RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 DEFB124Q8NES8 71 aa7.8□□□□□ -1.16
VTI1A-207ENST00000489357 OR52R1Q8NGF1 315 aa7.8□□□□□ -1.16
VTI1A-207ENST00000489357 OR9A4Q8NGU2 314 aa7.8□□□□□ -1.16
VTI1A-207ENST00000489357 OR4C6Q8NH72 309 aa7.8□□□□□ -1.16
VTI1A-207ENST00000489357 DNAJA4Q8WW22 397 aaPredicted RBP7.8□□□□□ -1.16
VTI1A-207ENST00000489357 PIK3R3Q92569 461 aa7.8□□□□□ -1.16
VTI1A-207ENST00000489357 CCDC74AQ96AQ1 378 aa7.8□□□□□ -1.16
VTI1A-207ENST00000489357 HSPBAP1Q96EW2 488 aa7.8□□□□□ -1.16
VTI1A-207ENST00000489357 FAM46AQ96IP4 442 aaKnown RBP7.8□□□□□ -1.16
VTI1A-207ENST00000489357 ART5Q96L15 291 aa7.8□□□□□ -1.16
VTI1A-207ENST00000489357 VSTM2LQ96N03 204 aa7.8□□□□□ -1.16
VTI1A-207ENST00000489357 OR5M11Q96RB7 305 aa7.8□□□□□ -1.16
VTI1A-207ENST00000489357 CDC6Q99741 560 aa7.8□□□□□ -1.16
VTI1A-207ENST00000489357 GPA33Q99795 319 aa7.8□□□□□ -1.16
VTI1A-207ENST00000489357 PRSS27Q9BQR3 290 aa7.8□□□□□ -1.16
VTI1A-207ENST00000489357 CCDC32Q9BV29 185 aa7.8□□□□□ -1.16
VTI1A-207ENST00000489357 CDADC1Q9BWV3 514 aa7.8□□□□□ -1.16
VTI1A-207ENST00000489357 SP140LQ9H930 580 aa7.8□□□□□ -1.16
VTI1A-207ENST00000489357 FOLH1BQ9HBA9 442 aa7.8□□□□□ -1.16
VTI1A-207ENST00000489357 ZBTB20Q9HC78 741 aaPredicted RBP7.8□□□□□ -1.16
VTI1A-207ENST00000489357 CPNE5Q9HCH3 593 aa7.8□□□□□ -1.16
VTI1A-207ENST00000489357 FAM60AQ9NP50 221 aa7.8□□□□□ -1.16
VTI1A-207ENST00000489357 PRTFDC1Q9NRG1 225 aa7.8□□□□□ -1.16
VTI1A-207ENST00000489357 SIDT1Q9NXL6 827 aaKnown RBP7.8□□□□□ -1.16
VTI1A-207ENST00000489357 H2AFY2Q9P0M6 372 aaPredicted RBP7.8□□□□□ -1.16
VTI1A-207ENST00000489357 MRTO4Q9UKD2 239 aaKnown RBP7.8□□□□□ -1.16
VTI1A-207ENST00000489357 WASF3Q9UPY6 502 aa7.8□□□□□ -1.16
VTI1A-207ENST00000489357 SLC35A3Q9Y2D2 325 aa7.8□□□□□ -1.16
VTI1A-207ENST00000489357 PMF1-BGLAPU3KQ54 211 aa7.8□□□□□ -1.16
VTI1A-207ENST00000489357 ACACBO00763 2458 aa7.8□□□□□ -1.16
VTI1A-207ENST00000489357 A0A0B4J2E0 115 aa7.79□□□□□ -1.16
VTI1A-207ENST00000489357 A0A1B0GX12 115 aa7.79□□□□□ -1.16
VTI1A-207ENST00000489357 SLC22A31A6NKX4 558 aa7.79□□□□□ -1.16
VTI1A-207ENST00000489357 GNB5O14775 395 aa7.79□□□□□ -1.16
VTI1A-207ENST00000489357 POLR1CO15160 346 aaPredicted RBP7.79□□□□□ -1.16
VTI1A-207ENST00000489357 LYPD3O95274 346 aa7.79□□□□□ -1.16
VTI1A-207ENST00000489357 THY1P04216 161 aa7.79□□□□□ -1.16
VTI1A-207ENST00000489357 HBQ1P09105 142 aa7.79□□□□□ -1.16
VTI1A-207ENST00000489357 TYRP1P17643 537 aa7.79□□□□□ -1.16
VTI1A-207ENST00000489357 NR4A1P22736 598 aa7.79□□□□□ -1.16
VTI1A-207ENST00000489357 GABRA5P31644 462 aa7.79□□□□□ -1.16
VTI1A-207ENST00000489357 RORCP51449 518 aa7.79□□□□□ -1.16
VTI1A-207ENST00000489357 ATP12AP54707 1039 aa7.79□□□□□ -1.16
VTI1A-207ENST00000489357 GAS1P54826 345 aa7.79□□□□□ -1.16
VTI1A-207ENST00000489357 DCAF7P61962 342 aa7.79□□□□□ -1.16
VTI1A-207ENST00000489357 LSM3P62310 102 aaKnown RBP7.79□□□□□ -1.16
VTI1A-207ENST00000489357 HSD11B2P80365 405 aa7.79□□□□□ -1.16
VTI1A-207ENST00000489357 RUNX1T1Q06455 604 aa7.79□□□□□ -1.16
VTI1A-207ENST00000489357 CDC20Q12834 499 aa7.79□□□□□ -1.16
VTI1A-207ENST00000489357 TRAM1Q15629 374 aa7.79□□□□□ -1.16
VTI1A-207ENST00000489357 SSX1Q16384 188 aa7.79□□□□□ -1.16
VTI1A-207ENST00000489357 TRIM16LQ309B1 348 aa7.79□□□□□ -1.16
VTI1A-207ENST00000489357 SPANXN2Q5MJ10 180 aa7.79□□□□□ -1.16
VTI1A-207ENST00000489357 ARHGAP11AQ6P4F7 1023 aa7.79□□□□□ -1.16
VTI1A-207ENST00000489357 ULK3Q6PHR2 472 aa7.79□□□□□ -1.16
VTI1A-207ENST00000489357 TMPRSS11AQ6ZMR5 421 aa7.79□□□□□ -1.16
VTI1A-207ENST00000489357 RTL4Q6ZR62 310 aa7.79□□□□□ -1.16
VTI1A-207ENST00000489357 PLXDC1Q8IUK5 500 aa7.79□□□□□ -1.16
VTI1A-207ENST00000489357 CACTIN-AS1Q8N1I8 211 aa7.79□□□□□ -1.16
VTI1A-207ENST00000489357 CENPSQ8N2Z9 138 aa7.79□□□□□ -1.16
VTI1A-207ENST00000489357 ZNF527Q8NB42 609 aa7.79□□□□□ -1.16
VTI1A-207ENST00000489357 TMEM52Q8NDY8 209 aa7.79□□□□□ -1.16
VTI1A-207ENST00000489357 OR5T3Q8NGG3 340 aa7.79□□□□□ -1.16
VTI1A-207ENST00000489357 OR8D4Q8NGM9 314 aa7.79□□□□□ -1.16
VTI1A-207ENST00000489357 FANK1Q8TC84 345 aa7.79□□□□□ -1.16
VTI1A-207ENST00000489357 LMX1AQ8TE12 382 aa7.79□□□□□ -1.16
VTI1A-207ENST00000489357 TMEM255BQ8WV15 326 aa7.79□□□□□ -1.16
VTI1A-207ENST00000489357 AP3S1Q92572 193 aa7.79□□□□□ -1.16
VTI1A-207ENST00000489357 UFD1Q92890 307 aa7.79□□□□□ -1.16
VTI1A-207ENST00000489357 BPIFA2Q96DR5 249 aa7.79□□□□□ -1.16
VTI1A-207ENST00000489357 RNFT2Q96EX2 444 aa7.79□□□□□ -1.16
VTI1A-207ENST00000489357 WDFY2Q96P53 400 aa7.79□□□□□ -1.16
VTI1A-207ENST00000489357 CHCHD6Q9BRQ6 235 aa7.79□□□□□ -1.16
VTI1A-207ENST00000489357 ALOXE3Q9BYJ1 711 aa7.79□□□□□ -1.16
VTI1A-207ENST00000489357 PLA2G12AQ9BZM1 189 aa7.79□□□□□ -1.16
VTI1A-207ENST00000489357 KLHL25Q9H0H3 589 aa7.79□□□□□ -1.16
VTI1A-207ENST00000489357 OR51E2Q9H255 320 aa7.79□□□□□ -1.16
VTI1A-207ENST00000489357 UBQLN3Q9H347 655 aa7.79□□□□□ -1.16
VTI1A-207ENST00000489357 EGLN3Q9H6Z9 239 aa7.79□□□□□ -1.16
VTI1A-207ENST00000489357 ANKRA2Q9H9E1 313 aa7.79□□□□□ -1.16
VTI1A-207ENST00000489357 EXOSC3Q9NQT5 275 aaKnown RBP7.79□□□□□ -1.16
VTI1A-207ENST00000489357 CMC2Q9NRP2 79 aa7.79□□□□□ -1.16
VTI1A-207ENST00000489357 ASB6Q9NWX5 421 aa7.79□□□□□ -1.16
VTI1A-207ENST00000489357 HAO2Q9NYQ3 351 aa7.79□□□□□ -1.16
VTI1A-207ENST00000489357 CNIH4Q9P003 139 aa7.79□□□□□ -1.16
VTI1A-207ENST00000489357 POLHQ9Y253 713 aa7.79□□□□□ -1.16
VTI1A-207ENST00000489357 TRAPPC4Q9Y296 219 aa7.79□□□□□ -1.16
VTI1A-207ENST00000489357 GSTK1Q9Y2Q3 226 aa7.79□□□□□ -1.16
VTI1A-207ENST00000489357 CAB39Q9Y376 341 aaPredicted RBP7.79□□□□□ -1.16
VTI1A-207ENST00000489357 CORINQ9Y5Q5 1042 aa7.79□□□□□ -1.16
VTI1A-207ENST00000489357 CEP295Q9C0D2 2601 aa7.78□□□□□ -1.16
VTI1A-207ENST00000489357 A0A0A6YYC8 382 aaPredicted RBP7.78□□□□□ -1.16
VTI1A-207ENST00000489357 LOC100506127A0A0U1RQW1 187 aa7.78□□□□□ -1.16
VTI1A-207ENST00000489357 RHPN2P1A8MT19 583 aa7.78□□□□□ -1.16
VTI1A-207ENST00000489357 I3L1I5 382 aaPredicted RBP7.78□□□□□ -1.16
VTI1A-207ENST00000489357 J3QRK9 145 aa7.78□□□□□ -1.16
VTI1A-207ENST00000489357 M0R129 80 aa7.78□□□□□ -1.16
VTI1A-207ENST00000489357 BHLHE40O14503 412 aa7.78□□□□□ -1.16
VTI1A-207ENST00000489357 DSCR3O14972 297 aa7.78□□□□□ -1.16
VTI1A-207ENST00000489357 SIGLEC6O43699 453 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms