ACTN4-206ENST00000489451 ARHGAP11BQ3KRB8 267 aa10.36□□□□□ -0.75
ACTN4-206ENST00000489451 SYT14P1Q58G82 188 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms