RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 GTF2IRD2Q86UP8 949 aa12.47□□□□□ -0.41
VTI1A-206ENST00000489142 STK32CQ86UX6 486 aa12.47□□□□□ -0.41
VTI1A-206ENST00000489142 WFDC8Q8IUA0 241 aa12.47□□□□□ -0.41
VTI1A-206ENST00000489142 ARFGAP2Q8N6H7 521 aa12.47□□□□□ -0.41
VTI1A-206ENST00000489142 GLB1L3Q8NCI6 653 aaPredicted RBP12.47□□□□□ -0.41
VTI1A-206ENST00000489142 WDR60Q8WVS4 1066 aa12.47□□□□□ -0.41
VTI1A-206ENST00000489142 TMEM234Q8WY98 164 aa12.47□□□□□ -0.41
VTI1A-206ENST00000489142 ATP6V1G3Q96LB4 118 aa12.47□□□□□ -0.41
VTI1A-206ENST00000489142 TRNT1Q96Q11 434 aaKnown RBP12.47□□□□□ -0.41
VTI1A-206ENST00000489142 ALPK1Q96QP1 1244 aa12.47□□□□□ -0.41
VTI1A-206ENST00000489142 EBF4Q9BQW3 602 aa12.47□□□□□ -0.41
VTI1A-206ENST00000489142 CCDC106Q9BWC9 280 aa12.47□□□□□ -0.41
VTI1A-206ENST00000489142 OR11A1Q9GZK7 315 aa12.47□□□□□ -0.41
VTI1A-206ENST00000489142 SDR39U1Q9NRG7 319 aaPredicted RBP12.47□□□□□ -0.41
VTI1A-206ENST00000489142 ZIM2Q9NZV7 527 aa12.47□□□□□ -0.41
VTI1A-206ENST00000489142 ING1Q9UK53 422 aaPredicted RBP12.47□□□□□ -0.41
VTI1A-206ENST00000489142 EDARQ9UNE0 448 aa12.47□□□□□ -0.41
VTI1A-206ENST00000489142 AGAP5A6NIR3 686 aa12.46□□□□□ -0.41
VTI1A-206ENST00000489142 KRT75O95678 551 aa12.46□□□□□ -0.41
VTI1A-206ENST00000489142 GUSBP08236 651 aa12.46□□□□□ -0.41
VTI1A-206ENST00000489142 LOXP28300 417 aaPredicted RBP12.46□□□□□ -0.41
VTI1A-206ENST00000489142 CRATP43155 626 aa12.46□□□□□ -0.41
VTI1A-206ENST00000489142 ANXA11P50995 505 aaKnown RBP12.46□□□□□ -0.41
VTI1A-206ENST00000489142 MVDP53602 400 aa12.46□□□□□ -0.41
VTI1A-206ENST00000489142 RAC3P60763 192 aa12.46□□□□□ -0.41
VTI1A-206ENST00000489142 RASGEF1BQ0VAM2 473 aa12.46□□□□□ -0.41
VTI1A-206ENST00000489142 FOXD4Q12950 439 aaPredicted RBP12.46□□□□□ -0.41
VTI1A-206ENST00000489142 SYT14P1Q58G82 188 aa12.46□□□□□ -0.41
VTI1A-206ENST00000489142 MRPL2Q5T653 305 aaKnown RBP12.46□□□□□ -0.41
VTI1A-206ENST00000489142 SLC2A7Q6PXP3 512 aa12.46□□□□□ -0.41
VTI1A-206ENST00000489142 LRRC74BQ6ZQY2 392 aa12.46□□□□□ -0.41
VTI1A-206ENST00000489142 TGIF2LYQ8IUE0 185 aa12.46□□□□□ -0.41
VTI1A-206ENST00000489142 MIER2Q8N344 545 aa12.46□□□□□ -0.41
VTI1A-206ENST00000489142 LRRC8CQ8TDW0 803 aa12.46□□□□□ -0.41
VTI1A-206ENST00000489142 S100PBPQ96BU1 408 aa12.46□□□□□ -0.41
VTI1A-206ENST00000489142 MBD6Q96DN6 1003 aa12.46□□□□□ -0.41
VTI1A-206ENST00000489142 ITCHQ96J02 903 aa12.46□□□□□ -0.41
VTI1A-206ENST00000489142 ARL5BQ96KC2 179 aa12.46□□□□□ -0.41
VTI1A-206ENST00000489142 PSD2Q9BQI7 771 aa12.46□□□□□ -0.41
VTI1A-206ENST00000489142 SERINC1Q9NRX5 453 aa12.46□□□□□ -0.41
VTI1A-206ENST00000489142 PRSS50Q9UI38 385 aa12.46□□□□□ -0.41
VTI1A-206ENST00000489142 LIPT1Q9Y234 373 aa12.46□□□□□ -0.41
VTI1A-206ENST00000489142 DSCAMO60469 2012 aa12.45□□□□□ -0.42
VTI1A-206ENST00000489142 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.45□□□□□ -0.42
VTI1A-206ENST00000489142 SULT2B1O00204 365 aa12.45□□□□□ -0.42
VTI1A-206ENST00000489142 GCM2O75603 506 aaPredicted RBP12.45□□□□□ -0.42
VTI1A-206ENST00000489142 PLAUP00749 431 aa12.45□□□□□ -0.42
VTI1A-206ENST00000489142 ADAP00813 363 aa12.45□□□□□ -0.42
VTI1A-206ENST00000489142 BCHEP06276 602 aa12.45□□□□□ -0.42
VTI1A-206ENST00000489142 YES1P07947 543 aa12.45□□□□□ -0.42
VTI1A-206ENST00000489142 GKN3PP0CG01 181 aa12.45□□□□□ -0.42
VTI1A-206ENST00000489142 CD99P14209 185 aa12.45□□□□□ -0.42
VTI1A-206ENST00000489142 RPS4Y1P22090 263 aaKnown RBP12.45□□□□□ -0.42
VTI1A-206ENST00000489142 IDH3AP50213 366 aa12.45□□□□□ -0.42
VTI1A-206ENST00000489142 ADAM8P78325 824 aa12.45□□□□□ -0.42
VTI1A-206ENST00000489142 LRRC74AQ0VAA2 488 aa12.45□□□□□ -0.42
VTI1A-206ENST00000489142 TMPPEQ6ZT21 453 aa12.45□□□□□ -0.42
VTI1A-206ENST00000489142 VRK2Q86Y07 508 aa12.45□□□□□ -0.42
VTI1A-206ENST00000489142 ADGRG3Q86Y34 549 aa12.45□□□□□ -0.42
VTI1A-206ENST00000489142 GABRG1Q8N1C3 465 aa12.45□□□□□ -0.42
VTI1A-206ENST00000489142 WFDC11Q8NEX6 87 aa12.45□□□□□ -0.42
VTI1A-206ENST00000489142 THOC1Q96FV9 657 aaKnown RBP12.45□□□□□ -0.42
VTI1A-206ENST00000489142 C7orf26Q96N11 449 aa12.45□□□□□ -0.42
VTI1A-206ENST00000489142 RMND5AQ9H871 391 aa12.45□□□□□ -0.42
VTI1A-206ENST00000489142 TPT1P8Q9HAU6 139 aa12.45□□□□□ -0.42
VTI1A-206ENST00000489142 TCF7L2Q9NQB0 619 aa12.45□□□□□ -0.42
VTI1A-206ENST00000489142 RLIMQ9NVW2 624 aa12.45□□□□□ -0.42
VTI1A-206ENST00000489142 P2RX2Q9UBL9 471 aa12.45□□□□□ -0.42
VTI1A-206ENST00000489142 CHRNA9Q9UGM1 479 aa12.45□□□□□ -0.42
VTI1A-206ENST00000489142 TMED7-TICAM2A0A0A6YYA0 188 aa12.44□□□□□ -0.42
VTI1A-206ENST00000489142 TMEM72A0PK05 275 aa12.44□□□□□ -0.42
VTI1A-206ENST00000489142 FAM234BA2RU67 622 aa12.44□□□□□ -0.42
VTI1A-206ENST00000489142 ZNF814B7Z6K7 855 aa12.44□□□□□ -0.42
VTI1A-206ENST00000489142 POLR3GO15318 223 aaPredicted RBP12.44□□□□□ -0.42
VTI1A-206ENST00000489142 KLF4O43474 513 aa12.44□□□□□ -0.42
VTI1A-206ENST00000489142 CYTIPO60759 359 aa12.44□□□□□ -0.42
VTI1A-206ENST00000489142 RAMP1O60894 148 aa12.44□□□□□ -0.42
VTI1A-206ENST00000489142 NUDT7P0C024 238 aa12.44□□□□□ -0.42
VTI1A-206ENST00000489142 IL7RP16871 459 aa12.44□□□□□ -0.42
VTI1A-206ENST00000489142 APOBEC1P41238 236 aaKnown RBP12.44□□□□□ -0.42
VTI1A-206ENST00000489142 DSTNP60981 165 aa12.44□□□□□ -0.42
VTI1A-206ENST00000489142 PPP2R2AP63151 447 aa12.44□□□□□ -0.42
VTI1A-206ENST00000489142 AP1ARQ63HQ0 302 aa12.44□□□□□ -0.42
VTI1A-206ENST00000489142 ZNF836Q6ZNA1 936 aa12.44□□□□□ -0.42
VTI1A-206ENST00000489142 GRINAQ7Z429 371 aa12.44□□□□□ -0.42
VTI1A-206ENST00000489142 ATG4DQ86TL0 474 aaPredicted RBP12.44□□□□□ -0.42
VTI1A-206ENST00000489142 PEX5LQ8IYB4 626 aa12.44□□□□□ -0.42
VTI1A-206ENST00000489142 SLC43A2Q8N370 569 aa12.44□□□□□ -0.42
VTI1A-206ENST00000489142 SLC38A5Q8WUX1 472 aa12.44□□□□□ -0.42
VTI1A-206ENST00000489142 DYDC1Q8WWB3 177 aa12.44□□□□□ -0.42
VTI1A-206ENST00000489142 OIT3Q8WWZ8 545 aa12.44□□□□□ -0.42
VTI1A-206ENST00000489142 PLPPR2Q96GM1 343 aa12.44□□□□□ -0.42
VTI1A-206ENST00000489142 TMUB1Q9BVT8 246 aa12.44□□□□□ -0.42
VTI1A-206ENST00000489142 MTHFD2LQ9H903 347 aaPredicted RBP12.44□□□□□ -0.42
VTI1A-206ENST00000489142 BCO1Q9HAY6 547 aa12.44□□□□□ -0.42
VTI1A-206ENST00000489142 EXOSC3Q9NQT5 275 aaKnown RBP12.44□□□□□ -0.42
VTI1A-206ENST00000489142 KLHL9Q9P2J3 617 aa12.44□□□□□ -0.42
VTI1A-206ENST00000489142 TMED7Q9Y3B3 224 aa12.44□□□□□ -0.42
VTI1A-206ENST00000489142 PCDHB14Q9Y5E9 798 aa12.44□□□□□ -0.42
VTI1A-206ENST00000489142 ACANP16112 2415 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms