RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 RANBP9Q96S59 729 aa3.32□□□□□ -1.88
XRN1-213ENST00000489241 ELOVL4Q9GZR5 314 aa3.32□□□□□ -1.88
XRN1-213ENST00000489241 NAT10Q9H0A0 1025 aaKnown RBP3.32□□□□□ -1.88
XRN1-213ENST00000489241 GLT8D2Q9H1C3 349 aa3.32□□□□□ -1.88
XRN1-213ENST00000489241 YY1AP1Q9H869 796 aa3.32□□□□□ -1.88
XRN1-213ENST00000489241 B3GNT2Q9NY97 397 aa3.32□□□□□ -1.88
XRN1-213ENST00000489241 SPRR3Q9UBC9 169 aa3.32□□□□□ -1.88
XRN1-213ENST00000489241 PRPF19Q9UMS4 504 aaKnown RBP3.32□□□□□ -1.88
XRN1-213ENST00000489241 NPTNQ9Y639 398 aa3.32□□□□□ -1.88
XRN1-213ENST00000489241 COL5A2P05997 1499 aaPredicted RBP3.31□□□□□ -1.88
XRN1-213ENST00000489241 A0A1W2PPE3 182 aa3.31□□□□□ -1.88
XRN1-213ENST00000489241 VSTM2BA6NLU5 285 aa3.31□□□□□ -1.88
XRN1-213ENST00000489241 ZNF705EA8MWA4 302 aaPredicted RBP3.31□□□□□ -1.88
XRN1-213ENST00000489241 B4DXG7 233 aa3.31□□□□□ -1.88
XRN1-213ENST00000489241 POLR2DO15514 142 aaKnown RBP3.31□□□□□ -1.88
XRN1-213ENST00000489241 PHF1O43189 567 aaPredicted RBP3.31□□□□□ -1.88
XRN1-213ENST00000489241 CXCL13O43927 109 aa3.31□□□□□ -1.88
XRN1-213ENST00000489241 UPK3AO75631 287 aa3.31□□□□□ -1.88
XRN1-213ENST00000489241 CLDN9O95484 217 aa3.31□□□□□ -1.88
XRN1-213ENST00000489241 AP2A1O95782 977 aa3.31□□□□□ -1.88
XRN1-213ENST00000489241 SLC35E2P0CK97 266 aa3.31□□□□□ -1.88
XRN1-213ENST00000489241 CCDC130P13994 396 aa3.31□□□□□ -1.88
XRN1-213ENST00000489241 CCNCP24863 283 aa3.31□□□□□ -1.88
XRN1-213ENST00000489241 GNA11P29992 359 aa3.31□□□□□ -1.88
XRN1-213ENST00000489241 CCR1P32246 355 aa3.31□□□□□ -1.88
XRN1-213ENST00000489241 QARSP47897 775 aaKnown RBP3.31□□□□□ -1.88
XRN1-213ENST00000489241 TPMTP51580 245 aa3.31□□□□□ -1.88
XRN1-213ENST00000489241 EFNA3P52797 238 aa3.31□□□□□ -1.88
XRN1-213ENST00000489241 RIPK4P57078 832 aa3.31□□□□□ -1.88
XRN1-213ENST00000489241 MRPL28Q13084 256 aaKnown RBP3.31□□□□□ -1.88
XRN1-213ENST00000489241 RUNX3Q13761 415 aa3.31□□□□□ -1.88
XRN1-213ENST00000489241 VGLL4Q14135 290 aa3.31□□□□□ -1.88
XRN1-213ENST00000489241 TRIM16LQ309B1 348 aa3.31□□□□□ -1.88
XRN1-213ENST00000489241 SLC22A6Q4U2R8 563 aa3.31□□□□□ -1.88
XRN1-213ENST00000489241 ARMC12Q5T9G4 340 aa3.31□□□□□ -1.88
XRN1-213ENST00000489241 KDM7AQ6ZMT4 941 aa3.31□□□□□ -1.88
XRN1-213ENST00000489241 SERINC5Q86VE9 423 aa3.31□□□□□ -1.88
XRN1-213ENST00000489241 ECHDC2Q86YB7 292 aa3.31□□□□□ -1.88
XRN1-213ENST00000489241 EGFL6Q8IUX8 553 aa3.31□□□□□ -1.88
XRN1-213ENST00000489241 TTC5Q8N0Z6 440 aa3.31□□□□□ -1.88
XRN1-213ENST00000489241 FAM83FQ8NEG4 500 aaPredicted RBP3.31□□□□□ -1.88
XRN1-213ENST00000489241 CCDC26Q8TAB7 109 aa3.31□□□□□ -1.88
XRN1-213ENST00000489241 FAM110BQ8TC76 370 aa3.31□□□□□ -1.88
XRN1-213ENST00000489241 MAGEE2Q8TD90 523 aaPredicted RBP3.31□□□□□ -1.88
XRN1-213ENST00000489241 ST8SIA1Q92185 356 aa3.31□□□□□ -1.88
XRN1-213ENST00000489241 UBE2E3Q969T4 207 aa3.31□□□□□ -1.88
XRN1-213ENST00000489241 ANKRD9Q96BM1 317 aaPredicted RBP3.31□□□□□ -1.88
XRN1-213ENST00000489241 TIMD4Q96H15 378 aa3.31□□□□□ -1.88
XRN1-213ENST00000489241 IL4I1Q96RQ9 567 aa3.31□□□□□ -1.88
XRN1-213ENST00000489241 MCHR1Q99705 422 aa3.31□□□□□ -1.88
XRN1-213ENST00000489241 PYGO2Q9BRQ0 406 aa3.31□□□□□ -1.88
XRN1-213ENST00000489241 TRIM62Q9BVG3 475 aa3.31□□□□□ -1.88
XRN1-213ENST00000489241 SMYD3Q9H7B4 428 aa3.31□□□□□ -1.88
XRN1-213ENST00000489241 CLEC5AQ9NY25 188 aa3.31□□□□□ -1.88
XRN1-213ENST00000489241 ZNF581Q9P0T4 197 aa3.31□□□□□ -1.88
XRN1-213ENST00000489241 PISDQ9UG56 409 aa3.31□□□□□ -1.88
XRN1-213ENST00000489241 WARS2Q9UGM6 360 aaKnown RBP3.31□□□□□ -1.88
XRN1-213ENST00000489241 TMED5Q9Y3A6 229 aa3.31□□□□□ -1.88
XRN1-213ENST00000489241 ANKRD30BQ9BXX2 1392 aa3.3□□□□□ -1.88
XRN1-213ENST00000489241 A0A1B0GWB2 263 aa3.3□□□□□ -1.88
XRN1-213ENST00000489241 SRRM5B3KS81 715 aa3.3□□□□□ -1.88
XRN1-213ENST00000489241 SULT2B1O00204 365 aa3.3□□□□□ -1.88
XRN1-213ENST00000489241 HAS3O00219 553 aa3.3□□□□□ -1.88
XRN1-213ENST00000489241 RGS16O15492 202 aaPredicted RBP3.3□□□□□ -1.88
XRN1-213ENST00000489241 OR10H3O60404 316 aa3.3□□□□□ -1.88
XRN1-213ENST00000489241 PFKFB2O60825 505 aa3.3□□□□□ -1.88
XRN1-213ENST00000489241 CABYRO75952 493 aa3.3□□□□□ -1.88
XRN1-213ENST00000489241 ATP5LO75964 103 aa3.3□□□□□ -1.88
XRN1-213ENST00000489241 LYPD3O95274 346 aa3.3□□□□□ -1.88
XRN1-213ENST00000489241 GNA14O95837 355 aa3.3□□□□□ -1.88
XRN1-213ENST00000489241 ZNF853P0CG23 659 aa3.3□□□□□ -1.88
XRN1-213ENST00000489241 FOLR2P14207 255 aa3.3□□□□□ -1.88
XRN1-213ENST00000489241 ATP1B2P14415 290 aaPredicted RBP3.3□□□□□ -1.88
XRN1-213ENST00000489241 GATA1P15976 413 aaPredicted RBP3.3□□□□□ -1.88
XRN1-213ENST00000489241 GCFC2P16383 781 aaKnown RBP3.3□□□□□ -1.88
XRN1-213ENST00000489241 ADORA2BP29275 332 aa3.3□□□□□ -1.88
XRN1-213ENST00000489241 NMT1P30419 496 aaKnown RBP3.3□□□□□ -1.88
XRN1-213ENST00000489241 FGF9P31371 208 aaPredicted RBP3.3□□□□□ -1.88
XRN1-213ENST00000489241 EPS15P42566 896 aa3.3□□□□□ -1.88
XRN1-213ENST00000489241 RPL29P47914 159 aaKnown RBP3.3□□□□□ -1.88
XRN1-213ENST00000489241 ATP5OP48047 213 aa3.3□□□□□ -1.88
XRN1-213ENST00000489241 DAP3P51398 398 aaKnown RBP3.3□□□□□ -1.88
XRN1-213ENST00000489241 CDK16Q00536 496 aa3.3□□□□□ -1.88
XRN1-213ENST00000489241 OGDHQ02218 1023 aa3.3□□□□□ -1.88
XRN1-213ENST00000489241 ZFP36L1Q07352 338 aaKnown RBP3.3□□□□□ -1.88
XRN1-213ENST00000489241 SRSF5Q13243 272 aaKnown RBP3.3□□□□□ -1.88
XRN1-213ENST00000489241 PLD1Q13393 1074 aa3.3□□□□□ -1.88
XRN1-213ENST00000489241 GK3PQ14409 553 aa3.3□□□□□ -1.88
XRN1-213ENST00000489241 GLYR1Q49A26 553 aaPredicted RBP3.3□□□□□ -1.88
XRN1-213ENST00000489241 DMRTC1Q5HYR2 192 aa3.3□□□□□ -1.88
XRN1-213ENST00000489241 H2BFWTQ7Z2G1 175 aa3.3□□□□□ -1.88
XRN1-213ENST00000489241 TGIF2LXQ8IUE1 241 aa3.3□□□□□ -1.88
XRN1-213ENST00000489241 MTURNQ8N3F0 131 aa3.3□□□□□ -1.88
XRN1-213ENST00000489241 PAQR8Q8TEZ7 354 aa3.3□□□□□ -1.88
XRN1-213ENST00000489241 MRPS31Q92665 395 aaKnown RBP3.3□□□□□ -1.88
XRN1-213ENST00000489241 MS4A14Q96JA4 679 aa3.3□□□□□ -1.88
XRN1-213ENST00000489241 C12orf42Q96LP6 360 aa3.3□□□□□ -1.88
XRN1-213ENST00000489241 CCT8L2Q96SF2 557 aa3.3□□□□□ -1.88
XRN1-213ENST00000489241 DPH7Q9BTV6 452 aa3.3□□□□□ -1.88
XRN1-213ENST00000489241 CHIAQ9BZP6 476 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms